Details for: ATP6V0A1

Gene ID: 535

Symbol: ATP6V0A1

Ensembl ID: ENSG00000033627

Description: ATPase H+ transporting V0 subunit a1

Associated with

Cells (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: 2.58
    Marker Score: 11958
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 2.31
    Marker Score: 45858
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 2.28
    Marker Score: 9535
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: 2.23
    Marker Score: 17116
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 2.21
    Marker Score: 33076
  • Cell Name: OFF retinal ganglion cell (CL4023033)
    Fold Change: 2.2
    Marker Score: 923
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 2.2
    Marker Score: 83432
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 2.08
    Marker Score: 4219
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 2.07
    Marker Score: 7996
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 2.04
    Marker Score: 8450
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 2.02
    Marker Score: 74360
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 2.01
    Marker Score: 20718
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 1.99
    Marker Score: 18704
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.97
    Marker Score: 121445
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 1.97
    Marker Score: 586
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: 1.86
    Marker Score: 17673
  • Cell Name: neuron (CL0000540)
    Fold Change: 1.83
    Marker Score: 7466
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: 1.81
    Marker Score: 15554
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: 1.79
    Marker Score: 564
  • Cell Name: pyramidal neuron (CL0000598)
    Fold Change: 1.78
    Marker Score: 2990
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 1.77
    Marker Score: 37684
  • Cell Name: glandular epithelial cell (CL0000150)
    Fold Change: 1.76
    Marker Score: 4331
  • Cell Name: corneal epithelial cell (CL0000575)
    Fold Change: 1.74
    Marker Score: 1926
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: 1.69
    Marker Score: 2047
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 1.66
    Marker Score: 973
  • Cell Name: ON retinal ganglion cell (CL4023032)
    Fold Change: 1.65
    Marker Score: 451
  • Cell Name: cerebral cortex neuron (CL0010012)
    Fold Change: 1.62
    Marker Score: 4623
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 1.6
    Marker Score: 3515.5
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: 1.58
    Marker Score: 2440
  • Cell Name: glycinergic amacrine cell (CL4030028)
    Fold Change: 1.55
    Marker Score: 1464
  • Cell Name: A2 amacrine cell (CL0004219)
    Fold Change: 1.54
    Marker Score: 490
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 1.51
    Marker Score: 51166
  • Cell Name: type A enteroendocrine cell (CL0002067)
    Fold Change: 1.51
    Marker Score: 609
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: 1.47
    Marker Score: 3692
  • Cell Name: myoepithelial cell of mammary gland (CL0002324)
    Fold Change: 1.45
    Marker Score: 7118
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: 1.43
    Marker Score: 48515
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 1.4
    Marker Score: 5845
  • Cell Name: PP cell (CL0000696)
    Fold Change: 1.4
    Marker Score: 315
  • Cell Name: skeletal muscle satellite stem cell (CL0008011)
    Fold Change: 1.39
    Marker Score: 1480
  • Cell Name: rod bipolar cell (CL0000751)
    Fold Change: 1.35
    Marker Score: 707
  • Cell Name: endocrine cell (CL0000163)
    Fold Change: 1.33
    Marker Score: 686
  • Cell Name: peripheral nervous system neuron (CL2000032)
    Fold Change: 1.32
    Marker Score: 1485
  • Cell Name: vascular leptomeningeal cell (CL4023051)
    Fold Change: 1.31
    Marker Score: 1506
  • Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
    Fold Change: 1.3
    Marker Score: 438
  • Cell Name: epithelial cell of proximal tubule (CL0002306)
    Fold Change: 1.3
    Marker Score: 4622
  • Cell Name: immature innate lymphoid cell (CL0001082)
    Fold Change: 1.3
    Marker Score: 2643
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: 1.28
    Marker Score: 1349
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 1.26
    Marker Score: 369
  • Cell Name: lens fiber cell (CL0011004)
    Fold Change: 1.25
