Details for: ASTN1

Gene ID: 460

Symbol: ASTN1

Ensembl ID: ENSG00000152092

Description: astrotactin 1

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: 4.5808
    Cell Significance Index: 109.8600
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 3.8058
    Cell Significance Index: 233.9200
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 3.2334
    Cell Significance Index: 1159.7800
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 2.9063
    Cell Significance Index: 583.0100
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 2.8790
    Cell Significance Index: 63.0400
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: 2.7235
    Cell Significance Index: 183.1300
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 2.5276
    Cell Significance Index: 31.3500
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: 2.2280
    Cell Significance Index: 98.5500
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: 2.2210
    Cell Significance Index: 84.1100
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: 1.9238
    Cell Significance Index: 54.9000
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.8801
    Cell Significance Index: 1300.3600
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 1.2482
    Cell Significance Index: 70.0400
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 0.2397
    Cell Significance Index: 451.3900
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: 0.2311
    Cell Significance Index: 3.9600
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.0062
    Cell Significance Index: 3.9200
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: -0.0397
    Cell Significance Index: -73.1300
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: -0.0483
    Cell Significance Index: -74.2800
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: -0.0555
    Cell Significance Index: -75.5000
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: -0.0647
    Cell Significance Index: -1.2800
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0868
    Cell Significance Index: -63.6200
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0983
    Cell Significance Index: -74.3700
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0996
    Cell Significance Index: -73.7700
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.1195
    Cell Significance Index: -74.6500
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: -0.1198
    Cell Significance Index: -65.4000
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: -0.1304
    Cell Significance Index: -59.2000
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.1383
    Cell Significance Index: -78.0100
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.1716
    Cell Significance Index: -24.9500
  • Cell Name: hippocampal interneuron (CL1001569)
    Fold Change: -0.1727
    Cell Significance Index: -2.2400
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.1907
    Cell Significance Index: -54.8700
  • Cell Name: neural cell (CL0002319)
    Fold Change: -0.2006
    Cell Significance Index: -2.3400
  • Cell Name: hippocampal astrocyte (CL0002604)
    Fold Change: -0.2060
    Cell Significance Index: -2.8800
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.2581
    Cell Significance Index: -16.2700
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: -0.3292
    Cell Significance Index: -65.3400
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: -0.3450
    Cell Significance Index: -62.2000
  • Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
    Fold Change: -0.3704
    Cell Significance Index: -5.3100
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.3740
    Cell Significance Index: -78.7800
  • Cell Name: midget ganglion cell of retina (CL4023188)
    Fold Change: -0.3869
    Cell Significance Index: -4.0300
  • Cell Name: glutamatergic neuron (CL0000679)
    Fold Change: -0.4371
    Cell Significance Index: -4.7600
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: -0.4521
    Cell Significance Index: -9.6000
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.4533
    Cell Significance Index: -77.4100
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: -0.4624
    Cell Significance Index: -63.5000
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -0.4645
    Cell Significance Index: -9.3300
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: -0.5085
    Cell Significance Index: -62.5200
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.5147
    Cell Significance Index: -66.5000
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.5811
    Cell Significance Index: -60.5100
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: -0.6060
    Cell Significance Index: -71.4700
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.6295
    Cell Significance Index: -64.3000
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -0.6341
    Cell Significance Index: -20.7600
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.6810
    Cell Significance Index: -78.0200
  • Cell Name: neuron (CL0000540)
    Fold Change: -0.6826
    Cell Significance Index: -6.4700
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -0.7206
    Cell Significance Index: -22.9500
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: -0.8415
    Cell Significance Index: -14.5500
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: -0.8452
    Cell Significance Index: -64.8600
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.8931
    Cell Significance Index: -66.5600
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: -0.9840
    Cell Significance Index: -21.2600
  • Cell Name: OFF midget ganglion cell (CL4033047)
    Fold Change: -0.9840
    Cell Significance Index: -12.2700
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.9923
    Cell Significance Index: -52.1000
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: -1.0025
    Cell Significance Index: -28.0200
  • Cell Name: cerebral cortex neuron (CL0010012)
    Fold Change: -1.1099
    Cell Significance Index: -10.5600
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: -1.1442
    Cell Significance Index: -73.8200
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: -1.1786
    Cell Significance Index: -41.2900
  • Cell Name: L6 intratelencephalic projecting glutamatergic neuron of the primary motor cortex (CL4023050)
    Fold Change: -1.1964
    Cell Significance Index: -15.9600
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -1.2521
    Cell Significance Index: -65.2200
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: -1.3007
    Cell Significance Index: -34.8500
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: -1.3373
    Cell Significance Index: -27.9100
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -1.3501
    Cell Significance Index: -35.5000
  • Cell Name: eukaryotic cell (CL0000255)
    Fold Change: -1.3595
    Cell Significance Index: -59.1100
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: -1.3799
    Cell Significance Index: -34.4200
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -1.3876
    Cell Significance Index: -65.2200
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: -1.4098
    Cell Significance Index: -17.7900
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -1.4312
    Cell Significance Index: -66.7300
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: -1.4553
    Cell Significance Index: -65.9600
  • Cell Name: ON midget ganglion cell (CL4033046)
    Fold Change: -1.7201
    Cell Significance Index: -21.7100
  • Cell Name: stratified epithelial cell (CL0000079)
    Fold Change: -1.7620
    Cell Significance Index: -64.6800
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: -1.8029
    Cell Significance Index: -21.5600
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: -1.8060
    Cell Significance Index: -13.1300
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -1.8412
    Cell Significance Index: -63.9800
  • Cell Name: astrocyte (CL0000127)
    Fold Change: -1.9406
    Cell Significance Index: -22.2100
  • Cell Name: lens fiber cell (CL0011004)
    Fold Change: -2.0254
    Cell Significance Index: -64.0600
  • Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
    Fold Change: -2.0270
    Cell Significance Index: -49.1000
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: -2.0521
    Cell Significance Index: -40.3900
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -2.0803
    Cell Significance Index: -73.1000
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -2.1646
    Cell Significance Index: -55.6400
  • Cell Name: caudal ganglionic eminence derived cortical interneuron (CL4023064)
    Fold Change: -2.1887
    Cell Significance Index: -43.6500
  • Cell Name: kidney epithelial cell (CL0002518)
    Fold Change: -2.2153
    Cell Significance Index: -65.2500
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -2.2410
    Cell Significance Index: -64.2400
  • Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
    Fold Change: -2.3961
    Cell Significance Index: -31.9400
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: -2.5351
    Cell Significance Index: -73.0400
  • Cell Name: keratinocyte (CL0000312)
    Fold Change: -2.5480
    Cell Significance Index: -63.6400
  • Cell Name: cerebral cortex endothelial cell (CL1001602)
    Fold Change: -2.5683
    Cell Significance Index: -52.2600
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: -2.6073
    Cell Significance Index: -69.6200
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -2.6511
    Cell Significance Index: -70.9200
  • Cell Name: intratelencephalic-projecting glutamatergic cortical neuron (CL4023008)
    Fold Change: -2.6622
    Cell Significance Index: -27.3700
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: -2.7490
    Cell Significance Index: -58.7600
  • Cell Name: erythrocyte (CL0000232)
    Fold Change: -2.7640
    Cell Significance Index: -70.4200
  • Cell Name: peg cell (CL4033014)
    Fold Change: -2.7799
    Cell Significance Index: -64.2300
  • Cell Name: preadipocyte (CL0002334)
    Fold Change: -2.9067
    Cell Significance Index: -56.7300
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: -3.0175
    Cell Significance Index: -35.9700
  • Cell Name: type I muscle cell (CL0002211)
    Fold Change: -3.0501
    Cell Significance Index: -74.4200
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -3.0629
    Cell Significance Index: -83.3700

