Details for: cal1

Gene ID: 42065

Symbol: cal1

Ensembl ID: FBgn0038478

Description: chromosome alignment defect 1

Associated with

Other Information

Genular Protein ID: 2844381909

Symbol: Q9VEN2_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VEN2

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 8 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PDB 5 PDBsum 3 PaxDb 1 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMR 1 STRING 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 32134144

Title: Structural basis for centromere maintenance by Drosophila CENP-A chaperone CAL1.

PubMed ID: 32134144

DOI: 10.15252/embj.2019103234

Sequence Information:

  • Length: 979
  • Mass: 109539
  • Checksum: 25508C667030FD40
  • Sequence:
    • MANAVVDEET LEAMVYERSK AWSSKMADFA SLEDGMEIDV AEFDNLFHGE DEDPDLDDVA 
KEAVEDNVPD EAKLEMGHIN ATSVTELTLI LCANEDNEAK AEIEEILNQT VPVVEEHKRK 
WREAGLDRIL DTFDEKQIEH HVGRWMRRHN SVYLEASPPK YLPPHHNSIS DESDESMHSI 
DTARYIQQSR RRNAHMTNKN MTTIKMYRKH SHKRDELRAK YAYGDEQEHR HHMQAVLLRR 
RERERQLAYL ASTPMQCVYS SGHHMRRKNL RKRRINSWMF DSASSSEEDT SFGGCDCHSC 
RRHYALSRSV YQSCPYGRGQ REYHHRQMAS RTMHTMRRQH TFDMEMDLRP RLPENECSCC 
NSDRLCSNVI HIANSSTEEW VVENRSNHLT QETQEKTRKQ KHQPMDARKV SHQPVCSKGH 
EQKPLSSKAT SVSKLVLSKE KYMQMFDSES SDEDNALAKK GLLCCSDKKK GMTFPTPNAA 
GKITHPTSSA KKAIRKEARP NGLAQIQEEG PTATNSPIES TYLPVAHMKS VSIDGSSGTS 
ATFESPAKKA PKRGIRETSP LNGNELQQLI STIPIADEKA SSLMEKVDNC IGRESFDDRN 
KDFMHMENSS TKTAVEKSTK QKRVSGKKSE IPKSIITNNE ILEKNSTETL SEKQVAAKAK 
KQSVRKTGAT GKPSTSRLKK SEKTKTTSSV TSTSKLEQVR EEESDVSSEV LAKPKPQCST 
TASILKQGGD GASNSEDDLQ IALAMSKATY KEEQQKRKKT KREPSNKQPQ SPAEKSMTVF 
NNQSVACNST ALANDTACYR VLPKRRGVKR AAAVSTTEEK TATNSSSSPT SSLEEMGSPT 
GGDPDCTVVT STTGCEPPAS ERQEIPATIK ITKRGILLHS PSAPEGASFT LTEQGLGKII 
GERWARKYLK YHIGSRSFDS RHSVYYQPTP QLAAALSAPQ DAQNIGNISG SSASDDDIFE 
QINRYGTVYS ILENNSGDK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.