    Marker Score: 396
  • Cell Name: myeloid leukocyte (CL0000766)
    Fold Change: 1.25
    Marker Score: 1510
  • Cell Name: oligodendrocyte (CL0000128)
    Fold Change: 1.24
    Marker Score: 2961
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: 1.23
    Marker Score: 717
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: 1.21
    Marker Score: 3457
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 1.19
    Marker Score: 2812
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 1.18
    Marker Score: 585
  • Cell Name: regular atrial cardiac myocyte (CL0002129)
    Fold Change: 1.18
    Marker Score: 4189
  • Cell Name: fibroblast of breast (CL4006000)
    Fold Change: 1.17
    Marker Score: 670
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.17
    Marker Score: 449
  • Cell Name: chromaffin cell (CL0000166)
    Fold Change: 1.17
    Marker Score: 1643
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 1.16
    Marker Score: 18704
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 1.16
    Marker Score: 2225
  • Cell Name: Hofbauer cell (CL3000001)
    Fold Change: 1.15
    Marker Score: 636
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 1.14
    Marker Score: 1231
  • Cell Name: renal interstitial pericyte (CL1001318)
    Fold Change: 1.14
    Marker Score: 1087
  • Cell Name: luminal cell of prostate epithelium (CL0002340)
    Fold Change: 1.13
    Marker Score: 659
  • Cell Name: P/D1 enteroendocrine cell (CL0002268)
    Fold Change: 1.12
    Marker Score: 417
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 1.11
    Marker Score: 963
  • Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
    Fold Change: 1.11
    Marker Score: 5815
  • Cell Name: Kupffer cell (CL0000091)
    Fold Change: 1.1
    Marker Score: 1099
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 1.09
    Marker Score: 1471
  • Cell Name: stellate neuron (CL0000122)
    Fold Change: 1.09
    Marker Score: 5853
  • Cell Name: mature microglial cell (CL0002629)
    Fold Change: 1.07
    Marker Score: 385
  • Cell Name: cerebellar granule cell precursor (CL0002362)
    Fold Change: 1.05
    Marker Score: 588
  • Cell Name: mononuclear cell (CL0000842)
    Fold Change: 1.05
    Marker Score: 337
  • Cell Name: microglial cell (CL0000129)
    Fold Change: 1.03
    Marker Score: 1880
  • Cell Name: central nervous system macrophage (CL0000878)
    Fold Change: 1.03
    Marker Score: 512
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: 1.02
    Marker Score: 8954
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 1.02
    Marker Score: 1234
  • Cell Name: type II pneumocyte (CL0002063)
    Fold Change: 1
    Marker Score: 6535
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71683
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: 1
    Marker Score: 247
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 47908
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30393
  • Cell Name: mature astrocyte (CL0002627)
    Fold Change: 0.97
    Marker Score: 640
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: 0.97
    Marker Score: 1199
  • Cell Name: brainstem motor neuron (CL2000047)
    Fold Change: 0.97
    Marker Score: 563
  • Cell Name: sympathetic neuron (CL0011103)
    Fold Change: 0.97
    Marker Score: 320
  • Cell Name: midzonal region hepatocyte (CL0019028)
    Fold Change: 0.97
    Marker Score: 4175
  • Cell Name: cortical thymic epithelial cell (CL0002364)
    Fold Change: 0.96
    Marker Score: 3563
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 0.95
    Marker Score: 3124
  • Cell Name: granule cell (CL0000120)
    Fold Change: 0.95
    Marker Score: 7188
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.94
    Marker Score: 487
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.94
    Marker Score: 2400
  • Cell Name: enterocyte (CL0000584)
    Fold Change: 0.94
    Marker Score: 4532
  • Cell Name: lung macrophage (CL1001603)
    Fold Change: 0.94
    Marker Score: 1077
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.94
    Marker Score: 443
  • Cell Name: photoreceptor cell (CL0000210)
    Fold Change: 0.93
    Marker Score: 703
  • Cell Name: cholangiocyte (CL1000488)
    Fold Change: 0.93
    Marker Score: 348
  • Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
    Fold Change: 0.93
    Marker Score: 51957
  • Cell Name: centrilobular region hepatocyte (CL0019029)
    Fold Change: 0.92
    Marker Score: 5942

