Details for: hoxa5a

Gene ID: 58055

Symbol: hoxa5a

Ensembl ID: ENSDARG00000102501

Description: homeobox A5a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 722258449

Symbol: HXA5A_DANRE

Name: Homeobox protein Hox-A5a

UniProtKB Accession Codes:

Q9YGT6 Q1L971 Q4PRA9

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 3 GO 5 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

Sequence Information:

  • Length: 265
  • Mass: 29526
  • Checksum: 51E0738377E18CB0
  • Sequence:
    • MSSYFVNSFC GRYPNGVDYP LHNYGDHNSS GQCRDSTGMH SGRYACGYNG MDLSTGHSSP 
GHFLSSGERT QSYKDSPTAT PVRYNQPVTA SSAEPSSDHL PCSSLANSPV SEQSHRALKI 
SLSSTAGSAS KSFGTVLSRE GVSKVSSSME EEKPPGSGQT ASQNVSEAPQ IYPWMRKLHI 
SHDNLAGPEG KRPRTAYTRY QTLELEKEFH FNRYLTRRRR IEIAHTLCLS ERQIKIWFQN 
RRMKWKKDNK LKSMNMAAAG SGYRP

Genular Protein ID: 670025022

Symbol: B3DI27_DANRE

Name: N/A

UniProtKB Accession Codes:

B3DI27

Database IDs:

ARBA 8 AlphaFoldDB 1 CDD 1 CTD 1 EMBL 3 GO 3 Gene3D 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 4 PROSITE-ProRule 1 Pfam 1 RefSeq 1 RuleBase 2 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Sequence Information:

  • Length: 227
  • Mass: 25310
  • Checksum: 608CAFB2A72B8D1F
  • Sequence:
    • MHSGRYACGY NGMDLSTGHS SPGHFLSSGE RTQSYKDSPT ATPVRYNQPV TASSAEPSSD 
HLPCSSLANS PVSEQSHRAL KISLSSTAGS ASKSFGTVLS REGVSKVSSS MEEEKPPGSG 
QTASQNVSEA PQIYPWMRKL HISHDNLAGP EGKRPRTAYT RYQTLELEKE FHFNRYLTRR 
RRIEIAHTLC LSERQIKIWF QNRRMKWKKD NKLKSMNMAA AGSGYRP

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.