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** ASTN1 is a gene that belongs to the clathrin-coated vesicle pathway, which plays a crucial role in the regulation of endocytosis and exocytosis in cells. The gene is significantly expressed in various neuronal cell types, including Purkinje cells, inhibitory interneurons, and astrocytes of the cerebral cortex. Notably, ASTN1 is also expressed in non-neuronal cells, such as stellate neurons and lamp5 GABAergic cortical interneurons. **Pathways and Functions:** ASTN1 is involved in several cellular pathways, including: 1. **Neuron migration:** ASTN1 plays a crucial role in regulating the migration of neurons during development. Studies have shown that ASTN1 is required for the proper formation of the cerebral cortex and the establishment of neuronal connections. 2. **Clathrin-coated vesicle pathway:** ASTN1 is a component of the clathrin-coated vesicle pathway, which is involved in the regulation of endocytosis and exocytosis. This pathway is essential for maintaining cellular homeostasis and regulating the trafficking of proteins and lipids within cells. 3. **Cell-cell adhesion:** ASTN1 is also involved in the regulation of cell-cell adhesion, particularly in the context of neuronal development. Studies have shown that ASTN1 is required for the proper formation of neuronal cell-cell adhesions, which are essential for the establishment of neuronal connections. **Clinical Significance:** The discovery of ASTN1 has significant implications for our understanding of neurological disorders, particularly those related to neuronal development and function. Mutations in the ASTN1 gene have been implicated in several neurological disorders, including: 1. **Cerebral cortex disorders:** ASTN1 mutations have been associated with disorders of the cerebral cortex, including cerebral cortex hypoplasia and cortical dysplasia. 2. **Neurodevelopmental disorders:** ASTN1 mutations have also been implicated in neurodevelopmental disorders, such as autism spectrum disorder and schizophrenia. 3. **Neurodegenerative disorders:** ASTN1 mutations have been associated with neurodegenerative disorders, such as Alzheimer's disease and Parkinson's disease. In conclusion, ASTN1 is a novel gene that plays a crucial role in regulating neuronal migration, cell-cell adhesion, and the clathrin-coated vesicle pathway. Further studies are needed to fully elucidate the functions of ASTN1 and its role in neurological disorders. As an expert immunologist, I believe that the discovery of ASTN1 has significant implications for our understanding of the complex relationships between genes, proteins, and diseases.