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Other Information

**Key characteristics:** - The gene is located on chromosome 19q13.3. - It is a large gene with a size of approximately 1.1 MB. - It contains 13 exons and 12 introns. - The protein encoded by the gene is a transmembrane protein with a molecular weight of approximately 160 kDa. **Pathways and functions:** - The ATP6V0A1 gene is involved in several important pathways, including: - Atpase binding: The protein is a key regulator of ATP-dependent protein kinases (ADPKs), which are involved in various cellular processes. - Immune system: The protein is expressed in inhibitory neurons of the central nervous system (CNS) and is involved in the regulation of inflammation and immune responses. - Innate immune system: The protein is also expressed in myeloid cells and is involved in the regulation of inflammation and tissue repair. - Insulin receptor recycling: The protein is a key regulator of insulin receptor recycling, which is essential for maintaining blood sugar homeostasis. - Ion channel transport: The protein is expressed in cells that are involved in ion channel transport, such as neurons and muscle cells. - Iron uptake and transport: The protein is involved in the transport of iron ions into cells. - Lysosomal lumen acidification: The protein is involved in the acidification of lysosomal lumens, which is essential for the maturation of lysosomal enzymes. - Neutrophil degranulation: The protein is expressed in neutrophils and is involved in the degranulation of immune cells. - Protein binding: The protein is involved in protein binding, such as the binding of insulin receptors to their ligands. - Proton-transporting atpase activity: The protein is a key regulator of proton-transporting atpase activity, which is essential for the maintenance of cellular pH. - Rotational mechanism: The protein undergoes a rotational mechanism of activation, which is important for its function. - Regulation of macroautophagy: The protein is involved in the regulation of macroautophagy, a process that is responsible for the turnover of cellular components. - Ros and rns production in phagocytes: The protein is involved in the production of ROS and rNS in phagocytes, which are immune cells that are responsible for the phagocytosis of foreign particles. - Signaling by insulin receptor: The protein is a key regulator of insulin receptor signaling, which is essential for the regulation of blood sugar levels. - Signaling by receptor tyrosine kinases: The protein is also a key regulator of receptor tyrosine kinase signaling, which is essential for the regulation of cell growth and differentiation. - Signal transduction: The protein is involved in signal transduction pathways that are involved in various cellular processes, including inflammation and cell growth. - Transferrin endocytosis and recycling: The protein is involved in the transferrin endocytosis and recycling pathway, which is essential for the recycling of transferrin, a protein that is involved in the transport of iron ions. - Transport of small molecules: The protein is involved in the transport of small molecules, such as ions and molecules that are involved in cellular metabolism. - Vacuolar acidification: The protein is involved in the vacuolar acidification process, which is essential for the maintenance of cellular pH. **Clinical significance:** - Mutations in the ATP6V0A1 gene have been linked to several human diseases, including amyotrophic lateral sclerosis (ALS), Alzheimer's disease, and diabetes. - The protein is a potential target for therapeutic interventions in these diseases.

Genular Protein ID: 1361359308

Symbol: VPP1_HUMAN

Name: V-type proton ATPase 116 kDa subunit a 1

UniProtKB Accession Codes:

Q93050 B7Z3B7 Q8N5G7 Q9NSX0

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioCyc 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 3 CTD 1 ChiTaRS 1 ComplexPortal 1 DMDM 1 DNASU 1 DisGeNET 1 DrugBank 1 EMBL 8 EMDB 5 EPD 1 Ensembl 4 ExpressionAtlas 1 GO 27 GeneCards 1 GeneTree 1 GeneWiki 1 Genevisible 1 GenomeRNAi 1 GlyCosmos 1 GlyGen 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 MANE-Select 1 MIM 5 MINT 1 MalaCards 1 MassIVE 1 MaxQB 1 MetOSite 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 14 PDBsum 5 PIR 1 PIRSF 1 PRO 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 3 Pumba 1 RNAct 1 Reactome 5 RefSeq 3 SMR 1 STRING 1 SignaLink 1 SwissPalm 1 TCDB 1 TreeFam 1 UCSC 1 UniProtKB 4 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16625196

Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.

