Details for: cic

Gene ID: 53560

Symbol: cic

Ensembl ID: FBgn0262582

Description: capicua

Associated with

  • Cytosol
    (GO:0005829)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna-binding transcription factor binding
    (GO:0140297)
  • Dna-binding transcription repressor activity, rna polymerase ii-specific
    (GO:0001227)
  • Dorsal/ventral pattern formation
    (GO:0009953)
  • Dorsal appendage formation
    (GO:0046843)
  • Epidermal growth factor receptor signaling pathway
    (GO:0007173)
  • Eye morphogenesis
    (GO:0048592)
  • Imaginal disc-derived wing vein specification
    (GO:0007474)
  • Maternal specification of dorsal/ventral axis, oocyte, soma encoded
    (GO:0007313)
  • Negative regulation of cell growth
    (GO:0030308)
  • Negative regulation of organ growth
    (GO:0046621)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)
  • Sequence-specific dna binding
    (GO:0043565)
  • Terminal region determination
    (GO:0007362)
  • Torso signaling pathway
    (GO:0008293)
  • Wing disc dorsal/ventral pattern formation
    (GO:0048190)

Other Information

Genular Protein ID: 3625955183

Symbol: CIC_DROME

Name: Putative transcription factor capicua

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10652276

Title: Relief of gene repression by torso RTK signaling: role of capicua in Drosophila terminal and dorsoventral patterning.

PubMed ID: 10652276

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 11714680

Title: Establishment of dorsal-ventral polarity of the Drosophila egg requires capicua action in ovarian follicle cells.

PubMed ID: 11714680

DOI: 10.1242/dev.128.22.4553

PubMed ID: 11861482

Title: EGFR signalling inhibits capicua-dependent repression during specification of Drosophila wing veins.

PubMed ID: 11861482

DOI: 10.1242/dev.129.4.993

PubMed ID: 15510215

Title: Capicua integrates input from two maternal systems in Drosophila terminal patterning.

PubMed ID: 15510215

DOI: 10.1038/sj.emboj.7600457

PubMed ID: 18327897

Title: Phosphoproteome analysis of Drosophila melanogaster embryos.

PubMed ID: 18327897

DOI: 10.1021/pr700696a

Sequence Information:

