Scfd1 | ENSRNOG00000031203 | NCBI 54350

Details for: Scfd1

Gene ID: 54350

Symbol: Scfd1

Ensembl ID: ENSRNOG00000031203

Description: sec1 family domain containing 1

Associated with

Asparagine n-linked glycosylation
(R-RNO-446203)
Copii-mediated vesicle transport
(R-RNO-204005)
Er to golgi anterograde transport
(R-RNO-199977)
Membrane trafficking
(R-RNO-199991)
Metabolism of proteins
(R-RNO-392499)
Post-translational protein modification
(R-RNO-597592)
Rhoa gtpase cycle
(R-RNO-8980692)
Rho gtpase cycle
(R-RNO-9012999)
Signaling by rho gtpases
(R-RNO-194315)
Signaling by rho gtpases, miro gtpases and rhobtb3
(R-RNO-9716542)
Signal transduction
(R-RNO-162582)
Transport to the golgi and subsequent modification
(R-RNO-948021)
Cell morphogenesis
(GO:0000902)
Cis-golgi network
(GO:0005801)
Endoplasmic reticulum membrane
(GO:0005789)
Endoplasmic reticulum to golgi vesicle-mediated transport
(GO:0006888)
Golgi-associated vesicle
(GO:0005798)
Golgi cisterna membrane
(GO:0032580)
Golgi membrane
(GO:0000139)
Intracellular protein transport
(GO:0006886)
Negative regulation of autophagosome assembly
(GO:1902902)
Post-golgi vesicle-mediated transport
(GO:0006892)
Protein-containing complex binding
(GO:0044877)
Protein binding
(GO:0005515)
Protein transport
(GO:0015031)
Regulation of er to golgi vesicle-mediated transport
(GO:0060628)
Regulation of protein transport
(GO:0051223)
Response to hypoxia
(GO:0001666)
Response to toxic substance
(GO:0009636)
Retrograde vesicle-mediated transport, golgi to endoplasmic reticulum
(GO:0006890)
Syntaxin binding
(GO:0019905)
Vesicle-mediated transport
(GO:0016192)

Other Information

Proteins

Sec1 family domain-containing protein 1

Genular Protein ID: 900477402

Symbol: SCFD1_RAT

Name: Sec1 family domain-containing protein 1

UniProtKB Accession Codes:

Q62991 Q62843

Database IDs:

Citations:

PubMed ID: 8663406

Title: Mammalian Sly1 regulates syntaxin 5 function in endoplasmic reticulum to Golgi transport.

PubMed ID: 8663406

DOI: 10.1074/jbc.271.27.15866

PubMed ID: 9195952

Title: Cloning of a putative vesicle transport-related protein, RA410, from cultured rat astrocytes and its expression in ischemic rat brain.

PubMed ID: 9195952

DOI: 10.1074/jbc.272.26.16438

PubMed ID: 8647468

Title: A mammalian homologue of SLY1, a yeast gene required for transport from endoplasmic reticulum to Golgi.

PubMed ID: 8647468

DOI: 10.1016/0378-1119(95)00819-5

PubMed ID: 10930465

Title: Syntaxin 17 is abundant in steroidogenic cells and implicated in smooth endoplasmic reticulum membrane dynamics.

PubMed ID: 10930465

DOI: 10.1091/mbc.11.8.2719

PubMed ID: 19536132

Title: Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing.

PubMed ID: 19536132

DOI: 10.1038/emboj.2009.168

PubMed ID: 22673903

Title: Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues.

PubMed ID: 22673903

DOI: 10.1038/ncomms1871

Sequence Information:

Length: 637
Mass: 72263
Checksum: 9ABFBBEBD2862341
Sequence:

MVGSKMAASI RERQTVALKR MLNFNVPHVK NSPGEPVWKV LIYDRFGQDI ISPLLSVKEL 
RDMGITLHLL LHSDRDPIRD VPAVYFVMPT EENIDRLCQD LRNQLYESYY LNFISAISRS 
KLEDIANAAL AANAVTQVAK VFDQYLNFIT LEEDMFVLCN QNKELVSYRA INRPDITDTE 
METVMDTIVD SLFCFFVTLG AVPIIRCSRG TAAEMVAVKL DKKLRENLRD ARNSLFTGDP 
LGTGQFSFQR PLLVLVDRNI DLATPLHHTW TYQALVHDVL DFHLNRVNLE ESTGVENSPT 
GARPKRKNKK SYDLTPVDKF WQKHKGSPFP EVAESVQQEL ESYRAQEDEV KRLKSIMGLE 
GEDEGAISML SDNTAKLTSA VSSLPELLEK KRLIDLHTNV ATAVLEHIKA RKLDVYFEYE 
EKIMSKTTLD KSLLDVISDP DAGTPEDKMR LFLIYYISAQ QAPSEVDLEQ YKKALTDAGC 
NLSPLQYIKQ WKAFAKMAST PASYGNTTTK PMGLLSRVMN TGSQFVMEGV KNLVLKQQNL 
PVTRILDNLM EMKSNPETDD YRYFDPKMLR SNDSSVPRNK SPFQEAIVFV VGGGNYIEYQ 
NLVDYIKGKQ GKHILYGCSE IFNATQFIKQ LSQLGQK

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Scfd1

Associated with

Other Information

Mammalian Sly1 regulates syntaxin 5 function in endoplasmic reticulum to Golgi transport. PubMed ID: 8663406

Cloning of a putative vesicle transport-related protein, RA410, from cultured rat astrocytes and its expression in ischemic rat brain. PubMed ID: 9195952

A mammalian homologue of SLY1, a yeast gene required for transport from endoplasmic reticulum to Golgi. PubMed ID: 8647468

Syntaxin 17 is abundant in steroidogenic cells and implicated in smooth endoplasmic reticulum membrane dynamics. PubMed ID: 10930465

Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing. PubMed ID: 19536132