Vapa | ENSRNOG00000014765 | NCBI 58857

Details for: Vapa

Gene ID: 58857

Symbol: Vapa

Ensembl ID: ENSRNOG00000014765

Description: VAMP associated protein A

Associated with

Immune system
(R-RNO-168256)
Innate immune system
(R-RNO-168249)
Insertion of tail-anchored proteins into the endoplasmic reticulum membrane
(R-RNO-9609523)
Neutrophil degranulation
(R-RNO-6798695)
Protein localization
(R-RNO-9609507)
Bicellular tight junction
(GO:0005923)
Ceramide transport
(GO:0035627)
Cholesterol transport
(GO:0030301)
Copii-coated vesicle budding
(GO:0090114)
Endoplasmic reticulum
(GO:0005783)
Endoplasmic reticulum-plasma membrane tethering
(GO:0061817)
Endoplasmic reticulum exit site
(GO:0070971)
Endoplasmic reticulum membrane
(GO:0005789)
Endoplasmic reticulum organization
(GO:0007029)
Endoplasmic reticulum to golgi vesicle-mediated transport
(GO:0006888)
Ffat motif binding
(GO:0033149)
Golgi membrane
(GO:0000139)
Identical protein binding
(GO:0042802)
Membrane
(GO:0016020)
Microtubule binding
(GO:0008017)
Microtubule cytoskeleton
(GO:0015630)
Negative regulation by host of viral genome replication
(GO:0044828)
Neuron projection development
(GO:0031175)
Nuclear membrane
(GO:0031965)
Perinuclear region of cytoplasm
(GO:0048471)
Phospholipid transport
(GO:0015914)
Plasma membrane
(GO:0005886)
Positive regulation by host of viral genome replication
(GO:0044829)
Positive regulation of canonical nf-kappab signal transduction
(GO:0043123)
Protein-containing complex binding
(GO:0044877)
Protein binding
(GO:0005515)
Protein domain specific binding
(GO:0019904)
Protein folding in endoplasmic reticulum
(GO:0034975)
Protein heterodimerization activity
(GO:0046982)
Protein homodimerization activity
(GO:0042803)
Protein localization to endoplasmic reticulum
(GO:0070972)
Sphingomyelin biosynthetic process
(GO:0006686)
Sterol transport
(GO:0015918)
Vesicle
(GO:0031982)
Viral release from host cell
(GO:0019076)

Other Information

Proteins

33 kDa VAMP-associated protein
A0A8I5ZVH7_RAT

Genular Protein ID: 1396192069

Symbol: VAPA_RAT

Name: 33 kDa VAMP-associated protein

UniProtKB Accession Codes:

Q9Z270 Q6P723

Database IDs:

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9920726

Title: Molecular cloning and characterization of mammalian homologues of vesicle-associated membrane protein-associated (VAMP-associated) proteins.

PubMed ID: 9920726

DOI: 10.1006/bbrc.1998.9876

PubMed ID: 19289470

Title: Promotion of neurite extension by protrudin requires its interaction with vesicle-associated membrane protein-associated protein.

PubMed ID: 19289470

DOI: 10.1074/jbc.m807938200

PubMed ID: 22673903

Title: Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues.

PubMed ID: 22673903

DOI: 10.1038/ncomms1871

PubMed ID: 24262037

Title: Arl6IP1 has the ability to shape the mammalian ER membrane in a reticulon-like fashion.

PubMed ID: 24262037

DOI: 10.1042/bj20131186

PubMed ID: 16004875

Title: Structural basis of FFAT motif-mediated ER targeting.

PubMed ID: 16004875

DOI: 10.1016/j.str.2005.04.010

Sequence Information:

Length: 249
Mass: 27841
Checksum: A30D08E31F3379C1
Sequence:

MASASGAMAK HEQILVLDPP SDLKFKGPFT DVVTTNLKLQ NPSDRKVCFK VKTTAPRRYC 
VRPNSGVIDP GSIVTVSVML QPFDYDPNEK SKHKFMVQTI FAPPNISDME AVWKEAKPDE 
LMDSKLRCVF EMPNENDKLN DMEPSKAVPL NASKQDGPLP KPHSVSLNDT ETRKLMEECK 
RLQGEMMKLS EENRHLRDEG LRLRKVAHSD KPGSTSAVSF RDNVTSPLPS LLVVIAAIFI 
GFFLGKFIL

Genular Protein ID: 124249005

Symbol: A0A8I5ZVH7_RAT

Name: N/A

UniProtKB Accession Codes:

A0A8I5ZVH7

Database IDs:

Citations:

PubMed ID: 15057822

Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

PubMed ID: 15057822

DOI: 10.1038/nature02426

Sequence Information:

Length: 290
Mass: 32083
Checksum: 2DA37A7AC9AFA777
Sequence:

MASASGAMAK HEQILVLDPP SDLKFKGPFT DVVTTNLKLQ NPSDRKVCFK VKTTAPRRYC 
VRPNSGVIDP GSIVTVSVML QPFDYDPNEK SKHKFMVQTI FAPPNISDME AVWKEAKPDE 
LMDSKLRCVF EMPNENDKLG KTLPGIASAV TSVSSISSTV ATPASYHMKS DPRELKEVKQ 
NDMEPSKAVP LNASKQDGPL PKPHSVSLND TETRKLMEEC KRLQGEMMKL SEENRHLRDE 
GLRLRKVAHS DKPGSTSAVS FRDNVTSPLP SLLVVIAAIF IGFFLGKFIL

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Vapa

Associated with

Other Information

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Molecular cloning and characterization of mammalian homologues of vesicle-associated membrane protein-associated (VAMP-associated) proteins. PubMed ID: 9920726

Promotion of neurite extension by protrudin requires its interaction with vesicle-associated membrane protein-associated protein. PubMed ID: 19289470

Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues. PubMed ID: 22673903

Arl6IP1 has the ability to shape the mammalian ER membrane in a reticulon-like fashion. PubMed ID: 24262037

Structural basis of FFAT motif-mediated ER targeting. PubMed ID: 16004875

Genome sequence of the Brown Norway rat yields insights into mammalian evolution. PubMed ID: 15057822