  • Length: 1832
  • Mass: 195662
  • Checksum: 1D2A2A8537BFB4D8
  • Sequence:
  • MNAFQDFELG AKLYLQCLLS LSSSRSATPS YTSPVNHAGA SPLNAIAHSP VNVSATHRQN 
    FFTPIANQSQ QQQQQQPVAV PLDSKWKTTP SPVLYNANNN SSNNNTSSSN NNNNSNWEVG 
    SNSNTHVAAT AAATSTVGAQ PLPPQTTPVS LVMHAPPPQQ QPLQQQHHHH QPPPPPPASL 
    PAPSAPPTSG SSSSHNSVGH ATSVIRISSS QQQHQQQQQH QQQAHPHVVV SGGQTFHPVI 
    VDATQLSVPL PPTTVSFHQP NTPTSTAASV ASMSQDKMLA KNGYNAPWFK LLPHMTPMSK 
    ASPAPVTPTL TTSASSYNVV MMQQQQQHQQ LQQQQQLQQQ QQSPPQMPLN HNNNHLIVSA 
    PLSSPGKPLN CSMNDAKVAA AAAAAAVANQ RQKQQQEEPD DQLDDDVFET TTPGISANSK 
    KQTAAMRLPT HNSNIRKLEE CHDDGAAGAP ATSAAKRRSQ SLSALQQQQQ QQQQAGAAGT 
    AAGQPANKKI RRPMNAFMIF SKKHRKMVHK KHPNQDNRTV SKILGEWWYA LKPEQKAQYH 
    ELASSVKDAH FKLHPEWKWC SKDRRKSSTS TATPGGKASG AAGTGDAKQR LVSVDGSDSL 
    EHDMCPSTPG GSGSCGGQGI SSDLQGDIIP LTIDNYNSTC DEAPTTISMK GNGNGKLMKN 
    ELPSDEDEQM LVVEEEQQQQ TVKKIDLHCR ERVNDSDMDD TPFDYRKQQP EANQRSAEEH 
    STSGANGQAI NAPPLSGGER EITLKPKAIK AHPVLESNML PYTQMSIYTQ YTSPKNPIGV 
    TPFQPTGGAF KSMPISPKGS GGKPEDAGSL QAHIKQEDIK QEPPSPYKLN NGSGSASGGG 
    VVSAPPPNSG SVGAIFNFNV PTATALSQKQ FHYPMHHPHR SPTDLRDEEA DREEITQGTK 
    SGESSEKDKP ALDDQERDEV EEEDEDEEDD DEDDEDDEQF MQELASVNAS AGFDDLVPYA 
    MPKVVITPTP TPPPVATIVT PIKRKQFTIV RSLTPLQPSN SPHQQLKHLH QRRGETPPTV 
    ITRVPTPTIN HFTIIRTQQH PHTHPHNTPP PLFFKQKVQG SPVIATVTTS TLSSSSSNPA 
    NNEAPNKFSN FPTQHQPTTT TTISCNTNNN ATPIIRKLLT LQEGAELGGS HKGTGRAAIL 
    YDALVLDTLH GQDEEEEEDE GNAEKQENPK VAGKEQVTTS QPATMLLITD VNAYNQQHVA 
    GNAATPVSGA ATLRPVSFIS INACNKITLP ANARILTAAT ATSTAAGAAV TSQAGATLTV 
    MTKASAATNH SSSNASDITI TAASAAPVPT SGSSIVMINS TTNPSTSSNS TSCSAAAHQA 
    CVPSSPAGMG LGHAANIATP PASAPAQIMG GGPASQKMFF AMTHPYTLLQ RSHQPGTPSL 
    EHLQLDAFAP GGYTLRNHNG LSSLPPPVSA QPTMLLHGYP PSHGVEPPAR SPSYKSMPST 
    PKSATYLMSA PPERGMDGGM SGCASAAASG GDESDIDADG QQFILAPTPA QLGRAPLQRR 
    KNLSQSKSES NVSFGANLGA SNGQHISRKL HSPTMMESSS PIIGHVNSSN LSSALPTPTS 
    STTTPNSDEQ LPLTPTTSSS NSNLNQQQPK SPMKGAPGST AAALKKKNDE MNNSVLKQVD 
    FEKKYKALPQ FQPEDCQSPS AIAVPSSPRV YGTNYRKKNT APPPVQKLMC EDDSIDEPAS 
    APPTTTQRFF GPDFNNELKE LESSDQTGRS PRTPKTPLQS ARSDASEKGH RKVLETRRSL 
    VLQLFAEHGN FPTAQATMAF QSKHSDVFPR KQDLQLKIRE VRQKLLGQAS CTPHSAGPNT 
    PSDSNSSSTT LSASSTSLNM QTTSAADVFQ YY

