Details for: CG8478

Gene ID: 41194

Symbol: CG8478

Ensembl ID: FBgn0037746

Description: uncharacterized protein

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Nucleus
    (GO:0005634)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 1268255043

Symbol: E1JIH4_DROME

Name: N/A

UniProtKB Accession Codes:

E1JIH4

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 4 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMART 1 STRING 1 SUPFAM 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 576
  • Mass: 63116
  • Checksum: 8119CD275CD68902
  • Sequence:
    • MDDSRRTMAG KFHFQQIDSR SSSIMTNDES VSMYLSFDAE DTLSNAKWQS ALVTQNSQFL 
EVHNSKVEVN TDDKDLRRTI LKDLHQLTIG EPDQNSPLRP FDKSILNRHN ALCSTPSKGN 
ISTETQTPQI MESIDLTQID DKENTQPEGC GGDNSTLSSS VDVTANTVKA NTLKTGDATM 
DNVSLQEAAK TPAPSQVYPL SANVVLENIT EVSNEGVSML VSPAGAEKEV AHVNEVVNEV 
SELIAKALKI SADSVKPATS KLKVEAGKKR QSMSSTYSGA ALPRPRRSYL PTTTAETRTY 
SFKQRMSVVV KTTLNSPARK RSVGGGVSLS RRSCLPVSKL TKSSIRKSLA VTSVRSPEKI 
ASKPAKTSTK SIPEKVFSCK NCSTTFRVKS LLDVHMRMHD PVDNGANTLK RLNSNPVAAG 
VSKNRCKFCD KNFALERALH IHLMQNCDKI PPSEKRKLEF TELNHEKKAQ LPKIGGTSGI 
NHPMTMPQKP QQRISTIPKL APSQGTQSMA PPSVKKIPKN VAHAGVYRTP TKTVPCHICK 
QSFRSILEFT NHSLTVHGNN QLKKMTGRED AQSAHD

Genular Protein ID: 2956940716

Symbol: Q9VH75_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VH75

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 IntAct 1 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 SAM 1 SMART 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 572
  • Mass: 62556
  • Checksum: ADFADEA4D02546C2
  • Sequence:
    • MDDSRRTMAG KQIDSRSSSI MTNDESVSMY LSFDAEDTLS NAKWQSALVT QNSQFLEVHN 
SKVEVNTDDK DLRRTILKDL HQLTIGEPDQ NSPLRPFDKS ILNRHNALCS TPSKGNISTE 
TQTPQIMESI DLTQIDDKEN TQPEGCGGDN STLSSSVDVT ANTVKANTLK TGDATMDNVS 
LQEAAKTPAP SQVYPLSANV VLENITEVSN EGVSMLVSPA GAEKEVAHVN EVVNEVSELI 
AKALKISADS VKPATSKLKV EAGKKRQSMS STYSGAALPR PRRSYLPTTT AETRTYSFKQ 
RMSVVVKTTL NSPARKRSVG GGVSLSRRSC LPVSKLTKSS IRKSLAVTSV RSPEKIASKP 
AKTSTKSIPE KVFSCKNCST TFRVKSLLDV HMRMHDPVDN GANTLKRLNS NPVAAGVSKN 
RCKFCDKNFA LERALHIHLM QNCDKIPPSE KRKLEFTELN HEKKAQLPKI GGTSGINHPM 
TMPQKPQQRI STIPKLAPSQ GTQSMAPPSV KKIPKNVAHA GVYRTPTKTV PCHICKQSFR 
SILEFTNHSL TVHGNNQLKK MTGREDAQSA HD

Genular Protein ID: 2443113811

Symbol: Q961C3_DROME

Name: N/A

UniProtKB Accession Codes:

Q961C3 Q8INN1

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 DNASU 1 EMBL 6 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 2 Gene3D 1 GeneTree 1 GenomeRNAi 1 IntAct 1 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 2 SAM 1 SMART 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 571
  • Mass: 62428
  • Checksum: 1876B6B4884D2BF5
  • Sequence:
    • MDDSRRTMAG KIDSRSSSIM TNDESVSMYL SFDAEDTLSN AKWQSALVTQ NSQFLEVHNS 
KVEVNTDDKD LRRTILKDLH QLTIGEPDQN SPLRPFDKSI LNRHNALCST PSKGNISTET 
QTPQIMESID LTQIDDKENT QPEGCGGDNS TLSSSVDVTA NTVKANTLKT GDATMDNVSL 
QEAAKTPAPS QVYPLSANVV LENITEVSNE GVSMLVSPAG AEKEVAHVNE VVNEVSELIA 
KALKISADSV KPATSKLKVE AGKKRQSMSS TYSGAALPRP RRSYLPTTTA ETRTYSFKQR 
MSVVVKTTLN SPARKRSVGG GVSLSRRSCL PVSKLTKSSI RKSLAVTSVR SPEKIASKPA 
KTSTKSIPEK VFSCKNCSTT FRVKSLLDVH MRMHDPVDNG ANTLKRLNSN PVAAGVSKNR 
CKFCDKNFAL ERALHIHLMQ NCDKIPPSEK RKLEFTELNH EKKAQLPKIG GTSGINHPMT 
MPQKPQQRIS TIPKLAPSQG TQSMAPPSVK KIPKNVAHAG VYRTPTKTVP CHICKQSFRS 
ILEFTNHSLT VHGNNQLKKM TGREDAQSAH D

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.