Rrp6 | FBgn0038269 | NCBI 41798

Details for: Rrp6

Gene ID: 41798

Symbol: Rrp6

Ensembl ID: FBgn0038269

Description: Rrp6

Associated with

Major pathway of rrna processing in the nucleolus and cytosol
(R-DME-6791226)
Metabolism of rna
(R-DME-8953854)
Rrna processing
(R-DME-72312)
Rrna processing in the nucleus and cytosol
(R-DME-8868773)
3'-5'-rna exonuclease activity
(GO:0000175)
3'-5' exonuclease activity
(GO:0008408)
Chromosome segregation
(GO:0007059)
Defense response to virus
(GO:0051607)
Exonucleolytic trimming to generate mature 3'-end of 5.8s rrna from tricistronic rrna transcript (ssu-rrna, 5.8s rrna, lsu-rrna)
(GO:0000467)
Histone mrna catabolic process
(GO:0071044)
Mitotic cell cycle
(GO:0000278)
Nuclear exosome (rnase complex)
(GO:0000176)
Nuclear lamina
(GO:0005652)
Nuclear polyadenylation-dependent antisense transcript catabolic process
(GO:0071040)
Nuclear polyadenylation-dependent cut catabolic process
(GO:0071039)
Nuclear polyadenylation-dependent rrna catabolic process
(GO:0071035)
Nuclear polyadenylation-dependent snorna catabolic process
(GO:0071036)
Nuclear polyadenylation-dependent snrna catabolic process
(GO:0071037)
Nuclear polyadenylation-dependent trna catabolic process
(GO:0071038)
Nuclear rna surveillance
(GO:0071027)
Nucleic acid binding
(GO:0003676)
Nucleobase-containing compound metabolic process
(GO:0006139)
Nucleolus
(GO:0005730)
Nucleotide binding
(GO:0000166)
Nucleus
(GO:0005634)
Polyadenylation-dependent snorna 3'-end processing
(GO:0071051)
Regulation of gene expression
(GO:0010468)
Rna processing
(GO:0006396)
Single-stranded rna binding
(GO:0003727)

Other Information

Proteins

EXOSX_DROME

Genular Protein ID: 2470487746

Symbol: EXOSX_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VFF3 B3DN45 H9ZYN8

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 19225159

Title: Core exosome-independent roles for Rrp6 in cell cycle progression.

PubMed ID: 19225159

DOI: 10.1091/mbc.e08-08-0825

PubMed ID: 21289297

Title: The incorporation of 5-fluorouracil into RNA affects the ribonucleolytic activity of the exosome subunit Rrp6.

PubMed ID: 21289297

DOI: 10.1158/1541-7786.mcr-10-0084

PubMed ID: 25632158

Title: RRP6/EXOSC10 is required for the repair of DNA double-strand breaks by homologous recombination.

PubMed ID: 25632158

DOI: 10.1242/jcs.158733

PubMed ID: 26389589

Title: An Interaction between RRP6 and SU(VAR)3-9 Targets RRP6 to Heterochromatin and Contributes to Heterochromatin Maintenance in Drosophila melanogaster.

PubMed ID: 26389589

DOI: 10.1371/journal.pgen.1005523

Sequence Information:

Length: 900
Mass: 102918
Checksum: A09C6DD6F8BB9C0E
Sequence:

MPRTPKRVHQ EAKEESAQAD QPPKKSASED VEAFTNKGFK NAIAATKAAN AFPQGTARAL 
YLSYPGYARV MEDLTQRVVA LIGNVLHSKD IKGDIKKRQP EEQFEMVQEC NDVLFERITT 
NLDIKGGLRR NTQQVVEAQV DVMSSSTSIE PAVASPQTQG TPKAGSWNRT TGTPQRSMVS 
ARLFTAKNIV RPQTQFREPV DNSAQNPFVP RLKEKPNSLK PLALLPEYDD AGNVQSYLHP 
YEFELLKFQP PEEQFQKQKP VLPALMAETE LMVVDTVEKL KQALEELRQA PQIAIDVEHH 
SYRTFMGITC LVQMSTRSKD YIFDTLILRD DMHILNLVLT DPKKLKILHG ADLDIEWLQR 
DLSLYIVNMF DTHRAAKALN MARLSLAYLL KHYLDLDVDK SLQLADWRMR PLPQQLVDYA 
RQDTHFLIYV YGRMTNDLLQ QHAEPGLLGS VYQQSTDVCK KRYNKPHIGP ESHLDLVRKT 
KRSFDNRQLY ALRGIFEWRD ATARSEDESY GYVLPNHMML QIAESLPREM QGILACCNPI 
PPLVRQQLHT LHQIVLKARD QPLVKPILEA HSSTQAALPP STKDFSSKLY CPHDFSQLEE 
IRDDLPTLLK RNSTTGKLEV PNKEEVAKVD PTLAAPAMAL FEKQSKPTQE EEQRWAHLRK 
ESQTMRMPYK RYLAILPLMV QLKADQLARE RSELQKRQLC PAAPTVEQNI KLEAHAIGKE 
DDDMYSVPLK EQLKRKHPQA NVKTDPEQQP TASKRPRKDE NSQTKPPVKI EPVEKVQQAL 
GESDDEVVEV PIERQATEPP KPSPAQNNRK QKKNQFQRGF KAKNRGNHPQ SSSQQVPQHK 
GTGNFDYKNV DFRQFKGGAQ RARGTEIKQQ IRGKNRPNNR NNKQFNKLFT FSNVRKEGKK

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Rrp6

Associated with

Other Information

The genome sequence of Drosophila melanogaster. PubMed ID: 10731132

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. PubMed ID: 12537572

Core exosome-independent roles for Rrp6 in cell cycle progression. PubMed ID: 19225159

The incorporation of 5-fluorouracil into RNA affects the ribonucleolytic activity of the exosome subunit Rrp6. PubMed ID: 21289297

RRP6/EXOSC10 is required for the repair of DNA double-strand breaks by homologous recombination. PubMed ID: 25632158