Details for: trem

Gene ID: 42392

Symbol: trem

Ensembl ID: FBgn0038767

Description: trade embargo

Associated with

  • Gene expression (transcription)
    (R-DME-74160)
  • Generic transcription pathway
    (R-DME-212436)
  • Rna polymerase ii transcription
    (R-DME-73857)
  • Chromatin
    (GO:0000785)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Meiotic cell cycle
    (GO:0051321)
  • Meiotic dna double-strand break formation involved in reciprocal meiotic recombination
    (GO:0010780)
  • Meiotic dna double-strand break processing involved in reciprocal meiotic recombination
    (GO:0010705)
  • Nucleus
    (GO:0005634)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Zinc ion binding
    (GO:0008270)

Other Information

Genular Protein ID: 866202454

Symbol: Q9VDQ4_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VDQ4

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChEBI 4 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 9 Gene3D 2 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 5 PROSITE-ProRule 2 PaxDb 1 PeptideAtlas 1 Pfam 3 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 439
  • Mass: 50327
  • Checksum: 236D6C4046B64EA2
  • Sequence:
    • MKTESNEKWV VCRVCLNNPS EGEELLHDIF SETASTRLDQ MLHICAGIPV SLDDNFPDKM 
CSKCVRCLRL CYKFRLTCQR SHQHIMDMLD REASNANAAG EGDLLSIAED LSVESVLKSW 
EDYASQLDGG MKVEGEEDQQ HQVITYVVED GDTDDTNMFD VHDPTQPVPN EIEEAETYAE 
YEEYELLTNE NSPEIAQEKG STGTDVATEE PPEEEIAEDI LDSDEDYDPT HAKPEKCDRS 
GRKPVAYHKN SPKVETFKKK VGRKPRNKLS TYICDVCGNI YPTQARLTEH MKFHSGVKPH 
ECEICGRGFV QNQQLVRHMN THTGNRPYKC NYCPAAFADR STKTKHHRIH TKERPYVCDV 
CSRTFTYSDN LKFHKMIHTG EKPHVCDLCG KGFVKAYKLR LHRETHNRRI TWRNDAEEST 
KAEDVKGETP EFLNELPKE

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.