Details for: hoxc1a

Gene ID: 58046

Symbol: hoxc1a

Ensembl ID: ENSDARG00000070337

Description: homeobox C1a

Associated with

  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific dna binding
    (GO:0043565)

Other Information

Genular Protein ID: 2584289963

Symbol: HXC1A_DANRE

Name: Homeobox protein Hox-C1a

UniProtKB Accession Codes:

Q98SH9 A2BE59 Q4PR93 Q9YGS7

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 4 ExpressionAtlas 1 GO 4 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 2 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 11493564

Title: Consequences of Hox gene duplication in the vertebrates: an investigation of the zebrafish Hox paralogue group 1 genes.

PubMed ID: 11493564

DOI: 10.1242/dev.128.13.2471

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 15385162

Title: Differences in expression pattern and function between zebrafish hoxc13 orthologs: recruitment of Hoxc13b into an early embryonic role.

PubMed ID: 15385162

DOI: 10.1016/j.ydbio.2004.07.018

Sequence Information:

  • Length: 302
  • Mass: 34217
  • Checksum: 9A7E6B07B9410E55
  • Sequence:
    • MNSYHGFRDT TSLFIKGYHA TGVMRLHQDH GSTADFPSRE DVNNEADFLQ YHFTNLCATA 
TGACSKPCED PGRANSTRPP FPQNQDFYRP VHPNRPQVPS FQSCREQGLS RKGFSPSSDT 
FRTFSSAHCE LGPVNNTQTE VRTYDGPVRH SAVEDDNTGH GALNTLNETL HSGKTFEWMR 
VRRNQSRAAK IQLGKCSDRE LKTNHGRDSD EDTSSGGSRT NFTTKQLTEL EKEFHFNKYL 
TRARRIEIAN PLQLSETQVK IWFQNRRMKQ KKMLREGLAQ GLMLISGCDE DSKKSDTCSS 
PD

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.