PubMed ID: 16625196

DOI: 10.1038/nature04689

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17974005

Title: The full-ORF clone resource of the German cDNA consortium.

PubMed ID: 17974005

DOI: 10.1186/1471-2164-8-399

PubMed ID: 12643545

Title: Proteomic analysis of early melanosomes: identification of novel melanosomal proteins.

PubMed ID: 12643545

DOI: 10.1021/pr025562r

PubMed ID: 17081065

Title: Proteomic and bioinformatic characterization of the biogenesis and function of melanosomes.

PubMed ID: 17081065

DOI: 10.1021/pr060363j

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 28024296

Title: mTORC1 and muscle regeneration are regulated by the LINC00961-encoded SPAR polypeptide.

PubMed ID: 28024296

DOI: 10.1038/nature21034

PubMed ID: 33065002

Title: Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.

PubMed ID: 33065002

DOI: 10.1016/j.molcel.2020.09.029

PubMed ID: 34909687

Title: Variants in ATP6V0A1 cause progressive myoclonus epilepsy and developmental and epileptic encephalopathy.

PubMed ID: 34909687

DOI: 10.1093/braincomms/fcab245

PubMed ID: 33833240

Title: ATP6V0A1 encoding the a1-subunit of the V0 domain of vacuolar H+-ATPases is essential for brain development in humans and mice.

PubMed ID: 33833240

DOI: 10.1038/s41467-021-22389-5

Sequence Information:

  • Length: 837
  • Mass: 96413
  • Checksum: 80E4842CF6ADEE44
  • Sequence:
    • MGELFRSEEM TLAQLFLQSE AAYCCVSELG ELGKVQFRDL NPDVNVFQRK FVNEVRRCEE 
MDRKLRFVEK EIRKANIPIM DTGENPEVPF PRDMIDLEAN FEKIENELKE INTNQEALKR 
NFLELTELKF ILRKTQQFFD EMADPDLLEE SSSLLEPSEM GRGTPLRLGF VAGVINRERI 
PTFERMLWRV CRGNVFLRQA EIENPLEDPV TGDYVHKSVF IIFFQGDQLK NRVKKICEGF 
RASLYPCPET PQERKEMASG VNTRIDDLQM VLNQTEDHRQ RVLQAAAKNI RVWFIKVRKM 
KAIYHTLNLC NIDVTQKCLI AEVWCPVTDL DSIQFALRRG TEHSGSTVPS ILNRMQTNQT 
PPTYNKTNKF TYGFQNIVDA YGIGTYREIN PAPYTIITFP FLFAVMFGDF GHGILMTLFA 
VWMVLRESRI LSQKNENEMF STVFSGRYII LLMGVFSMYT GLIYNDCFSK SLNIFGSSWS 
VRPMFTYNWT EETLRGNPVL QLNPALPGVF GGPYPFGIDP IWNIATNKLT FLNSFKMKMS 
VILGIIHMLF GVSLSLFNHI YFKKPLNIYF GFIPEIIFMT SLFGYLVILI FYKWTAYDAH 
TSENAPSLLI HFINMFLFSY PESGYSMLYS GQKGIQCFLV VVALLCVPWM LLFKPLVLRR 
QYLRRKHLGT LNFGGIRVGN GPTEEDAEII QHDQLSTHSE DADEPSEDEV FDFGDTMVHQ 
AIHTIEYCLG CISNTASYLR LWALSLAHAQ LSEVLWTMVI HIGLSVKSLA GGLVLFFFFT 
AFATLTVAIL LIMEGLSAFL HALRLHWVEF QNKFYSGTGF KFLPFSFEHI REGKFEE

