Details for: hoxc9a

Gene ID: 58043

Symbol: hoxc9a

Ensembl ID: ENSDARG00000092809

Description: homeobox C9a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna-templated transcription
    (GO:0006351)
  • Dna binding
    (GO:0003677)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Negative regulation of vasculogenesis
    (GO:2001213)
  • Nucleus
    (GO:0005634)
  • Positive regulation of lymphangiogenesis
    (GO:1901492)
  • Proximal/distal pattern formation
    (GO:0009954)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2228891182

Symbol: A2BE65_DANRE

Name: N/A

UniProtKB Accession Codes:

A2BE65 A0A8M1P8A4

Database IDs:

ARBA 6 Bgee 1 CDD 1 CTD 1 EMBL 1 Ensembl 3 GO 4 Gene3D 1 HOGENOM 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRNR 1 PIRSF 1 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 2 PhylomeDB 1 Proteomes 2 RefSeq 2 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 TreeFam 1 ZFIN 2

Citations:

PubMed ID: 10415325

Title: Expression patterns of threespine stickleback hox genes and insights into the evolution of the vertebrate body axis.

PubMed ID: 10415325

PubMed ID: 15105502

Title: MicroRNA-directed cleavage of HOXB8 mRNA.

PubMed ID: 15105502

PubMed ID: 15716008

Title: Organization and base composition of tilapia Hox genes: implications for the evolution of Hox clusters in fish.

PubMed ID: 15716008

DOI: 10.1016/j.gene.2004.10.027

PubMed ID: 16109975

Title: The zebrafish gene map defines ancestral vertebrate chromosomes.

PubMed ID: 16109975

PubMed ID: 15797614

Title: Enhancer sequence conservation between vertebrates is favoured in developmental regulator genes.

PubMed ID: 15797614

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 23671670

Title: Dynamic nucleosome organization at hox promoters during zebrafish embryogenesis.

PubMed ID: 23671670

PubMed ID: 24043829

Title: Evidence for at least six Hox clusters in the Japanese lamprey (Lethenteron japonicum).

PubMed ID: 24043829

PubMed ID: 25255084

Title: Nipbl and mediator cooperatively regulate gene expression to control limb development.

PubMed ID: 25255084

PubMed ID: 26335559

Title: Spatiotemporal analysis of zebrafish hox gene regulation by Cdx4.

PubMed ID: 26335559

PubMed ID: 29684203

Title: The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes.

PubMed ID: 29684203

Sequence Information:

  • Length: 270
  • Mass: 30891
  • Checksum: 65A06E9E5B68D39A
  • Sequence:
    • MHVKEKGNIA MSATGPISNY YVDSLINHES EDVLASRFTA TGPISSSSRP TPLVPECADY 
PSCSFAPKPP VFTTSWAPVH SQSSVVYHPY THQPHLGTDS RYVRSWLEPI PGTVSFPGYA 
GNSRHYGLKP DTFQDPRAGD CLGSNGRTYT DYLYCSAVDI REKQQNTPSP ETESLSSGKH 
KDDKAELDPN NPVANWIHAR STRKKRCPYT KYQTLELEKE FLFNMYLTRD RRYEVARVLN 
LTERQVKIWF QNRRMKMKKM NKEKNDSKEQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.