Details for: upSET

Gene ID: 39551

Symbol: upSET

Ensembl ID: FBgn0036398

Description: upSET

Associated with

Other Information

Genular Protein ID: 3715630817

Symbol: Q9VUB5_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 3146
  • Mass: 336444
  • Checksum: 81EEAC5C308FEC31
  • Sequence:
  • MPMSSHDSVF VEPAVSSSGG GSTSSINRIG VASGPQPPPP HIVIDGSSLS TQAQLRIMQR 
    RMSISTRQIL SASQSQSINQ SQKYAVRTAA GTGALAAGAA SSGSSGQELI NPQIYKIVTT 
    DGSTSNVIID ASAAAPPHNS KLLLSNLTVL SKQAPVQGAA GQQQQQLNYL GAKSLPYVSA 
    SPAKTQQQPQ KFGSISAFKA QHQQQQQHPH ATLQKVTLGS RVATRLQSYV PASPSQIMVQ 
    PAQPKYVNAT ATTIGGNAAL LKKANQKITV KSVSNMSQQQ QQQQQQQQQQ LLQAQQLKTF 
    ITQQQQQQTY KAGAKAKFVK QTTALSIAAL PQQQQQTTYA KQSMVTTSTP AKVTKLNSKY 
    VQQQISLPQG TQLQHKASPN VTGGGYLLQQ SQAAVGGTIK FVNSHGTVIQ QHPQQQQATK 
    RTHYNSSGSS DNEQHAVANS SLITDDVMIV NGTQMTDELS ARILQSMAQK SFSQQQRFHQ 
    VPATGSGNMP PPTQIIYSNS TSNGAAASSP GGNASGNMLL AHYQAAGTKP VSSASFITVT 
    GTPPVTVATT PSVSISSHGF ASGSAAISSY MSSATAARRQ SVSAPSSRAV SLERKQHHQQ 
    LQHDVIGGGR KAPTVIEYYN KHGVNSIVGS SNNLAQSNSM SNLAGPRSNS GSGFATTTPT 
    PATPLHLTPV NVPVHVEAAP PSSPALVKGS SQPPAQPQQQ QQQAHPLGPN QLNANDEELY 
    IEEVRPVPVL TQDLRLQQLH AIMQDHTYAS QQQQQQPQQA AGDTTNPGAA QQVQQPQQWS 
    LGGIGVTVSG SQGTPTAVGG YCSYFGQQIA RSQADDDAHS AISSSSRMGL ASTDIDPGEE 
    TETAPEAEAE DDSVTRCICE LTHDDGYMIC CDKCSAWQHV DCMGIDRQNI PEEYMCELCQ 
    PRAVDKARAR ALQRQKRKEH MLLVATQAAN GAAAVAAGTT LSGGLGSGLP MSEELQHRLA 
    SGLNGGFATG TGMSKKSKKT KENSGSTSTL KKTKKSAVGM GGEKNASGSG TPTGSSGKTS 
    KKSSKRKSKS GGDGSSGGGS SPALTAAEKH AANLRQWIEN YEYAVTNHYS PELRARLHAI 
    QKQPSLLQSI QNTENKALRQ IQQQLSTAGS AEQLEQRAQL IPYAGAKVLI SSVDLSPHAP 
    IHELRGKYML TTQFRTQNPT VNMNTPPPSN YLNSFKAHKT PGQFVFFYQL PGVEAPMQTL 
    RPDGSVPQVA QQPPSYLKGP EVCVDTRTYG NDARFVRRSC RPNAELQHYF EKGTLHLYIV 
    ALTHIRAQTE ITIRHEPHDL TAVEQKKSHA AVIQPTSTRC ACDMGSDCLF ALPLAVQQQL 
    QAPPTQPRSS HRNKAAAAAA AAAAANSAAA IQLTMGLGVG ATVAAGASVL PNSRNRSTSS 
    SGESSQMGLN SPQLGQLNLG FKTSVTATSL TAPVPGVHCN NSGGSSSSSN NSCSVSMSSV 
