Details for: hoxa4a

Gene ID: 58050

Symbol: hoxa4a

Ensembl ID: ENSDARG00000103862

Description: homeobox A4a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Nucleoplasm
    (GO:0005654)
  • Nucleus
    (GO:0005634)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 3202216441

Symbol: HXA4A_DANRE

Name: Homeobox protein Hox-A4a

UniProtKB Accession Codes:

Q9PWL5 O42371 Q05784 Q0P3T8 Q1L970 Q4PRB0

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 6 ExpressionAtlas 1 GO 6 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 TreeFam 1 ZFIN 1

Citations:

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 1681510

Title: A new antennepedia-class gene from the zebrafish.

PubMed ID: 1681510

DOI: 10.1093/nar/19.19.5434

PubMed ID: 9425135

Title: Zebrafish hox genes: expression in the hindbrain region of wild-type and mutants of the segmentation gene, valentino.

PubMed ID: 9425135

DOI: 10.1242/dev.125.3.393

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 245
  • Mass: 28288
  • Checksum: 1AF7F6F0C13B4F10
  • Sequence:
    • MIMSSYLINS NYIEPSFPPC EEYHQNGYMP VSSDYYERPK DPGFPHHEEA SYPRSNYQEQ 
SYDYGNVSTN DLNDFSDRHH AQPQSVSQNH GPRLTTESCV GSDGNKDCSL VSDALPGSQK 
SKEPVVYPWM KKVHVNTVTA SYSGGVPKRS RTAYTRQQAL ELEKEFHFNR YLTRRRRVEI 
AHTMCLSERQ VKIWFQNRRM KWKKDHKLPN TKIRSSSSAP SNHHVKTDAT QQQQTLLPTP 
CSSNL

Genular Protein ID: 3160556510

Symbol: A0A8M9PB41_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A8M9PB41

Database IDs:

ARBA 5 CDD 1 CTD 1 GO 3 Gene3D 1 InterPro 4 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 6 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 126
  • Mass: 14830
  • Checksum: 00E377CBCB35DAA4
  • Sequence:
    • MDWKRTDRIY SGDRGPALVT ASYSGGVPKR SRTAYTRQQA LELEKEFHFN RYLTRRRRVE 
IAHTMCLSER QVKIWFQNRR MKWKKDHKLP NTKIRSSSSA PSNHHVKTDA TQQQQTLLPT 
PCSSNL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.