Details for: Syncrip

Gene ID: 56403

Symbol: Syncrip

Ensembl ID: ENSMUSG00000032423

Description: synaptotagmin binding, cytoplasmic RNA interacting protein

Associated with

Other Information

Genular Protein ID: 2822257447

Symbol: HNRPQ_MOUSE

Name: Heterogeneous nuclear ribonucleoprotein Q

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10734137

Title: SYNCRIP, a cytoplasmic counterpart of heterogeneous nuclear ribonucleoprotein R, interacts with ubiquitous synaptotagmin isoforms.

PubMed ID: 10734137

DOI: 10.1074/jbc.275.13.9823

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11994298

Title: Identification of pp68 as the tyrosine-phosphorylated form of SYNCRIP/NSAP1. A cytoplasmic RNA-binding protein.

PubMed ID: 11994298

DOI: 10.1074/jbc.m202556200

PubMed ID: 9847309

Title: A novel heterogeneous nuclear ribonucleoprotein-like protein interacts with NS1 of the minute virus of mice.

PubMed ID: 9847309

DOI: 10.1128/jvi.73.1.72-80.1999

PubMed ID: 11773003

Title: Specific interaction of Smn, the spinal muscular atrophy determining gene product, with hnRNP-R and gry-rbp/hnRNP-Q: a role for Smn in RNA processing in motor axons?

PubMed ID: 11773003

DOI: 10.1093/hmg/11.1.93

PubMed ID: 19470752

Title: Three proteins of the U7-specific Sm ring function as the molecular ruler to determine the site of 3'-end processing in mammalian histone pre-mRNA.

PubMed ID: 19470752

DOI: 10.1128/mcb.00296-09

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

  • Length: 623
  • Mass: 69633
  • Checksum: 8139FF9E2C8FB304
  • Sequence:
  • MATEHVNGNG TEEPMDTTSA VIHSENFQTL LDAGLPQKVA EKLDEIYVAG LVAHSDLDER 
    AIEALKEFNE DGALAVLQQF KDSDLSHVQN KSAFLCGVMK TYRQREKQGT KVADSSKGPD 
    EAKIKALLER TGYTLDVTTG QRKYGGPPPD SVYSGQQPSV GTEIFVGKIP RDLFEDELVP 
    LFEKAGPIWD LRLMMDPLTG LNRGYAFVTF CTKEAAQEAV KLYNNHEIRS GKHIGVCISV 
    ANNRLFVGSI PKSKTKEQIL EEFSKVTEGL TDVILYHQPD DKKKNRGFCF LEYEDHKTAA 
    QARRRLMSGK VKVWGNVGTV EWADPIEDPD PEVMAKVKVL FVRNLANTVT EEILEKSFSQ 
    FGKLERVKKL KDYAFIHFDE RDGAVKAMEE MNGKDLEGEN IEIVFAKPPD QKRKERKAQR 
    QAAKNQMYDD YYYYGPPHMP PPTRGRGRGG RGGYGYPPDY YGYEDYYDYY GYDYHNYRGG 
    YEDPYYGYED FQVGARGRGG RGARGAAPSR GRGAAPPRGR AGYSQRGGPG SARGVRGARG 
    GAQQQRGRGV RGARGGRGGN VGGKRKADGY NQPDTKRRQT NNQNWGSQPI AQQPLQGGDH 
    SGNYGYKSEN QEFYQDTFGQ QWK

Genular Protein ID: 3791634820

Symbol: A0A0R4J259_MOUSE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

  • Length: 561
  • Mass: 62544
  • Checksum: C0259C340146D16A
  • Sequence:
  • MATEHVNGNG TEEPMDTTSA VIHSENFQTL LDAGLPQKVA EKLDEIYVAG LVAHSDLDER 
    AIEALKEFNE DGALAVLQQF KDSDLSHVQN KSAFLCGVMK TYRQREKQGT KVADSSKGPD 
    EAKIKALLER TGYTLDVTTG QRKYGGPPPD SVYSGQQPSV GTEIFVGKIP RDLFEDELVP 
    LFEKAGPIWD LRLMMDPLTG LNRGYAFVTF CTKEAAQEAV KLYNNHEIRS GKHIGVCISV 
    ANNRLFVGSI PKSKTKEQIL EEFSKVTEGL TDVILYHQPD DKKKNRGFCF LEYEDHKTAA 
    QARRRLMSGK VKVWGNVGTV EWADPIEDPD PEVMAKVKVL FVRNLANTVT EEILEKSFSQ 
    FGKLERVKKL KDYAFIHFDE RDGAVKAMEE MNGKDLEGEN IEIVFAKPPD QKRKERKAQR 
    QAAKNQMYDD YYYYGPPHMP PPTRGRGRGG RGGYGYPPDY YGYEDYYDYY GYDYHNYRGG 
    YEDPYYGYED FQVGARGRGG RGARGAAPSR GRGAAPPRGR AGYSQRGGPG SARGVRGARG 
    GAQQQRGRGG KGVEAGPDLL Q

Genular Protein ID: 2465529224

Symbol: G3UZ48_MOUSE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

  • Length: 464
  • Mass: 52063
  • Checksum: F9F0DD8556640AF9
  • Sequence:
  • MKTYRQREKQ GTKVADSSKG PDEAKIKALL ERTGYTLDVT TGQRKYGGPP PDSVYSGQQP 
    SVGTEIFVGK IPRDLFEDEL VPLFEKAGPI WDLRLMMDPL TGLNRGYAFV TFCTKEAAQE 
    AVKLYNNHEI RSGKHIGVCI SVANNRLFVG SIPKSKTKEQ ILEEFSKVTE GLTDVILYHQ 
    PDDKKKNRGF CFLEYEDHKT AAQARRRLMS GKVKVWGNVG TVEWADPIED PDPEVMAKVK 
    VLFVRNLANT VTEEILEKSF SQFGKLERVK KLKDYAFIHF DERDGAVKAM EEMNGKDLEG 
    ENIEIVFAKP PDQKRKERKA QRQAAKNQMY DDYYYYGPPH MPPPTRGRGR GGRGGYGYPP 
    DYYGYEDYYD YYGYDYHNYR GGYEDPYYGY EDFQVGARGR GGRGARGAAP SRGRGAAPPR 
    GRAGYSQRGG PGSARGVRGA RGGAQQQRGR GQGKGVEAGP DLLQ

Genular Protein ID: 1786314017

Symbol: Q3TRV3_MOUSE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 368
  • Mass: 41633
  • Checksum: AA56C3D16FE97A17
  • Sequence:
  • KEQILEEFSK VTEGLTDVIL YHQPDDKKKN RGFCFLEYED HKTAAQARRR LMSGKVKVWG 
    NVGTVEWADP IEDPDPEVMA KVKVLFVRNL ANTVTEEILE KSFSQFGKLE RVKKLKDYAF 
    IHFDERDGAV KAMEEMNGKD LEGENIEIVF AKPPDQKRKE RKAQRQAAKN QMYDDYYYYG 
    PPHMPPPTRG RGRGGRGGYG YPPDYYGYED YYDYYGYDYH NYRGGYEDPY YGYEDFQVGA 
    RGRGGRGARG AAPSRGRGAA PPRGRAGYSQ RGGPGSARGV RGARGGAQQQ RGRGVRGARG 
    GRGGNVGGKR KADGYNQPDT KRRQTNNQNW GSQPIAQQPL QGGDHSGNYG YKSENQEFYQ 
    DTFGQQWK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.