Genular Protein ID: 2212114365

Symbol: ASTN1_HUMAN

Name: Astrotactin-1

UniProtKB Accession Codes:

O14525 A5PL12 B4DHI9 E9PFR8 O60799 Q5W0V7 Q5W0V8

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 8 Ensembl 2 ExpressionAtlas 1 GO 8 Gene3D 1 GeneCards 1 GeneTree 1 GenomeRNAi 1 GlyCosmos 1 GlyGen 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 7 KEGG 1 MANE-Select 1 MIM 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PIR 1 PRO 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 3 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 3 RNAct 1 RefSeq 2 SIGNOR 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TCDB 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 neXtProt 1

Citations:

PubMed ID: 9179496

Title: Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins.

PubMed ID: 9179496

DOI: 10.1093/dnares/4.1.53

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 1302
  • Mass: 144913
  • Checksum: CA9EDDA6621C4F3B
  • Sequence:
    • MALAGLCALL ACCWGPAAVL ATAAGDVDPS KELECKLKSI TVSALPFLRE NDLSIMHSPS 
ASEPKLLFSV RNDFPGEMVV VDDLENTELP YFVLEISGNT EDIPLVRWRQ QWLENGTLLF 
HIHHQDGAPS LPGQDPTEEP QHESAEEELR ILHISVMGGM IALLLSILCL VMILYTRRRW 
CKRRRVPQPQ KSASAEAANE IHYIPSVLIG GHGRESLRNA RVQGHNSSGT LSIRETPILD 
GYEYDITDLR HHLQRECMNG GEDFASQVTR TLDSLQGCNE KSGMDLTPGS DNAKLSLMNK 
YKDNIIATSP VDSNHQQATL LSHTSSSQRK RINNKARAGS AFLNPEGDSG TEAENDPQLT 
FYTDPSRSRR RSRVGSPRSP VNKTTLTLIS ITSCVIGLVC SSHVNCPLVV KITLHVPEHL 
IADGSRFILL EGSQLDASDW LNPAQVVLFS QQNSSGPWAM DLCARRLLDP CEHQCDPETG 
RREHRAAGEC LCYEGYMKDP VHKHLCIRNE WGTNQGPWPY TIFQRGFDLV LGEQPSDKIF 
RFTYTLGEGM WLPLSKSFVI PPAELAINPS AKCKTDMTVM EDAVEVREEL MTSSSFDSLE 
VLLDSFGPVR DCSKDNGGCS KNFRCISDRK LDSTGCVCPS GLSPMKDSSG CYDRHIGVDC 
SDGFNGGCEQ LCLQQMAPFP DDPTLYNILM FCGCIEDYKL GVDGRSCQLI TETCPEGSDC 
GESRELPMNQ TLFGEMFFGY NNHSKEVAAG QVLKGTFRQN NFARGLDQQL PDGLVVATVP 
LENQCLEEIS EPTPDPDFLT GMVNFSEVSG YPVLQHWKVR SVMYHIKLNQ VAISQALSNA 
LHSLDGATSR ADFVALLDQF GNHYIQEAIY GFEESCSIWY PNKQVQRRLW LEYEDISKGN 
SPSDESEERE RDPKVLTFPE YITSLSDSGT KHMAAGVRME CHSKGRCPSS CPLCHVTSSP 
DTPAEPVLLE VTKAAPIYEL VTNNQTQRLL QEATMSSLWC SGTGDVIEDW CRCDSTAFGA 
DGLPTCAPLP QPVLRLSTVH EPSSTLVVLE WEHSEPPIGV QIVDYLLRQE KVTDRMDHSK 
VETETVLSFV DDIISGAKSP CAMPSQVPDK QLTTISLIIR CLEPDTIYMF TLWGVDNTGR 
RSRPSDVIVK TPCPVVDDVK AQEIADKIYN LFNGYTSGKE QQTAYNTLLD LGSPTLHRVL 
YHYNQHYESF GEFTWRCEDE LGPRKAGLIL SQLGDLSSWC NGLLQEPKIS LRRSSLKYLG 
CRYSEIKPYG LDWAELSRDL RKTCEEQTLS IPYNDYGDSK EI

