Details for: Optix

Gene ID: 44108

Symbol: Optix

Ensembl ID: FBgn0025360

Description: optix

Associated with

  • Compound eye development
    (GO:0048749)
  • Compound eye morphogenesis
    (GO:0001745)
  • Compound eye photoreceptor cell differentiation
    (GO:0001751)
  • Dendrite morphogenesis
    (GO:0048813)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Progression of morphogenetic furrow involved in compound eye morphogenesis
    (GO:0007458)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific dna binding
    (GO:0043565)
  • Transcription regulator complex
    (GO:0005667)

Other Information

Genular Protein ID: 1457394185

Symbol: OPTIX_DROME

Name: Protein Optix

UniProtKB Accession Codes:

Q95RW8 O76291 Q8MKN3 Q9UA64 Q9V355

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 7 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 1 GO 11 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OMA 1 PANTHER 2 PRO 1 PROSITE 1 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 2 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10381573

Title: Six class homeobox genes in Drosophila belong to three distinct families and are involved in head development.

PubMed ID: 10381573

DOI: 10.1016/s0925-4773(99)00045-3

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537569

Title: A Drosophila full-length cDNA resource.

PubMed ID: 12537569

DOI: 10.1186/gb-2002-3-12-research0080

PubMed ID: 9724757

Title: The optx2 homeobox gene is expressed in early precursors of the eye and activates retina-specific genes.

PubMed ID: 9724757

DOI: 10.1073/pnas.95.18.10643

Sequence Information:

  • Length: 487
  • Mass: 52419
  • Checksum: ECA9FD59F171E599
  • Sequence:
    • MAVGPTEGKQ PPSESFSPTH HQIIAPSPIL AVPTLAFSAA QVEIVCKTLE DSGDIERLAR 
FLWSLPVALP NMHEILNCEA VLRARAVVAY HVGNFRELYA IIENHKFTKA SYGKLQAMWL 
EAHYIEAEKL RGRSLGPVDK YRVRKKFPLP PTIWDGEQKT HCFKERTRSL LREWYLQDPY 
PNPTKKRELA KATGLNPTQV GNWFKNRRQR DRAAAAKNRI QHSQNSSGMG CRSRRADGAA 
SPTPSDSSDS DISLGTHSPV PSSLQLQHSP GSTSNGANDR EESLSVDDDK PRDLSGSLPL 
PLSLPLPLAS PTHTPPQLPP GYGGGAGAGP GGPLTGPGCL PPFKLDAATS LFSAGCYLQS 
FSNLKEMSQQ FPIQPIVLRP HPQLPQSLAL NGASGGPPLH HPAYAAAYSV ECVPGGHGPP 
HPPPKLRINS PEKLNSTAVA AAASVGGGGG NQHHEPTTTG YHHSGQLMLH RPFSTSPELK 
HSAPEIT

Genular Protein ID: 1880898547

Symbol: A0A0B4KEE9_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4KEE9

Database IDs:

AGR 1 ARBA 3 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 2 Gene3D 1 GeneTree 1 GenomeRNAi 1 InterPro 3 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 Pfam 2 PhylomeDB 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 492
  • Mass: 53077
  • Checksum: 097CE6FEF55CA9FD
  • Sequence:
    • MAVGPTEGKQ PPSESFSPTH HQIIAPSPIL AVPTLAFSAA QVEIVCKTLE DSGDIERLAR 
FLWSLPVALP NMHEILNCEA VLRARAVVAY HVGNFRELYA IIENHKFTKA SYGKLQAMWL 
EAHYIEAEKL RGRSLGPVDK YRVRKKFPLP PTIWDGEQKT HCFKERTRSL LREWYLQDPY 
PNPTKKRELA KATGLNPTQV GNWFKNRRQR DRAAAAKNRI QHSQNSSGMG CRSRRADGAA 
SPTPSDSSDS DISLGTHSPV PSSLQLQHSP GSTSNGANDR EESLSVDDDK PRDLSGSLPL 
PLSLPLPLAS PTHTPPQLPP GYGGGAGAGP GGPLTGPGCL PPFKLDAATS LFSAGCYLQS 
FSNLKEMSQQ FPIQPIVLRP HPQLPQSLAL NGASGGPPLH HPAYAAAYSV ECVPGGHGPP 
HPPPKLRINS PEKLNSTAVA AAASVGGGGG NQHHEPTTTG YHHSGQLMLH RPFSTSPELK 
HSAPEITXYQ RV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.