Details for: alpha Catr

Gene ID: 49713

Symbol: alpha Catr

Ensembl ID: FBgn0029105

Description: alpha-catenin related

Associated with

Other Information

Genular Protein ID: 1518310170

Symbol: A0A0C4DHD7_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0C4DHD7

Database IDs:

AGR 1 ARBA 2 Bgee 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 4 Gene3D 1 InParanoid 1 InterPro 3 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 2 RefSeq 1 STRING 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 810
  • Mass: 91469
  • Checksum: B5F286C9717E5C6E
  • Sequence:
    • MYGITQSTVN NQRFRVRDMD NEQIMSTFGN IGHLLNIAVE RFITIGEIIA EENIDIKGDM 
YEAAKEARDA GKSIERLCDI SPLSGMELRH HIEPLKDYGA IILAARSLLS SVTRILLLVD 
IIVVKKLLTA KKRASESLEK LESVMNFTEF VRAFSVFGTE MIELAYLTGH HRNSFKEERR 
RAQMFSARQI LEKSIAILLT SSKNSLIHSD CVIVKENRDT VFCQIRRAMD LIHFVVKDSI 
FDTAKHMPFE KQASNPNYEN ESIYTTIKRI VNLIKRYKYQ MSYYEGSGEG NNNSDAYFSF 
LDDDLWKSEK NLPSAAGGGR MVNNTNFRKH LSSESLDLRE ELSLAFEKLF EKAHDFTDSP 
YISHNHRKNI LSYCDNCKLE FDLYLNTIMK DQHEGGGGAG GVGGVGGGQV KGRSDPELGM 
LSSLEELCKQ LVVSVSSQIE DFNESLKICS KLVKSFHVLA TNYDIDNLNQ RSSKFHDCCD 
HIFDICKLLQ HIAPTERLQV QAKCLAINLR IYGPQVFIAA KILWKYSNSS AANENFESFS 
DMWKWLTNEI SMIAKKILVS INTTKGDRDA DAEKCESSSD KLTKSGVPAT EDGEMVEYSG 
LEGKNNGDLN TYQSKWSEDL SDDNDILKRA KNMSAMAFLM YQFTKGNGSL RTTQDLFTQA 
EYFAEEANRL YKVLRHFSYQ VPASDNKKDL LNILDRVPTF VQALQFTVKD HTVGKAATFV 
KVDHVIRETK NLMNVINKVV SKCFECATKY KLNLTGITGG LTSERSNENM AGGMCDSKGT 
TSSSDIPXHY GMARRAKGDA RRTRVSFLLF

Genular Protein ID: 1828420887

Symbol: Q9W1F1_DROME

Name: N/A

UniProtKB Accession Codes:

Q9W1F1

Database IDs:

AGR 1 ARBA 2 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 4 Gene3D 1 GeneTree 1 HOGENOM 1 IntAct 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 Pfam 1 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 787
  • Mass: 88767
  • Checksum: B6BDDD4E837EB36B
  • Sequence:
    • MYGITQSTVN NQRFRVRDMD NEQIMSTFGN IGHLLNIAVE RFITIGEIIA EENIDIKGDM 
YEAAKEARDA GKSIERLCDI SPLSGMELRH HIEPLKDYGA IILAARSLLS SVTRILLLVD 
IIVVKKLLTA KKRASESLEK LESVMNFTEF VRAFSVFGTE MIELAYLTGH HRNSFKEERR 
RAQMFSARQI LEKSIAILLT SSKNSLIHSD CVIVKENRDT VFCQIRRAMD LIHFVVKDSI 
FDTAKHMPFE KQASNPNYEN ESIYTTIKRI VNLIKRYKYQ MSYYEGSGEG NNNSDAYFSF 
LDDDLWKSEK NLPSAAGGGR MVNNTNFRKH LSSESLDLRE ELSLAFEKLF EKAHDFTDSP 
YISHNHRKNI LSYCDNCKLE FDLYLNTIMK DQHEGGGGAG GVGGVGGGQV KGRSDPELGM 
LSSLEELCKQ LVVSVSSQIE DFNESLKICS KLVKSFHVLA TNYDIDNLNQ RSSKFHDCCD 
HIFDICKLLQ HIAPTERLQV QAKCLAINLR IYGPQVFIAA KILWKYSNSS AANENFESFS 
DMWKWLTNEI SMIAKKILVS INTTKGDRDA DAEKCESSSD KLTKSGVPAT EDGEMVEYSG 
LEGKNNGDLN TYQSKWSEDL SDDNDILKRA KNMSAMAFLM YQFTKGNGSL RTTQDLFTQA 
EYFAEEANRL YKVLRHFSYQ VPASDNKKDL LNILDRVPTF VQALQFTVKD HTVGKAATFV 
KVDHVIRETK NLMNVINKVV SKCFECATKY KLNLTGITGG LTSERSNENM AGGMCDSKGT 
TSSSDIP

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.