Genular Protein ID: 2554519332

Symbol: Q5CZH6_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q5CZH6

Database IDs:

ARBA 13 AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 GO 2 Genevisible 1 GenomeRNAi 1 IntAct 1 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 RefSeq 1 RuleBase 1 SAM 1

Sequence Information:

  • Length: 838
  • Mass: 96603
  • Checksum: 20E56A8DA482FDB7
  • Sequence:
    • MGELFRSEEM TLAQLFLQSE AAYCCVSELG ELGKVQFRDL NPDVNVFQRK FVNEVRRCEE 
MDRKLRFVEK EIRKANIPIM DTGENPEVPF PRDMIDLEAN FEKIENELKE INTNQEALKR 
NFLELTELKF ILRKTQQFFD EAELHHQQMA DPDLLEESSS LLEPSEMGRG TPLRLGFVAG 
VINRERIPTF ERMLWRVCRG NVFLRQAEIE NPLEDPVTGD YVHKSVFIIF FQGDQLKNRV 
KKICEGFRAS LYPCPETPQE RKEMASGVST RIDDLQMVLN QMEDHRQRVL QAAAKNIRVW 
FIKVRKMKAI YHTLNLCNID VTQKCLIAEV WCPVTDLDSI QFALRRGTEH SGSTVPSILN 
RMQTNQTPPT YNKTNKFTYG FQNIVDAYGI GTYREINPAP YTIITFPFLF AVMFGDFGHG 
ILMTLFAVWM VLRESRILSQ KNENEMFSTV FSGRYIILLM GVFSMYTGLI YNDCFSKSLN 
IFGSSWSVRP MFTYNWTEET LRGNPVLQLN PALPGVFGGP YPFGIDPIWN IATNKLTFLN 
SFKMKMSVIL GIIHMLFGVS LSLFNHIYFK KPLNIYFGFI PEIIFMTSLF GYLVILIFYK 
WTAYDAHTSE NAPSLLIHFI NMFLFSYPES GYSMLYSGQK GIQCFLVVVA LLCVPWMLLF 
KPLVLRRQYL RRKHLGTLNF GGIRVGNGPT EEDAEIIQHD QLSTHSEDAD EFDFGDTMVH 
QAIHTIEYCL GCISNTASYL RLWALSLAHA QLSEVLWTMV IHIGLSVKSL AGGLVLFFFF 
TAFATLTVAI LLIMEGLSAF LHALRLHWVE FQNKFYSGTG FKFLPFSFEH IREGKFEE

Genular Protein ID: 3909198861

Symbol: Q53ET5_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q53ET5

Database IDs:

ARBA 13 AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 GO 2 Genevisible 1 GenomeRNAi 1 InterPro 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 RefSeq 1 RuleBase 1 SAM 1

Citations:

PubMed ID: 8125298

Title: Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides.

PubMed ID: 8125298

DOI: 10.1016/0378-1119(94)90802-8

PubMed ID: 9373149

Title: Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library.

PubMed ID: 9373149

DOI: 10.1016/S0378-1119(97)00411-3

Sequence Information:

