Details for: Phs

Gene ID: 39697

Symbol: Phs

Ensembl ID: FBgn0036522

Description: Phaser

Associated with

  • Gene expression (transcription)
    (R-DME-74160)
  • Generic transcription pathway
    (R-DME-212436)
  • Rna polymerase ii transcription
    (R-DME-73857)
  • Tp53 regulates transcription of cell death genes
    (R-DME-5633008)
  • Tp53 regulates transcription of genes involved in cytochrome c release
    (R-DME-6803204)
  • Transcriptional regulation by tp53
    (R-DME-3700989)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nucleus
    (GO:0005634)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)

Other Information

Genular Protein ID: 197353275

Symbol: Q9VUS0_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VUS0

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 7 Gene3D 1 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 PeptideAtlas 1 Pfam 2 Proteomes 2 Reactome 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 971
  • Mass: 109394
  • Checksum: 26952420EE8DB98B
  • Sequence:
    • MLKMAMANGA NPLQTMKKAN GDEESDESDM EEEEEDEEDE EEDDLPDVAL QIDSEDEAEL 
EAQRIRLVEE EAAKTTKKAE KERQQLQQKQ QRQAQVSNGN EEQLEETQKP SNNKRKARGR 
PKRKISTSSQ ASSASIASSA TLVAAQVLAD QKSRRFIYSC TSCTHHYDDN LILSRHFQLE 
HVEKSKRKRG KTKAAAEEPM VTPPLIIDPL EMGQLKPCAQ LLVQGESVLQ LCLACNSQFV 
DVVRFQEHLS QQHGYFQLLV PKEEPTDLPP HAMVTIPGAL ALNKANAQLQ LPIPAPETPP 
PEQDGKEAPP SNASNDKEDL TMINDMVAVI AAERVKKTSS SKVNKMIIKL PMPKKRGRKR 
TKPESLRDEQ DNAEKTDKKK KLNKEEGQQP VLEPLQAKKT SNQAENGATQ SNNVVKVQQN 
AKGSKKDGTQ SAQKSETNPK HLENAETNSK DNTESVALKE TIHDKQLTID EAGKAGTQKD 
DNSNQKQLDK SEANAGKSKM VDQVHQQMPV ESAKDHQQMT EEPTNSTKRK RGRKERKSPT 
PVLIPLGDKE IKEEPELPER RMRKSRQHVD YVVEIKDEEE DDDEVEEAEV DDDSSATISP 
HNSSTDESFT SIKRESSEES QHNGIGGIHT CNFCGKTFKR FSRMQDHLRL HTGEKPYVCG 
QCGRAFRLKM RLVEHQLRHR AEKAYKCDIC SMPLATKQDL SLHMRHHKND RRYKCDKCNK 
GFVRSSDLSI HVRIHTGEKP YSCDLCGKAF RARQNLVVHR RTHLGDKPIQ CELCDKRFAR 
KIDMRVHMRR HTGEKPYNCD ACQRGYSSRV NLLRHQEREH GIEEQVPGSG QADKKHTKTA 
TENEQENEPK AKAAPRRPRR EKLQQKIAAQ EKLLNDLKRS LSAMPEIPEE SAQVKLDGSG 
QDIPADAGAG HAQVQVTLSM QMEPAPNTED DEEITPEKEN ALSSSMTADG KTKANRKITS 
YFTVVGQQAE I

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.