Details for: hoxa1a

Gene ID: 58051

Symbol: hoxa1a

Ensembl ID: ENSDARG00000104307

Description: homeobox A1a

Associated with

  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific dna binding
    (GO:0043565)

Other Information

Genular Protein ID: 1203713123

Symbol: HXA1A_DANRE

Name: Homeobox protein Hox-A1a

UniProtKB Accession Codes:

Q98SI1 Q1L968 Q4PRB2 Q8AWZ1 Q98SI0 Q9YGT8

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 7 ExpressionAtlas 1 GO 4 Gene3D 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 2 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UniProtKB 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 11493564

Title: Consequences of Hox gene duplication in the vertebrates: an investigation of the zebrafish Hox paralogue group 1 genes.

PubMed ID: 11493564

DOI: 10.1242/dev.128.13.2471

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

Sequence Information:

  • Length: 329
  • Mass: 35737
  • Checksum: CBF2C722F50A85D5
  • Sequence:
    • MSTFLDFSSI SGGGDGGSGG SCSVRAFHGD HGLSTFQSSC AVRLNSCSGD ERFMSNISSQ 
DVINSQPQQA GSYQSPGTLS ITYSAHPSYG TQSFCTGYNH YALNQDVESS VSFPQCGPLV 
YSGNISSTVV QHRHHRHGYS SGNVHLHGQF QYGSATYGNS SDQANLTFVA GCSNPLSPLH 
VPHHDACCSP LSDGVPTGQT FDWMKVKRNP PKTGKAGEYG FGGQPNTVRT NFSTKQLTEL 
EKEFHFNKYL TRARRVEIAA SLQLNETQVK IWFQNRRMKQ KKREKEGLLP KSLSEQKDGL 
EKTEDASEKS PSAPSTPSPS PTVEAYSSN

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.