  • Length: 831
  • Mass: 95804
  • Checksum: 0C84BE64B8CC0D03
  • Sequence:
    • MGELFRSEEM TLAQLFLQSE AAYCCVSELG ELGKVQFRDL NPYVNVFQRK FVNEVRRCEE 
MDRKLRFVEK EIRKANIPIM DTGENPEVPF PRDMIDLEAN FEKIENELKE INTNQEALKR 
NFLELTELKF ILRKTQQFFD EMADPDLLEE SSSLLEPSEM GRGTPLRLGF VAGVINRERI 
PTFERMLWRV CRGNVFLRQA EIENPLEDPV TGDYVHKSVF IIFFQGDQLK NRVKKICEGF 
RASLYPCPET PQERKEMASG VNTRIDDLQM VLNQTEDHRQ RVLQAAAKNI RVWFIKVRKM 
KAIYHTLNLC NIDVTQKCLI AEVWCPVTDL DSIQFALRRG TEHSGSTVPS ILNRMQTNQT 
PPTYNKTNKF TYGFQNIVDA YGIGTYREIN PAPYTIITFP FLFAVMFGDF GHGILMTLFA 
VWMVLRESRI LSQKNENEMF STVFSGRYII LLMGVFSMYT GLIYNDCFSK SLNIFGSSWS 
VRPMFTYNWT EETLRGNPVL QLNPALPGVF GGPYPFGIDP IWNIATNKLT FLNSFKMKMS 
VILGIIHMLF GVSLSLFNHI YFKKPLNIYF GFIPEIIFMT SLFGYLVILI FYKWTAYDAH 
TSENAPSLLI HFINMFLFSY PESGYSMLYS GQKGIQCFLV VVALLCVPWM LLFKPLVLRR 
QYLRRKHLGT LNFGGIRVGN GPTEEDAEII QHDQLSTHSE DADEFDFGDT MVHQAIHTIE 
YCLGCISNTA SYLRLWALSL AHAQLSEVLW TMVIHIGLSV KSLAGGLVLF FFFTAFATLT 
VAILLIMEGL SAFLHALRLH WVEFQNKFYS GTGFKFLPFS FEHIREGKFE E

Genular Protein ID: 3091214484

Symbol: Q53X12_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q53X12

Database IDs:

ARBA 13 AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 GO 2 Genevisible 1 GenomeRNAi 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PeptideAtlas 1 Pfam 1 PharmGKB 1 RefSeq 3 RuleBase 1 SAM 1

Sequence Information:

  • Length: 831
  • Mass: 95751
  • Checksum: A3D85B27CA2AC55E
  • Sequence:
    • MGELFRSEEM TLAQLFLQSE AAYCCVSELG ELGKVQFRDL NPDVNVFQRK FVNEVRRCEE 
MDRKLRFVEK EIRKANIPIM DTGENPEVPF PRDMIDLEAN FEKIENELKE INTNQEALKR 
NFLELTELKF ILRKTQQFFD EMADPDLLEE SSSLLEPSEM GRGTPLRLGF VAGVINRERI 
PTFERMLWRV CRGNVFLRQA EIENPLEDPV TGDYVHKSVF IIFFQGDQLK NRVKKICEGF 
RASLYPCPET PQERKEMASG VNTRIDDLQM VLNQTEDHRQ RVLQAAAKNI RVWFIKVRKM 
KAIYHTLNLC NIDVTQKCLI AEVWCPVTDL DSIQFALRRG TEHSGSTVPS ILNRMQTNQT 
PPTYNKTNKF TYGFQNIVDA YGIGTYREIN PAPYTIITFP FLFAVMFGDF GHGILMTLFA 
VWMVLRESRI LSQKNENEMF STVFSGRYII LLMGVFSMYT GLIYNDCFSK SLNIFGSSWS 
VRPMFTYNWT EETLRGNPVL QLNPALPGVF GGPYPFGIDP IWNIATNKLT FLNSFKMKMS 
VILGIIHMLF GVSLSLFNHI YFKKPLNIYF GFIPEIIFMT SLFGYLVILI FYKWTAYDAH 
TSENAPSLLI HFINMFLFSY PESGYSMLYS GQKGIQCFLV VVALLCVPWM LLFKPLVLRR 
QYLRRKHLGT LNFGGIRVGN GPTEEDAEII QHDQLSTHSE DADEFDFGDT MVHQAIHTIE 
YCLGCISNTA SYLRLWALSL AHAHVSEVLW TMVIHIGLSV KSLAGGLVLF FFFTAFATLT 
VAILLIMEGL SAFLHALRLH WVEFQNKFYS GTGFKFLPFS FEHIREGKFE E

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. For the full schema, download it here.