Details for: Pcif1

Gene ID: 40295

Symbol: Pcif1

Ensembl ID: FBgn0037021

Description: Phosphorylated CTD-interacting factor 1

Associated with

  • Mrna (2'-o-methyladenosine-n6-)-methyltransferase activity
    (GO:0016422)
  • Nucleus
    (GO:0005634)
  • Rna polymerase ii c-terminal domain binding
    (GO:0099122)
  • Rna polymerase ii c-terminal domain phosphoserine binding
    (GO:1990269)
  • Wing disc dorsal/ventral pattern formation
    (GO:0048190)

Other Information

Genular Protein ID: 3354462442

Symbol: Q9VPB7_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VPB7

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 2 PaxDb 1 PeptideAtlas 1 Pfam 2 Proteomes 2 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 920
  • Mass: 100290
  • Checksum: B1BA216E741D130B
  • Sequence:
    • MAANNNNSII HNLGAGTEGL LSSVIASTGT PGMGSSPVPS RASSSSASSA AQSAWDQLTA 
SASNNMSPSP TAGAPTVTGP ILPDNLGVGA GSSPVASCSS PSTPTKTHAP SPLESMGHTP 
QGPPTLGPGG YGEELTAELV NQGWRKFWSK RENRPYYWNK VTGESLWEMP GTRPFDPLTD 
PLGICHAGGP TPIIPNMHQQ QQHQHHHLKR RPSDDMHIHP NQHHMGGGPP MKKFVLAGPW 
DLEVCTNAVI VERPPTLLPQ PHPEVEALRA AFTMKLLKTY EDLCMRRENI KAPRDSFNRW 
LMERKVIDTG CDPLLPSSCM PEISSSMYRE IMSDIPIKIV KPKFTGDARK QLSRYAEAAK 
QIIESRSAPA ESKKVVKWNV EDTFQWLRRT VGASYEDFQD RLAHLKRQCE PHLVETVKSS 
VETLCVKIYH LSADHARKIR ERHSQLLKEH GIPEPTPPPP PPHLKKVWCY PIQFAVPSPR 
MPTIEYLQDR DHMIIKYTPA TINQPDAQYI NLTYLQKLEQ LYRHNCFDDK KFDLFIGRVW 
CLLKRYQTFL GNALNSSQEA ELTQAALPVP VFECLHRQFG VSFECFASPF NSYFRQYCSA 
FADTDAYFGS RGPFLDFKPV SGSFQVNPPH CEELIEASLL HIDKLLTDTM EPLSFIVFLP 
EWKSISKLDD SMYKRRSMVV LGMAHEYRHG YQHMLQKSDV LIKCMQGTQV VWLQNSAGYA 
RWGPNEIRVE ALREAFRPQR DRERERAAAA AAAAGVTSSQ QSPSTPPSAA STAPTTNSCT 
ISGVNSNSSS TATTTSTSSS PSLTTTSSSM SPLSPHTPTG NPPPQFPMTI SNTSSSSNLV 
AASPTMSVQS DCSSPSSSTM SLSPAPASGG YPDGVTSATA AAVSITATTT TSAAGAGSAF 
GQANSISSSA STQAVINSAV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.