Genular Protein ID: 209123913

Symbol: A0A0B4KGD7_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 2150
  • Mass: 231576
  • Checksum: C9F5792804AA01D8
  • Sequence:
  • MLSAANATAT ATHGAAAVAI AAAETYVITN KQQQQQQQQV FVVAANKMVI PATGATIAGI 
    PTATTTAAAE STATQQHQQH QQQQQQQQHV LFQPHLQTTT ATAATCSTPQ QQQPPQPRQH 
    PKKRKFDPAE LDKTEQHPQQ QQQQQVSLQK QQKPAETTGN GDGLANGNQQ HRMIVSCGAG 
    AGNNSSNSSS SNNSSHSSSD IKQQQQQRII IASPQHASGS TYKQHVASGN NSHAATINHQ 
    QRTHTPTTAV YYQQQQQQQQ QQQQQRFSFN SNNQQHLQEQ HQQQQQQQSL LDLSEWNNTR 
    VLAKIQNNYA PGIIRHAQEA SPDSILVEFD STDLGLLLYT DVLHQGRNHV ILDASPPMAD 
    ITLDARVCVR QRVEGRGSGS FVYVEGIITD INQATKQYSV QLIGDEMATT KVVRRADLRL 
    LQPPWWDELN ELTTSGGASA PASSAKRKVP AAGAGAGTGA AGCEAMTVPS GNIVYPKTAT 
    GAPLSFVATR YDGKLPTAPP TSSHQQAQQQ LVKQEEYYRT TATSPFQTRP PLAGPSHGSE 
    QVVQATQSHP QQYNGLADIV ISPCSNGQHL KMQQQQQQSS RGYDDYDSDD ELKRVGIGYS 
    PAAGDLDTEK MSACSKRSSM QSRGSTSSLL DQRLTPRSHP ATPSAIHRSQ ATTPHRFKKG 
    DIVESESGVR KKYNGKQWRR LCMLCTKESQ RRGYCSRHLN QKGNTSALPS STGPGRLLSD 
    SRSSSKTQID EDTSRDSETS PNYRVKGRYD QEETDAAAML VSLSSSRSAT PSYTSPVNHA 
    GASPLNAIAH SPVNVSATHR QNFFTPIANQ SQQQQQQQPV AVPLDSKWKT TPSPVLYNAN 
    NNSSNNNTSS SNNNNNSNWE VGSNSNTHVA ATAAATSTVG AQPLPPQTTP VSLVMHAPPP 
    QQQPLQQQHH HHQPPPPPPA SLPAPSAPPT SGSSSSHNSV GHATSVIRIS SSQQQHQQQQ 
    QHQQQAHPHV VVSGGQTFHP VIVDATQLSV PLPPTTVSFH QPNTPTSTAA SVASMSQDKM 
    LAKNGYNAPW FKLLPHMTPM SKASPAPVTP TLTTSASSYN VVMMQQQQQH QQLQQQQQLQ 
    QQQQSPPQMP LNHNNNHLIV SAPLSSPGKP LNCSMNDAKV AAAAAAAAVA NQRQKQQQEE 
    PDDQLDDDVF ETTTPGISAN SKKQTAAMRL PTHNSNIRKL EECHDDGAAG APATSAAKRR 
    SQSLSALQQQ QQQQQQAGAA GTAAGQPANK KIRRPMNAFM IFSKKHRKMV HKKHPNQDNR 
    TVSKILGEWW YALKPEQKAQ YHELASSVKD AHFKLHPEWK WCSKDRRKSS TSTATPGGKA 
    SGAAGTGDAK QRLVSVDGSD SLEHDMCPST PGGSGSCGGQ GISSDLQGDI IPLTIDNYNS 
    TCDEAPTTIS MKGNGNGKLM KNELPSDEDE QMLVVEEEQQ QQTVKKIDLH CRERVNDSDM 
    DDTPFDYRKQ QPEANQRSAE EHSTSGANGQ AINAPPLSGG EREITLKPKA IKAHPVLESN 
    MLPYTQMSIY TQYTSPKNPI GVTPFQPTGG AFKSMPISPK GSGGKPEDAG SLQAHIKQED 
    IKQEPPSPYK LNNGSGSASG GGVVSAPPPN SGSVGAIFNF NVPTATALSQ KQFHYPMHHP 
    HRSPTDLRAA HQACVPSSPA GMGLGHAANI ATPPASAPAQ IMGGGPASQK MFFAMTHPYT 
    LLQRSHQPGT PSLEHLQLDA FAPGGYTLRN HNGLSSLPPP VSAQPTMLLH GYPPSHGVEP 
    PARSPSYKSM PSTPKSATYL MSAPPERGMD GGMSGCASAA ASGGDESDID ADGQQFILAP 
    TPAQLGRAPL QRRKNLSQSK SESNVSFGAN LGASNGQHIS RKLHSPTMME SSSPIIGHVN 
    SSNLSSALPT PTSSTTTPNS DEQLPLTPTT SSSNSNLNQQ QPKSPMKGAP GSTAAALKKK 
    NDEMNNSVLK QVDFEKKYKA LPQFQPEDCQ SPSAIAVPSS PRVYGTNYRK KNTAPPPVQK 
    LMCEDDSIDE PASAPPTTTQ RFFGPDFNNE LKDERLAELE SSDQTGRSPR TPKTPLQSAR 
    SDASEKGHRK VLETRRSLVL QLFAEHGNFP TAQATMAFQS KHSDVFPRKQ DLQLKIREVR 
    QKLLGQASCT PHSAGPNTPS DSNSSSTTLS ASSTSLNMQT TSAADVFQYY

