Details for: Abd B

Gene ID: 47763

Symbol: Abd B

Ensembl ID: FBgn0000015

Description: Abdominal B

Associated with

  • Determination of genital disc primordium
    (GO:0035225)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • External genitalia morphogenesis
    (GO:0035261)
  • Female genitalia development
    (GO:0030540)
  • Genital disc anterior/posterior pattern formation
    (GO:0035224)
  • Genital disc sexually dimorphic development
    (GO:0035263)
  • Germ cell migration
    (GO:0008354)
  • Gonadal mesoderm development
    (GO:0007506)
  • Imaginal disc-derived female genitalia development
    (GO:0007486)
  • Male genitalia development
    (GO:0030539)
  • Male gonad development
    (GO:0008584)
  • Male pigmentation
    (GO:0048094)
  • Midgut development
    (GO:0007494)
  • Negative regulation of cardioblast cell fate specification
    (GO:0009997)
  • Negative regulation of female receptivity
    (GO:0007621)
  • Negative regulation of salivary gland boundary specification
    (GO:0045705)
  • Negative regulation of striated muscle tissue development
    (GO:0045843)
  • Neuroendocrine cell differentiation
    (GO:0061101)
  • Nucleus
    (GO:0005634)
  • Open tracheal system development
    (GO:0007424)
  • Pole cell migration
    (GO:0007280)
  • Polytene chromosome band
    (GO:0005704)
  • Positive regulation of apoptotic process involved in morphogenesis
    (GO:1902339)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Segment specification
    (GO:0007379)
  • Specification of segmental identity, abdomen
    (GO:0007385)
  • Sperm storage
    (GO:0046693)
  • Spiracle morphogenesis, open tracheal system
    (GO:0035277)
  • Transcription cis-regulatory region binding
    (GO:0000976)

Other Information

Genular Protein ID: 709548508

Symbol: ABDB_DROME

Name: Homeobox protein abdominal-B

UniProtKB Accession Codes:

P09087 Q9VEQ8 Q9VEQ9

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CDD 1 CTD 1 DIP 1 DNASU 1 EMBL 8 EnsemblMetazoa 8 ExpressionAtlas 1 FlyBase 1 GO 32 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PDB 5 PDBsum 4 PIR 3 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 8 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 7667301

Title: Complete sequence of the bithorax complex of Drosophila.

PubMed ID: 7667301

DOI: 10.1073/pnas.92.18.8398

PubMed ID: 2903049

Title: Evidence that the Abdominal-B r element function is conferred by a trans-regulatory homeoprotein.

PubMed ID: 2903049

DOI: 10.1002/j.1460-2075.1988.tb03189.x

PubMed ID: 2575066

Title: The molecular genetics of the bithorax complex of Drosophila: characterization of the products of the Abdominal-B domain.

PubMed ID: 2575066

DOI: 10.1101/gad.3.9.1424

PubMed ID: 2482824

Title: The morphogenetic and regulatory functions of the Drosophila Abdominal-B gene are encoded in overlapping RNAs transcribed from separate promoters.

PubMed ID: 2482824

DOI: 10.1101/gad.3.12a.1969

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 2416463

Title: Homeo box genes of the Antennapedia and bithorax complexes of Drosophila.

PubMed ID: 2416463

DOI: 10.1016/0092-8674(85)90013-3

PubMed ID: 2903050

Title: Different transcripts of the Drosophila Abd-B gene correlate with distinct genetic sub-functions.

PubMed ID: 2903050

DOI: 10.1002/j.1460-2075.1988.tb03190.x

Sequence Information:

  • Length: 493
  • Mass: 55096
  • Checksum: 55A11B5E97983A5F
  • Sequence:
    • MQQHHLQQQQ QQQQQQEQQH LQEQQQHLQQ LHHHAHHHLP QPLHTTSHHH SAHPHLQQQQ 
QQQQHAVVAS SPSSVLQQQQ QQSTPTTHST PTHAVMYEDP PPVPLVAVQQ QHLPAPQQQQ 
QLQQQQQQQQ QQLATTPVAG ALSPAQTPTG PSAQQQQHLT SPHHQQLPQQ QTPNSVASGA 
SSNLQQQQQQ QNAAVAPGQT QIVAPTTASV SPSSVSSQKE DINMSIQLAP LHIPAIRAGP 
GFETDTSAAV KRHTAHWAYN DEGFNQHYGS GYYDRKHMFA YPYPETQFPV GQYWGPNYRP 
DQTTSAAAAA AYMNEAERHV SAAARQSVEG TSTSSYEPPT YSSPGGLRGY PSENYSSSGA 
SGGLSVGAVG PCTPNPGLHE WTGQVSVRKK RKPYSKFQTL ELEKEFLFNA YVSKQKRWEL 
ARNLQLTERQ VKIWFQNRRM KNKKNSQRQA NQQNNNNNSS SNHNHAQATQ QHHSGHHLNL 
SLNMGHHAAK MHQ

Genular Protein ID: 256551625

Symbol: A0A0B4KGT1_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4KGT1

Database IDs:

AGR 1 ARBA 5 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 GenomeRNAi 1 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 323
  • Mass: 35945
  • Checksum: 8AA19E4C71AABFF6
  • Sequence:
    • MSIQLAPLHI PAIRAGPGFE TDTSAAVKRH TAHWAYNDEG FNQHYGSGYY DRKHMFAYPY 
PETQFPVGQY WGPNYRPDQT TSAAAAAAYM NEAERHVSAA ARQSVEGTST SSYEPPTYSS 
PGGLRGYPSE NYSSSGASGG LSVGAVGPCT PNPGLHEWTG QVSVRKKRKP YSKFQTLELE 
KEFLFNAYVS KQKRWELARN LQLTERQVKI WFQNRRMKNK KNSQRQANQQ NNNNNSSSNH 
NHAQATQQHH SGHHLNLSLN MGHHAAKMHQ XPLDNSSAGA MGFATYXQLA NPSSGNPSSN 
PNPMSDPNHH HLIKNELAMD FPC

Genular Protein ID: 468455116

Symbol: A0A126GUV9_DROME

Name: N/A

UniProtKB Accession Codes:

A0A126GUV9

Database IDs:

AGR 1 ARBA 5 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 GenomeRNAi 1 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 286
  • Mass: 31939
  • Checksum: 1F0CA8D82C49AE3B
  • Sequence:
    • MSIQLAPLHI PAIRAGPGFE TDTSAAVKRH TAHWAYNDEG FNQHYGSGYY DRKHMFAYPY 
PETQFPVGQY WGPNYRPDQT TSAAAAAAYM NEAERHVSAA ARQSVEGTST SSYEPPTYSS 
PGGLRGYPSE NYSSSGASGG LSVGAVGPCT PNPGLHEWTG QVSVRKKRKP YSKFQTLELE 
KEFLFNAYVS KQKRWELARN LQLTERQVKI WFQNRRMKNK KNSQRQANQQ NNNNNSSSNH 
NHAQATQQHH SGHHLNLSLN MGHHAAKMHQ XPLDNSSAGA MGFATY

Genular Protein ID: 2778233825

Symbol: A4V304_DROME

Name: N/A

UniProtKB Accession Codes:

A4V304

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 12 EnsemblMetazoa 6 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GenomeRNAi 1 HOGENOM 1 InterPro 5 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 6 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 270
  • Mass: 30344
  • Checksum: 3C951B3B406F1E49
  • Sequence:
    • MSIQLAPLHI PAIRAGPGFE TDTSAAVKRH TAHWAYNDEG FNQHYGSGYY DRKHMFAYPY 
PETQFPVGQY WGPNYRPDQT TSAAAAAAYM NEAERHVSAA ARQSVEGTST SSYEPPTYSS 
PGGLRGYPSE NYSSSGASGG LSVGAVGPCT PNPGLHEWTG QVSVRKKRKP YSKFQTLELE 
KEFLFNAYVS KQKRWELARN LQLTERQVKI WFQNRRMKNK KNSQRQANQQ NNNNNSSSNH 
NHAQATQQHH SGHHLNLSLN MGHHAAKMHQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.