    LHDSGICTSS SSPSVSIPSP TPTQMQSPTL QQHPQQIPQQ QLSLLQRSPT QQHQQQILAA 
    LPTPMLTPML SPQLPKPAQQ QAHVVLPQSQ QTSLLQQQQS QQSQEPLAVI AAAAAAQQPM 
    ATYFVRQPQQ QQQQQSPKPQ ALVAQQQHVV GAQQQQHFLQ QQQKQQQQQM ADEARMAVSA 
    LQTLHAAPTS HIVSPIKVAA VQQQSQPQQQ QQNTHQQPHN QQAVQQQSNQ LQQQQSQQPN 
    YPQSPQRQQK PQPVQHQPQI VISTGAQAIP ATMPTKLSSP TKSAAPVISN NNITVSAQSS 
    VVGGKKTPAK HPQQQQQQQQ QPVTPVSAAT APAATPSSSE SKEDDVSASS TTTPTTRTPA 
    KDKPKQSRED RKLEAILRAI EKMEKQEARG KKDTRQSSGG KRQASNSPAS PNKRNSSNSI 
    SEDVETPTST NSAAAAAQRR NKKKRKVSRS LNNNTNGLGS GGGSNNKRRK SIVVESDGES 
    HALTNSESED QGQHPQSHHS GSEDQAAGLL LALAHNNSSP NEPFKSPLSQ SHSLPATPAS 
    VSSACLLIEA AMGPLQQQPA PASASPSLAE FKYPPGGAKT KKSLMSSWFQ QAEQQHASGL 
    DSLVQAAMSE INGEREQLQR QPQGESLPAP ALLKVEQFIH QAESTTAVPA REQLHLPLQN 
    NSSVKKRWLR QAISEETTPV DELQQSQNQS VTATPSPQPV PTVSPLANGF STPLKKRRLV 
    VVSNGTNVES DETHIDVIGE PKDEAEENVA MTELKVEIEN HHQEQDDDVD ILRSPSPGTH 
    QIVAEDNLVK IEPEDTSAAA DDVKIDVERE ESQACDKFEE MVKVKREEEE QREKEIKQLQ 
    ERQEHEQPKV EPAPVEPKLE NTVAKAEPKV EPSQEIVSKK EPTKVEPKPG ESLLRSTATV 
    TATPTAATIA ATTLLDVSKV AFKTRPPLKL EDEPQKKKPK LESILPAPVA TVPPVSVPPI 
    PAASNATTSA VTNTAAASLT TTTAPSSTKN LTEHDIQERL LSFHAANISY LQSRNKKATA 
    ALTSASPSQK SNSSSGGSGT ESKKSSKDKD EKRDKEKQLK KSKKEKKKSK DKEKQKAAVN 
    VNSTSQIVDT KKKTTQPSKP DSKSSIAPVL VPPSLPVATA NGKTKHTAYN NVDQQQQQQM 
    RRRTMSMCIT PVTPTPVVTP SPLHGTPPST KKRQTNFEQE LTKPNSQILS SSILLNSSKG 
    LGLPLAAPTV VSVPTAVQQQ QHRKENNHQE ATPASGGPMS LAAAIASGKL NAISRRRESM 
    CGSRQQQALI AAALKKEKKE KKKSKKKDRE KQKHDKQKGK EKEREKDKEK DNKQKTNHIQ 
    KPAHPTTVPA NSMPISAPAP VPVLVPTPVT TPKAAPIPVL ITQPTPSPIH VTQPLVNNCS 
    TKVASLPFYN TIYGKLQDPS TPTSSPIPVT NTMPSLAEYL ESTKSKTTAL SAVKPIGIAA 
    VTPLSSAITP AKVAPSSLEM PPPATTPLKL YTRTASHDPR LNPMLTVPDP TPMPKRKLSI 
    SEYRMRHRPS VDTAPTTPTT PTTPTTPTTP PGSNKDRSFA KPQTINKCSL QSPERFQAAI 
    RERRNSISAH HPQQNAHHNL NNNKGGISNK SGSSSGNHLQ QALGVAGGRL QSKNAIVDPA 
    ATTLSTVNSI LSTAQKLHMF DDKPKGGHFN AAPTLLEQQQ EKMSERSRCL QRTISCDSRV 
    IERLGTGAAA GALEKVTTAS TRRDAV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.