Genular Protein ID: 4009856472

Symbol: A0A0B4K778_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 1427
  • Mass: 152671
  • Checksum: D918CF16122D598C
  • Sequence:
  • MNAFQDFELG AKLYLQCLLS LSSSRSATPS YTSPVNHAGA SPLNAIAHSP VNVSATHRQN 
    FFTPIANQSQ QQQQQQPVAV PLDSKWKTTP SPVLYNANNN SSNNNTSSSN NNNNSNWEVG 
    SNSNTHVAAT AAATSTVGAQ PLPPQTTPVS LVMHAPPPQQ QPLQQQHHHH QPPPPPPASL 
    PAPSAPPTSG SSSSHNSVGH ATSVIRISSS QQQHQQQQQH QQQAHPHVVV SGGQTFHPVI 
    VDATQLSVPL PPTTVSFHQP NTPTSTAASV ASMSQDKMLA KNGYNAPWFK LLPHMTPMSK 
    ASPAPVTPTL TTSASSYNVV MMQQQQQHQQ LQQQQQLQQQ QQSPPQMPLN HNNNHLIVSA 
    PLSSPGKPLN CSMNDAKVAA AAAAAAVANQ RQKQQQEEPD DQLDDDVFET TTPGISANSK 
    KQTAAMRLPT HNSNIRKLEE CHDDGAAGAP ATSAAKRRSQ SLSALQQQQQ QQQQAGAAGT 
    AAGQPANKKI RRPMNAFMIF SKKHRKMVHK KHPNQDNRTV SKILGEWWYA LKPEQKAQYH 
    ELASSVKDAH FKLHPEWKWC SKDRRKSSTS TATPGGKASG AAGTGDAKQR LVSVDGSDSL 
    EHDMCPSTPG GSGSCGGQGI SSDLQGDIIP LTIDNYNSTC DEAPTTISMK GNGNGKLMKN 
    ELPSDEDEQM LVVEEEQQQQ TVKKIDLHCR ERVNDSDMDD TPFDYRKQQP EANQRSAEEH 
    STSGANGQAI NAPPLSGGER EITLKPKAIK AHPVLESNML PYTQMSIYTQ YTSPKNPIGV 
    TPFQPTGGAF KSMPISPKGS GGKPEDAGSL QAHIKQEDIK QEPPSPYKLN NGSGSASGGG 
    VVSAPPPNSG SVGAIFNFNV PTATALSQKQ FHYPMHHPHR SPTDLRAAHQ ACVPSSPAGM 
    GLGHAANIAT PPASAPAQIM GGGPASQKMF FAMTHPYTLL QRSHQPGTPS LEHLQLDAFA 
    PGGYTLRNHN GLSSLPPPVS AQPTMLLHGY PPSHGVEPPA RSPSYKSMPS TPKSATYLMS 
    APPERGMDGG MSGCASAAAS GGDESDIDAD GQQFILAPTP AQLGRAPLQR RKNLSQSKSE 
    SNVSFGANLG ASNGQHISRK LHSPTMMESS SPIIGHVNSS NLSSALPTPT SSTTTPNSDE 
    QLPLTPTTSS SNSNLNQQQP KSPMKGAPGS TAAALKKKND EMNNVLKQVD FEKKYKALPQ 
    FQPEDCQSPS AIAVPSSPRV YGTNYRKKNT APPPVQKLMC EDDSIDEPAS APPTTTQRFF 
    GPDFNNELKD ERLAELESSD QTGRSPRTPK TPLQSARSDA SEKGHRKVLE TRRSLVLQLF 
    AEHGNFPTAQ ATMAFQSKHS DVFPRKQDLQ LKIREVRQKL LGQASCTPHS AGPNTPSDSN 
    SSSTTLSASS TSLNMQTTSA AGGHQQQHSE QQPHSATKAT ESDAKYK

