Details for: tbr1b

Gene ID: 58042

Symbol: tbr1b

Ensembl ID: ENSDARG00000004712

Description: T-box brain transcription factor 1b

Associated with

  • Anatomical structure morphogenesis
    (GO:0009653)
  • Cell fate specification
    (GO:0001708)
  • Chromatin
    (GO:0000785)
  • Commitment of neuronal cell to specific neuron type in forebrain
    (GO:0021902)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Embryo development
    (GO:0009790)
  • Epithelium development
    (GO:0060429)
  • Nucleus
    (GO:0005634)
  • Positive regulation of dna-templated transcription
    (GO:0045893)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of neuron projection development
    (GO:0010975)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 786163087

Symbol: B5DE34_DANRE

Name: N/A

UniProtKB Accession Codes:

B5DE34 A0A8N1Z0L4

Database IDs:

ARBA 5 Bgee 1 CTD 1 EMBL 3 Ensembl 2 GO 11 Gene3D 1 HOGENOM 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 PaxDb 1 Pfam 2 Proteomes 2 RefSeq 2 SAM 1 SMART 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 2 eggNOG 1

Citations:

PubMed ID: 12768655

Title: T-box genes and cardiac development.

PubMed ID: 12768655

PubMed ID: 12900450

Title: Unique and combinatorial functions of Fgf3 and Fgf8 during zebrafish forebrain development.

PubMed ID: 12900450

PubMed ID: 16256099

Title: Fgf19 regulated by Hh signaling is required for zebrafish forebrain development.

PubMed ID: 16256099

DOI: 10.1016/j.ydbio.2005.09.042

PubMed ID: 16109975

Title: The zebrafish gene map defines ancestral vertebrate chromosomes.

PubMed ID: 16109975

PubMed ID: 16506201

Title: Expression of pcp4a in subpopulations of CNS neurons in zebrafish.

PubMed ID: 16506201

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 27189481

Title: Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

PubMed ID: 27189481

PubMed ID: 27199671

Title: Afferent Connectivity of the Zebrafish Habenulae.

PubMed ID: 27199671

PubMed ID: 29107546

Title: Life-Long Neurogenic Activity of Individual Neural Stem Cells and Continuous Growth Establish an Outside-In Architecture in the Teleost Pallium.

PubMed ID: 29107546

PubMed ID: 28448525

Title: Brorin is required for neurogenesis, gliogenesis, and commissural axon guidance in the zebrafish forebrain.

PubMed ID: 28448525

PubMed ID: 29695303

Title: Histone H4 acetylation regulates behavioral inter-individual variability in zebrafish.

PubMed ID: 29695303

Sequence Information:

  • Length: 676
  • Mass: 73534
  • Checksum: 40737FA9762D8DD0
  • Sequence:
    • MQLERCISPA LARSKKCMIV GSGYPNAQAS ELALQDYPII SIGDNLERSS PLKKNSAGMT 
NQSEADNFAD SKDSSGDVQR GKLSPDLDGV ADSRHTFDGS AGERYLLSQS SQVQPSPTTM 
FPYPSQHGPT HPAFSIASPS RYMAHHPVIT NGAYNSLLSN SSPQGYATAG YPYAQQYGHA 
YQGTAFYQFS SAQAGLVPGK AQVYLCNRAL WLKFHRHQTE MIITKQGRRM FPFLSFNISG 
LDPTAHYNIF VDVILADPNH WRFQGGKWVP CGKADTNVTG NRVYMHPDSP NTGAHWMRQE 
ISFGKLKLTN NKGATNNTGQ MVVLQSLHKY QPRLHVVQVN EDGTEDTSQP GRVQTFTFPE 
TQFIAVTAYQ NTDITQLKID HNPFAKGFRD NYDTVYTGCD IDRLTPSPGD SPRSQIMPSA 
RYAMTGSFLQ DQFVSSYAKS RFHPGVGGAP GTDRSVPLSN SLLSPQQTEE TTVASPQRWF 
VTPANNRLDF AASAYDAAAA ADFAGNAATL LSYAAAGVKA LPLPGAGCSN RPLGYYGEPP 
GWGTRTPPQY CSKSSSVLSC WPSNSVGSRT TASSYLVPGL EDGDPIAPER SPLGGADESK 
PKDLSESSWI ETPSSIKSID SSDSGIFEQA KRRRISPSAT PVSETSSPLK SEMLTPRECE 
KNCSKDIGYY SFYPHS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.