Details for: hoxc13b

Gene ID: 58063

Symbol: hoxc13b

Ensembl ID: ENSDARG00000113877

Description: homeobox C13b

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Fin regeneration
    (GO:0031101)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 1134275753

Symbol: A4QP03_DANRE

Name: N/A

UniProtKB Accession Codes:

A4QP03

Database IDs:

ARBA 8 CDD 1 CTD 1 EMBL 2 GO 3 Gene3D 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 Pfam 2 Proteomes 2 RefSeq 2 RuleBase 1 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 15385162

Title: Differences in expression pattern and function between zebrafish hoxc13 orthologs: recruitment of Hoxc13b into an early embryonic role.

PubMed ID: 15385162

DOI: 10.1016/j.ydbio.2004.07.018

PubMed ID: 18202881

Title: The duplication of the Hox gene clusters in teleost fishes.

PubMed ID: 18202881

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142X.2005.05042.x

PubMed ID: 15716008

Title: Organization and base composition of tilapia Hox genes: implications for the evolution of Hox clusters in fish.

PubMed ID: 15716008

DOI: 10.1016/j.gene.2004.10.027

PubMed ID: 16825768

Title: Assignment of zebrafish genetic linkage groups to chromosomes.

PubMed ID: 16825768

PubMed ID: 16472944

Title: Organization and structure of hox gene loci in medaka genome and comparison with those of pufferfish and zebrafish genomes.

PubMed ID: 16472944

DOI: 10.1016/j.gene.2005.11.015

PubMed ID: 17851529

Title: A histone H3 lysine 27 demethylase regulates animal posterior development.

PubMed ID: 17851529

DOI: 10.1038/nature06192

PubMed ID: 19855023

Title: The entire zebrafish blastula-gastrula margin acts as an organizer dependent on the ratio of Nodal to BMP activity.

PubMed ID: 19855023

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 24043829

Title: Evidence for at least six Hox clusters in the Japanese lamprey (Lethenteron japonicum).

PubMed ID: 24043829

PubMed ID: 29684203

Title: The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes.

PubMed ID: 29684203

Sequence Information:

  • Length: 273
  • Mass: 30957
  • Checksum: 7A24440ACC30B633
  • Sequence:
    • MEGLSGNCPA SHCRDFISHP ALGRHSGSLA SHQGTVYPDI TTQDAGRQFP APQASSGTSL 
GYGYAFGSPY YGCRLSYSHN VNLQQKSYHP AEKYMETSGA LPAEELSSRS KEFAIYPSFA 
SSYQTVPGYL DVPVVPGISA HPESRHEALF PMDSYQHWAL SNGWDEQLYC SKEQTHFNHL 
WKSQFSDVVP HQAEMNGYRR GRKKRVPYTK IQLKELEKEY AASKFITKDR RRRISATTSL 
SERQVTIWFQ NRRVKEKKFV CKSSKLSTNM HSV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.