Genular Protein ID: 1288976120

Symbol: A0A0B4K6D6_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 1275
  • Mass: 136613
  • Checksum: 3E098284E27F39F3
  • Sequence:
  • MHAPPPQQQP LQQQHHHHQP PPPPPASLPA PSAPPTSGSS SSHNSVGHAT SVIRISSSQQ 
    QHQQQQQHQQ QAHPHVVVSG GQTFHPVIVD ATQLSVPLPP TTVSFHQPNT PTSTAASVAS 
    MSQDKMLAKN GYNAPWFKLL PHMTPMSKAS PAPVTPTLTT SASSYNVVMM QQQQQHQQLQ 
    QQQQLQQQQQ SPPQMPLNHN NNHLIVSAPL SSPGKPLNCS MNDAKVAAAA AAAAVANQRQ 
    KQQQEEPDDQ LDDDVFETTT PGISANSKKQ TAAMRLPTHN SNIRKLEECH DDGAAGAPAT 
    SAAKRRSQSL SALQQQQQQQ QQAGAAGTAA GQPANKKIRR PMNAFMIFSK KHRKMVHKKH 
    PNQDNRTVSK ILGEWWYALK PEQKAQYHEL ASSVKDAHFK LHPEWKWCSK DRRKSSTSTA 
    TPGGKASGAA GTGDAKQRLV SVDGSDSLEH DMCPSTPGGS GSCGGQGISS DLQGDIIPLT 
    IDNYNSTCDE APTTISMKGN GNGKLMKNEL PSDEDEQMLV VEEEQQQQTV KKIDLHCRER 
    VNDSDMDDTP FDYRKQQPEA NQRSAEEHST SGANGQAINA PPLSGGEREI TLKPKAIKAH 
    PVLESNMLPY TQMSIYTQYT SPKNPIGVTP FQPTGGAFKS MPISPKGSGG KPEDAGSLQA 
    HIKQEDIKQE PPSPYKLNNG SGSASGGGVV SAPPPNSGSV GAIFNFNVPT ATALSQKQFH 
    YPMHHPHRSP TDLRAAHQAC VPSSPAGMGL GHAANIATPP ASAPAQIMGG GPASQKMFFA 
    MTHPYTLLQR SHQPGTPSLE HLQLDAFAPG GYTLRNHNGL SSLPPPVSAQ PTMLLHGYPP 
    SHGVEPPARS PSYKSMPSTP KSATYLMSAP PERGMDGGMS GCASAAASGG DESDIDADGQ 
    QFILAPTPAQ LGRAPLQRRK NLSQSKSESN VSFGANLGAS NGQHISRKLH SPTMMESSSP 
    IIGHVNSSNL SSALPTPTSS TTTPNSDEQL PLTPTTSSSN SNLNQQQPKS PMKGAPGSTA 
    AALKKKNDEM NNVLKQVDFE KKYKALPQFQ PEDCQSPSAI AVPSSPRVYG TNYRKKNTAP 
    PPVQKLMCED DSIDEPASAP PTTTQRFFGP DFNNELKDER LAELESSDQT GRSPRTPKTP 
    LQSARSDASE KGHRKVLETR RSLVLQLFAE HGNFPTAQAT MAFQSKHSDV FPRKQDLQLK 
    IREVRQKLLG QASCTPHSAG PNTPSDSNSS STTLSASSTS LNMQTTSAAG GHQQQHSEQQ 
    PHSATKATES DAKYK

