Details for: hoxb5b

Gene ID: 58052

Symbol: hoxb5b

Ensembl ID: ENSDARG00000054030

Description: homeobox B5b

Associated with

Other Information

Genular Protein ID: 3471068971

Symbol: HXB5B_DANRE

Name: Homeobox protein Hox-B5b

UniProtKB Accession Codes:

P09013 O57359 Q4PR96 Q6DC10 Q8JH53 Q9PWM0

Database IDs:

AlphaFoldDB 1 CDD 1 CTD 1 EMBL 6 GO 9 Gene3D 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 2902580

Title: Primary structure, developmentally regulated expression and potential duplication of the zebrafish homeobox gene ZF-21.

PubMed ID: 2902580

DOI: 10.1093/nar/16.19.9097

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 276
  • Mass: 30912
  • Checksum: 07BD5B28FFEECFE6
  • Sequence:
    • MSSYFLNSFS GRYPNGSDYQ LLNYGTNGAM NASYRDSTSM HSGSFGYNYN GIDLSVNRPN 
NGHFGAVGDN SRAFQNPSQE TRYRQSSCSL SSPDPLSCAT SDTLELKGSS PPSDQSTPTG 
NSRLTNSNNL TSSNSTHFAD TDETNVSSET EEGAQTTTTS HTQKQESVAT STTTPNDGQT 
PQIFPWMRKL HISHDMTGPD GKRARTAYTR YQTLELEKEF HFNRYLTRRR RIEIAHALCL 
SERQIKIWFQ NRRMKWKKDN KLKSMSLATA GSAFQN

Genular Protein ID: 3633890094

Symbol: A0A0R4I9D0_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A0R4I9D0

Database IDs:

ARBA 8 Bgee 1 CDD 1 CTD 1 EMBL 1 Ensembl 3 GO 3 Gene3D 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 4 PROSITE-ProRule 1 Pfam 1 RefSeq 1 RuleBase 2 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 276
  • Mass: 30931
  • Checksum: 57A75B2338E3793D
  • Sequence:
    • MSSYFLNSFS GRYPNGSDYQ LLNYGTNGAM NASYRDSTSM HSGSFGYNYN GIDLSVNRPN 
NGHFGAVGDN SRAFQNPSQE TRYRQSSCSL SSPDPLSCAT SDTLELKGSS PPSDQSTPTG 
NSRLTNSNNL TSSNSTHFAD TDETNVSSET EEGAQTTTTS RTQKQESVAT STTTPNDGQT 
PQIFPWMRKL HISHDMTGPD GKRARTAYTR YQTLELEKEF HFNRYLTRRR RIEIAHALCL 
SERQIKIWFQ NRRMKWKKDN KLKSMSLATA GSAFQN

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.