Details for: hoxa9b

Gene ID: 58048

Symbol: hoxa9b

Ensembl ID: ENSDARG00000056819

Description: homeobox A9b

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna-templated transcription
    (GO:0006351)
  • Dna binding
    (GO:0003677)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Nucleus
    (GO:0005634)
  • Proximal/distal pattern formation
    (GO:0009954)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 3967811429

Symbol: HXA9B_DANRE

Name: Homeobox protein Hox-A9b

UniProtKB Accession Codes:

Q9YGT5 Q4PRA6 Q503J9 Q8AWY3

Database IDs:

AlphaFoldDB 1 CDD 1 CTD 1 EMBL 4 GO 9 Gene3D 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIRSF 1 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

Sequence Information:

  • Length: 253
  • Mass: 28795
  • Checksum: 144CD38DB6A77139
  • Sequence:
    • MSTLGTLSYY ADSHIPHEND DHLAPRFSSG PVVQQQSREL TLLEYSEQEP YTFQAKSSIF 
GASWSPVQPT GASIAYHPYI HHPCSTGDSD GASVRPWALE PLPALPFTGL STDTHQDIKL 
EPLVGSGECT THTLLVAETD NNTTQTERKV PDDAVSNGSH DEKIPAETKL DLDPNNPSSN 
WLHAKSTRKK RCPYTKHQTL ELEKEFLFNM YLSRDRRYEV ARLLNLTERQ VKIWFQNRRM 
KMKKCNKDRP KDI

Genular Protein ID: 2745788415

Symbol: F1QQN5_DANRE

Name: N/A

UniProtKB Accession Codes:

F1QQN5 A0A8M2B4A3

Database IDs:

ARBA 6 Bgee 1 CDD 1 CTD 1 EMBL 1 Ensembl 3 GO 4 Gene3D 1 HOGENOM 1 InterPro 6 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRNR 1 PIRSF 1 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 2 PhylomeDB 1 Proteomes 2 RefSeq 2 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 TreeFam 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 253
  • Mass: 28765
  • Checksum: 710D9D5763E9ABE8
  • Sequence:
    • MSTLGTLSYY ADSHIPHEND DHLAPRFSSG PVVQQQSREL TLLEYGEQEP YTFQAKSSIF 
GASWSPVQPT GASIAYHPYI HHPCSTGDSD GASVRPWALE PLPALPFTGL STDTHQDIKL 
EPLVGSGECT THTLLVAETD NNTTQTERKV PDDAVSNGSH DEKIPAETKL DLDPNNPSSN 
WLHAKSTRKK RCPYTKHQTL ELEKEFLFNM YLSRDRRYEV ARLLNLTERQ VKIWFQNRRM 
KMKKCNKDRP KDI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.