Details for: Cpsf3

Gene ID: 54451

Symbol: Cpsf3

Ensembl ID: ENSMUSG00000054309

Description: cleavage and polyadenylation specificity factor 3

Associated with

Other Information

Genular Protein ID: 1248548364

Symbol: CPSF3_MOUSE

Name: Cleavage and polyadenylation specificity factor subunit 3

UniProtKB Accession Codes:

Q9QXK7 Q8CIM0

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChEBI 9 ChiTaRS 1 DNASU 1 EMBL 2 EPD 1 Ensembl 1 ExpressionAtlas 1 GO 11 Gene3D 2 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 MGI 1 MaxQB 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRO 1 PaxDb 1 PeptideAtlas 1 Pfam 4 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 Pumba 1 RNAct 1 Reactome 5 RefSeq 1 SMART 3 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 UniProtKB 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 16213211

Title: The polyadenylation factor CPSF-73 is involved in histone-pre-mRNA processing.

PubMed ID: 16213211

DOI: 10.1016/j.cell.2005.08.002

PubMed ID: 16115198

Title: Smicl is a novel Smad interacting protein and cleavage and polyadenylation specificity factor associated protein.

PubMed ID: 16115198

DOI: 10.1111/j.1365-2443.2005.00887.x

PubMed ID: 18955505

Title: Studies of the 5' exonuclease and endonuclease activities of CPSF-73 in histone pre-mRNA processing.

PubMed ID: 18955505

DOI: 10.1128/mcb.00776-08

PubMed ID: 19470752

Title: Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA.

PubMed ID: 19470752

DOI: 10.1128/mcb.00296-09

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 26255770

Title: A biogenesis step upstream of microprocessor controls miR-17~92 expression.

PubMed ID: 26255770

DOI: 10.1016/j.cell.2015.07.008

PubMed ID: 29804889

Title: An intermediate pluripotent state controlled by microRNAs is required for the naive-to-primed stem cell transition.

PubMed ID: 29804889

DOI: 10.1016/j.stem.2018.04.021

Sequence Information:

  • Length: 684
  • Mass: 77505
  • Checksum: 043D09F54284B423
  • Sequence:
    • MSAIPAEESD QLLIRPLGAG QEVGRSCIIL EFKGRKIMLD CGIHPGLEGM DALPYIDLID 
PAEIDLLLIS HFHLDHCGAL PWFLQKTSFK GRTFMTHATK AIYRWLLSDY VKVSNISADD 
MLYTETDLEE SMDKIETINF HEVKEVAGIK FWCYHAGHVL GAAMFMIEIA GVKLLYTGDF 
SRQEDRHLMA AEIPNIKPDI LIIESTYGTH IHEKREEREA RFCNTVHDIV NRGGRGLIPV 
FALGRAQELL LILDEYWQNH PELHDIPIYY ASSLAKKCMA VYQTYVNAMN DKIRKQININ 
NPFVFKHISN LKSMDHFDDI GPSVVMASPG MIQNGLSREL FESWCTDKRN GVIIAGYCVE 
GTLAKHIMSE PEEITTMSGQ KLPLKMSVDY ISFSAHTDYQ QTSEFIRALK PPHVILVHGE 
QNEMARLKAA LIREYEDNDE VHIEVHNPRN TEAVTLNFRG EKLAKVMGFL ADKKPEQGQR 
VSGILVKRNF NYHILSPCDL SNYTDLAMST VKQTQAIPYT GPFYLLYYQL QKLTGDVEEL 
EIQEKPALKV FKSITVVQEP GMVVLEWLAN PSNDMYADTV TTVILEVQSN PKIRKGAVQK 
VSKKLEMHVY SKRLEVMLQD IFGEDCVSVK DDSVLSVTVD GKTANINLET RAVECEEGSE 
DDESLREMVE LAAQRLYEAL TPVH

Genular Protein ID: 243074218

Symbol: Q3UDS1_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UDS1

Database IDs:

AGR 1 ARBA 4 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EPD 1 GO 2 Gene3D 2 Genevisible 1 Google 1 InterPro 5 KEGG 1 MGI 2 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PeptideAtlas 1 Pfam 4 RefSeq 1 SMART 6 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 684
  • Mass: 77604
  • Checksum: 7F4D145E34DDC5F0
  • Sequence:
    • MSAIPAEESD QLLIRPLGAG QEVGRSCIIL EFKGRKIMLD CGIHPGLEGM DALPYIDLID 
PAEIDLLLIS HFHLDHCGAL PWFLQKTSFK GRTFMTHATK AIYRWLLSDY VKVSNISADD 
MLYTETDLEE SMDKIETINF HEVKEVAGIK FWCYHAGHVL GAAMFMIEIA GVKLLYTGDF 
SRQEDRHLMA AEIPNIKPDI LIIESTYRTH IHEKREEREA RFCNTVHDIV NRGGRGLIPV 
FALGRAQELL LILDEYWQNH PELHDIPIYY ASSLAKKCMA VYQTYVNAMN DKIRKQININ 
NPFVFKHISN LKSMDHFDDI GPSVVMASPG MIQNGLSREL FESWCTDKRN GVIIAGYCVE 
GTLAKHIMSE PEEITTMSGQ KLPLKMSVDY ISFSAHTDYQ QTSEFIRALK PPHVILVHGE 
QNEMARLKAA LIREYEDNDE VHIEVHNPRN TEAVTLNFRG EKLAKVMGFL ADKKPEQGQR 
VSGILVKRNF NYHILSPCDL SNYTDLAMST VKQTQAIPYT GPFYLLYYQL QKLTGDVEEL 
EIQEKPALKV FKSITVVQEP GMVVLEWLAN PSNDMYADTV TTVILEVQSN PKIRKGAVQK 
VSKKLEMHVY SKRLEVMLQD IFGEDCVSVK DDSVLSVTVD GKTANINLET RAVECEEGSE 
DDESLREMVE LAAQRLYEAL TPVH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.