Details for: Ssdp

Gene ID: 42177

Symbol: Ssdp

Description: Sequence-specific single-stranded DNA-binding protein

Associated with

  • Embryonic pattern specification
    (GO:0009880)
  • Nucleus
    (GO:0005634)
  • Positive regulation of canonical wnt signaling pathway
    (GO:0090263)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Sequence-specific single stranded dna binding
    (GO:0098847)
  • Single-stranded dna binding
    (GO:0003697)

Other Information

Genular Protein ID: 3343074955

Symbol: Q9VEB9_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VEB9

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 EMBL 6 EnsemblMetazoa 3 ExpressionAtlas 1 FlyBase 2 GO 4 GeneTree 1 GenomeRNAi 1 HOGENOM 1 IntAct 1 InterPro 2 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PDB 2 PDBsum 1 PRINTS 1 PROSITE 1 PaxDb 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 3 SAM 1 SMART 1 SMR 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

PubMed ID: 31570581

Title: Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome.

PubMed ID: 31570581

DOI: 10.1073/pnas.1912705116

Sequence Information:

  • Length: 445
  • Mass: 45105
  • Checksum: F0997BF72AE4D0AD
  • Sequence:
    • MYGKSKTSAV PSDAQAREKL ALYVYEYLLH VGAQKAAQTF LSEIRWEKNI TLGEPPGFLH 
TWWCVFWDLY CAAPERRDQC DHSSEAKAFH DYGFVSSGYG VNGIGPGGPH NAGGPAPSPL 
GQMPPGGDGG PMGPGGPMGP NFFPNSTMRP SPPTHASSPQ PPPSQMMPGQ PPFMGGPRYP 
GGPRPGVRMQ GMGNEFNGPP GQPMMPNSMD PTRPGGGMGP MNPRMNPPRG PGGMGPMGYG 
GPGGMRGPAP GPGGMPPMGM GGAGGRPPQW QPNASAPLNA YSSSSPGNYG PGSNGPPGPG 
TPIMPSPQDN TQGGPVGGPG DSMYALMKPE FPMGGGPDGG GGGGGPGGMG PMGGGPNSMG 
PVLNGGGGPD GSGLDGMKNS PANGGPGTPR EDSGSGMGDY NLGGFGGPGE NDQTESAAIL 
KIKESMHEEA KRFEKDTDHP DYFMP

Genular Protein ID: 3011355135

Symbol: A0A0B4KGW6_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4KGW6

Database IDs:

AGR 1 ARBA 3 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 ComplexPortal 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 7 GeneTree 1 GenomeRNAi 1 InParanoid 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 SAM 1 SMART 1 STRING 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 509
  • Mass: 51274
  • Checksum: B6C82B07697E54FE
  • Sequence:
    • MYGKSKTSAV PSDAQAREKL ALYVYEYLLH VGAQKAAQTF LSEIRWEKNI TLGEPPGFLH 
TWWCVFWDLY CAAPERRDQC DHSSEAKAFH DYGFVSSGYG VNGIGPGGPH NAGGPAPSPL 
GQMPPGGDGG PMGPGGPMGP NFFPNSTMRP SPPTHASSPQ PPPSQMMPGQ PPFMGGPRYP 
GGPRPGVRMQ GMGNEFNGPP GQPMMPNSMD PTRPGGGMGP MNPRMNPPRG PGGMGPMGYG 
GPGGMRGPAP GPGGMPPMGM GGAGGRPPQW QPNASAPLNA YSSSSPGNYG PGSNGPPGPG 
TPIMPSPQDN TQGGPVGGPG DSMYALMKPE FPMGGGPDGG GGGGGPGGMG PMGGGPNSMG 
PVLNGGGGPD GSGLDGMKNS PANGGPGTPR EDSGSGMGDY NLGGFGGPGE NDQTESAAIL 
KIKESMHEEA KRFEKDTDHP DYFMPXQHHQ QQQQQHQQHL NTVAAAVAAV VAAAASNGSA 
AGSSSAASIA AAALGAAASN LLSNGNNNF

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.