Genular Protein ID: 2055583789

Symbol: A6H8Y4_HUMAN

Name: N/A

UniProtKB Accession Codes:

A6H8Y4

Database IDs:

BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 4 GO 4 Gene3D 1 InterPro 7 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 1 Pfam 3 RefSeq 1 SAM 3 SMART 4 SUPFAM 1

Citations:

PubMed ID: 11181995

Title: The sequence of the human genome.

PubMed ID: 11181995

DOI: 10.1126/science.1058040

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 1294
  • Mass: 143989
  • Checksum: ECA7B4015812339F
  • Sequence:
    • MALAGLCALL ACCWGPAAVL ATAAGDVDPS KELECKLKSI TVSALPFLRE NDLSIMHSPS 
ASEPKLLFSV RNDFPGEMVV VDDLENTELP YFVLEISGNT EDIPLVRWRQ QWLENGTLLF 
HIHHQDGAPS LPGQDPTEEP QHESAEEELR ILHISVMGGM IALLLSILCL VMILYTRRRW 
CKRRRVPQPQ KSASAEAANE IHYIPSVLIG GHGRESLRNA RVQGHNSSGT LSIRETPILD 
GYEYDITDLR HHLQRECMNG GEDFASQVTR TLDSLQGCNE KSGMDLTPGS DNAKLSLMNK 
YKDNIIATSP VDSNHQQATL LSHTSSSQRK RINNKARAGS AFLNPEGDSG TEAENDPQLT 
FYTDPSRSRR RSRVGSPRSP VNKTTLTLIS ITSCVIGLVC SSHVNCPLVV KITLHVPEHL 
IADGSRFILL EGSQLDASDW LNPAQVVLFS QQNSSGPWAM DLCARRLLDP CEHQCDPETG 
ECLCYEGYMK DPVHKHLCIR NEWGTNQGPW PYTIFQRGFD LVLGEQPSDK IFRFTYTLGE 
GMWLPLSKSF VIPPAELAIN PSAKCKTDMT VMEDAVEVRE ELMTSSSFDS LEVLLDSFGP 
VRDCSKDNGG CSKNFRCISD RKLDSTGCVC PSGLSPMKDS SGCYDRHIGV DCSDGFNGGC 
EQLCLQQMAP FPDDPTLYNI LMFCGCIEDY KLGVDGRSCQ LITETCPEGS DCGESRELPM 
NQTLFGEMFF GYNNHSKEVA AGQVLKGTFR QNNFARGLDQ QLPDGLVVAT VPLENQCLEE 
ISEPTPDPDF LTGMVNFSEV SGYPVLQHWK VRSVMYHIKL NQVAISQALS NALHSLDGAT 
SRADFVALLD QFGNHYIQEA IYGFEESCSI WYPNKQVQRR LWLEYEDISK GNSPSDESEE 
RERDPKVLTF PEYITSLSDS GTKRMAAGVR MECQSKGRCP SSCPLCHVTS SPDTPAEPVL 
LEVTKAAPIY ELVTNNQTQR LLQEATMSSL WCSGTGDVIE DWCRCDSTAF GADGLPTCAP 
LPQPVLRLST VHEPSSTLVV LEWEHSEPPI GVQIVDYLLR QEKVTDRMDH SKVETETVLS 
FVDDIISGAK SPCAMPSQVP DKQLTTISLI IRCLEPDTIY MFTLWGVDNT GRRSRPSDVI 
VKTPCPVVDD VKAQEIADKI YNLFNGYTSG KEQQTAYNTL LDLGSPTLHR VLYHYNQHYE 
SFGEFTWRCE DELGPRKAGL ILSQLGDLSS WCNGLLQEPK ISLRRSSLKY LGCRYSEIKP 
YGLDWAELSR DLRKTCEEQT LSIPYNDYGD SKEI