Genular Protein ID: 4078469143

Symbol: A0A0B4K698_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 2141
  • Mass: 230583
  • Checksum: 965ED6E744892EC3
  • Sequence:
  • MLSAANATAT ATHGAAAVAI AAAETYVITN KQQQQQQQQV FVVAANKMVI PATGATIAGI 
    PTATTTAAAE STATQQHQQH QQQQQQQQHV LFQPHLQTTT ATAATCSTPQ QQQPPQPRQH 
    PKKRKFDPAE LDKTEQHPQQ QQQQQVSLQK QQKPAETTGN GDGLANGNQQ HRMIVSCGAG 
    AGNNSSNSSS SNNSSHSSSD IKQQQQQRII IASPQHASGS TYKQHVASGN NSHAATINHQ 
    QRTHTPTTAV YYQQQQQQQQ QQQQQRFSFN SNNQQHLQEQ HQQQQQQQSL LDLSEWNNTR 
    VLAKIQNNYA PGIIRHAQEA SPDSILVEFD STDLGLLLYT DVLHQGRNHV ILDASPPMAD 
    ITLDARVCVR QRVEGRGSGS FVYVEGIITD INQATKQYSV QLIGDEMATT KVVRRADLRL 
    LQPPWWDELN ELTTSGGASA PASSAKRKVP AAGAGAGTGA AGCEAMTVPS GNIVYPKTAT 
    GAPLSFVATR YDGKLPTAPP TSSHQQAQQQ LVKQEEYYRT TATSPFQTRP PLAGPSHGSE 
    QVVQATQSHP QQYNGLADIV ISPCSNGQHL KMQQQQQQSS RGYDDYDSDD ELKRVGIGYS 
    PAAGDLDTEK MSACSKRSSM QSRGSTSSLL DQRLTPRSHP ATPRSQATTP HRFKKGDIVE 
    SESGVRKKYN GKQWRRLCML CTKESQRRGY CSRHLNQKGN TSALPSSTGP GRLLSDSRSS 
    SKTQIDEDTS RDSETSPNYR VKGRYDQEET DAAAMLVSLS SSRSATPSYT SPVNHAGASP 
    LNAIAHSPVN VSATHRQNFF TPIANQSQQQ QQQQPVAVPL DSKWKTTPSP VLYNANNNSS 
    NNNTSSSNNN NNSNWEVGSN SNTHVAATAA ATSTVGAQPL PPQTTPVSLV MHAPPPQQQP 
    LQQQHHHHQP PPPPPASLPA PSAPPTSGSS SSHNSVGHAT SVIRISSSQQ QHQQQQQHQQ 
    QAHPHVVVSG GQTFHPVIVD ATQLSVPLPP TTVSFHQPNT PTSTAASVAS MSQDKMLAKN 
    GYNAPWFKLL PHMTPMSKAS PAPVTPTLTT SASSYNVVMM QQQQQHQQLQ QQQQLQQQQQ 
    SPPQMPLNHN NNHLIVSAPL SSPGKPLNCS MNDAKVAAAA AAAAVANQRQ KQQQEEPDDQ 
    LDDDVFETTT PGISANSKKQ TAAMRLPTHN SNIRKLEECH DDGAAGAPAT SAAKRRSQSL 
    SALQQQQQQQ QQAGAAGTAA GQPANKKIRR PMNAFMIFSK KHRKMVHKKH PNQDNRTVSK 
    ILGEWWYALK PEQKAQYHEL ASSVKDAHFK LHPEWKWCSK DRRKSSTSTA TPGGKASGAA 
    GTGDAKQRLV SVDGSDSLEH DMCPSTPGGS GSCGGQGISS DLQGDIIPLT IDNYNSTCDE 
    APTTISMKGN GNGKLMKNEL PSDEDEQMLV VEEEQQQQTV KKIDLHCRER VNDSDMDDTP 
    FDYRKQQPEA NQRSAEEHST SGANGQAINA PPLSGGEREI TLKPKAIKAH PVLESNMLPY 
    TQMSIYTQYT SPKNPIGVTP FQPTGGAFKS MPISPKGSGG KPEDAGSLQA HIKQEDIKQE 
    PPSPYKLNNG SGSASGGGVV SAPPPNSGSV GAIFNFNVPT ATALSQKQFH YPMHHPHRSP 
    TDLRAAHQAC VPSSPAGMGL GHAANIATPP ASAPAQIMGG GPASQKMFFA MTHPYTLLQR 
    SHQPGTPSLE HLQLDAFAPG GYTLRNHNGL SSLPPPVSAQ PTMLLHGYPP SHGVEPPARS 
    PSYKSMPSTP KSATYLMSAP PERGMDGGMS GCASAAASGG DESDIDADGQ QFILAPTPAQ 
    LGRAPLQRRK NLSQSKSESN VSFGANLGAS NGQHISRKLH SPTMMESSSP IIGHVNSSNL 
    SSALPTPTSS TTTPNSDEQL PLTPTTSSSN SNLNQQQPKS PMKGAPGSTA AALKKKNDEM 
    NNSVLKQVDF EKKYKALPQF QPEDCQSPSA IAVPSSPRVY GTNYRKKNTA PPPVQKLMCE 
    DDSIDEPASA PPTTTQRFFG PDFNNELKEL ESSDQTGRSP RTPKTPLQSA RSDASEKGHR 
    KVLETRRSLV LQLFAEHGNF PTAQATMAFQ SKHSDVFPRK QDLQLKIREV RQKLLGQASC 
    TPHSAGPNTP SDSNSSSTTL SASSTSLNMQ TTSAADVFQY Y

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.