Details for: roq

Gene ID: 39818

Symbol: roq

Ensembl ID: FBgn0036621

Description: roquin

Associated with

Other Information

Genular Protein ID: 2690710088

Symbol: Q9VV48_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VV48

Database IDs:

ABCD 1 AGR 1 ARBA 7 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EC 1 EMBL 6 EnsemblMetazoa 3 FlyBase 2 GO 11 Gene3D 3 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 7 KEGG 1 MINT 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PDB 2 PDBsum 1 PROSITE 5 PROSITE-ProRule 1 PaxDb 1 Pfam 4 Proteomes 2 RefSeq 3 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 2 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

PubMed ID: 28165457

Title: A CAF40-binding motif facilitates recruitment of the CCR4-NOT complex to mRNAs targeted by Drosophila Roquin.

PubMed ID: 28165457

DOI: 10.1038/ncomms14307

Sequence Information:

  • Length: 819
  • Mass: 90377
  • Checksum: 33D429076EDE7E2E
  • Sequence:
    • MPIQAPSWTD FLNCPICCNE FAASQRCPVS LGCGHTICKL CLTTLYNRQC PFDQTVIVSD 
IDNLPINHAL LQLVKDSELL ELAPPPPSVQ KLEPEHLKCY QLGQRCIEEL ALHLKSFLNL 
NGNGNLLTRP MLRKLVTLVN CQLMEEEGRV RALRAARSLG ERTVTELILQ HQNPQQLSSN 
LWAAVRTRGC QFLGPAMQEE VLKLVLLALE EGSALSRKVL VMFVVQRLEP KFPQASKTSI 
GHVVQLLYRA SCFKVSKREA DSSLMQLKEE FRTYDALRRE HDAQIVQIAT EAGLRIAPEQ 
WSSLLYGDVM HKSHMQSIID KLQTPSSFAQ SVQELVIALQ RTSDPAKLSS LHHHLKYLAN 
IDPCAEVAPW SVLAEALDAV RHSVVGLVNF LQHHGVRKAQ DGISGGGSGG TTNSNPKYKI 
SLCRDLNVRR VCPRGSSCTF AHSQEEVERY RARNRGKHMK TPLALQGPPA VGVGAIKKPL 
GEQEGPPLGN MPPMLPMSPM HYMGSPRGYL DPSLGLSPGG GLPPSHHSPI TRLIVPSRYD 
SRFSGFGGGT PRIPSPREYQ ANPVAPTQRN ANPPNFSVNS NLHKGYMLPA SGGDVFHLAN 
PWEQAYLAQQ QHPPQHPQQQ QPPSSKPNPS RPLSILPATA DTSFFEKKPP NSVSIDLDRV 
PEVNVDAVPL FRRSNNNHNN NNSNSHNNNN NNHGSSLLFW NNTGKDSANF VRSDSILDDD 
ASTFDVPTGS SMLSIYGPIC PKSSTTGNWN NFDLGYGGFK SDRNDSFNAN KQQQPMWGRK 
PQLMSEDSFE GGIDSGMMLQ LEKNLVDIVD PDDSGIKVD

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.