Genular Protein ID: 1334921300

Symbol: B1AJS1_HUMAN

Name: N/A

UniProtKB Accession Codes:

B1AJS1

Database IDs:

AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 DisGeNET 1 EMBL 6 Ensembl 2 ExpressionAtlas 1 GO 2 Gene3D 1 GeneTree 1 HGNC 1 InterPro 7 MassIVE 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 2 Pfam 3 Proteomes 2 ProteomicsDB 2 RefSeq 1 SAM 3 SMART 4 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 11237011

Title: Initial sequencing and analysis of the human genome.

PubMed ID: 11237011

DOI: 10.1038/35057062

PubMed ID: 15496913

Title: Finishing the euchromatic sequence of the human genome.

PubMed ID: 15496913

DOI: 10.1038/nature03001

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

Sequence Information:

  • Length: 1228
  • Mass: 136486
  • Checksum: AC672AE9B387D2D0
  • Sequence:
    • MALAGLCALL ACCWGPAAVL ATAAGDVDPS KELECKLKSI TVSALPFLRE NDLSIMHSPS 
ASEPKLLFSV RNDFPGEMVV VDDLENTELP YFVLEISGNT EDIPLVRWRQ QWLENGTLLF 
HIHHQDGAPS LPGQDPTEEP QHESAEEELR ILHISVMGGM IALLLSILCL VMILYTRRRW 
CKRRRVPQPQ KSASAEAANE IHYIPSVLIG GHGRESLRNA RVQGHNSSGT LSIRETPILD 
GYEYDITDLR HHLQRECMNG GEDFASQVTR TLDSLQGCNE KSGMDLTPGS DNAKLSLMNK 
YKDNIIATSP VDSNHQQATL LSHTSSSQRK RINNKARAGS AFLNPEGDSG TEAENDPQLT 
FYTDPSRSRR RSRVGSPRSP VNKTTLTLIS ITSCVIGLVC SSHVNCPLVV KITLHVPEHL 
IADGSRFILL EGSQLDASDW LNPAQVVLFS QQNSSGPWAM DLCARRLLDP CEHQCDPETG 
ECLCYEGYMK DPVHKHLCIR NEWGTNQGPW PYTIFQRGFD LVLGEQPSDK IFRFTYTLGE 
GMWLPLSKSF VIPPAELAIN PSAKCKTDMT VMEDAVEVRE ELMTSSSFDS LEVLLDSFGP 
VRDCSKDNGG CSKNFRCISD RKLDSTGCVC PSGLSPMKDS SGCYDRHIGV DCSDGFNGGC 
EQLCLQQMAP FPDDPTLYNI LMFCGCIEDY KLGVDGRSCQ LITETCPEGS DCGESRELPM 
NQTLFGEMFF GYNNHSKEVA AGQVLKGTFR QNNFARGLDQ QLPDGLVVAT VPLENQCLEE 
ISEPTPDPDF LTGMVNFSEV SGYPVLQHWK VRSVMYHIKL NQVAISQALS NALHSLDGAT 
SRADFVALLD QFGNHYIQEA IYGFEESCSI WYPNKQVQRR LWLEYEDISK GNSPSDESEE 
RERDPKVLTF PEYITSLSDS GTKHMAAGVR MECHSKGRCP SSCPLCHVTS SPDTPAEPVL 
LEVTKAAPIY ELVTNNQTQR LLQEATMSSL WCSGTGDVIE DWCRCDSTAF GADGLPTCAP 
LPQPVLRLST VHEPSSTLVV LEWEHSEPPI GVQIVDYLLR QEKVTDRMDH SKVETETVLS 
FVDDIISGAK SPCAMPSQVP DKQLTTISLI IRCLEPDTIY MFTLWGVDNT GRRSRPSDVI 
VKTPCPVVDD VKAQEIADKI YNLFNGYTSG KEQQTAYNTL LDLGSPTLHR VLYHYNQHYE 
SFGEFTWRCE DELGPRLPAC WDSQRSCR

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.