Details for: Rcl1

Gene ID: 59028

Symbol: Rcl1

Ensembl ID: ENSMUSG00000024785

Description: RNA terminal phosphate cyclase-like 1

Associated with

  • Major pathway of rrna processing in the nucleolus and cytosol
    (R-MMU-6791226)
  • Metabolism of rna
    (R-MMU-8953854)
  • Rrna processing in the nucleus and cytosol
    (R-MMU-8868773)
  • Catalytic activity
    (GO:0003824)
  • Endonucleolytic cleavage in 5'-ets of tricistronic rrna transcript (ssu-rrna, 5.8s rrna, lsu-rrna)
    (GO:0000480)
  • Endonucleolytic cleavage in its1 to separate ssu-rrna from 5.8s rrna and lsu-rrna from tricistronic rrna transcript (ssu-rrna, 5.8s rrna, lsu-rrna)
    (GO:0000447)
  • Endonucleolytic cleavage of tricistronic rrna transcript (ssu-rrna, 5.8s rrna, lsu-rrna)
    (GO:0000479)
  • Nucleolus
    (GO:0005730)
  • Nucleus
    (GO:0005634)
  • Ribosomal small subunit biogenesis
    (GO:0042274)
  • Ribosome biogenesis
    (GO:0042254)
  • Rna-3'-phosphate cyclase activity
    (GO:0003963)
  • Rna endonuclease activity
    (GO:0004521)
  • Rna processing
    (GO:0006396)
  • Rrna processing
    (GO:0006364)
  • Small-subunit processome
    (GO:0032040)

Other Information

Genular Protein ID: 1220889431

Symbol: RCL1_MOUSE

Name: RNA 3'-terminal phosphate cyclase-like protein

UniProtKB Accession Codes:

Q9JJT0

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 3 EPD 1 Ensembl 1 ExpressionAtlas 1 GO 8 Gene3D 2 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 InterPro 8 KEGG 1 MGI 1 MaxQB 1 NCBI Taxonomy 1 NCBIfam 1 OMA 1 OrthoDB 1 PANTHER 2 PIRSF 1 PRO 1 PROSITE 1 PaxDb 1 PeptideAtlas 1 Pfam 2 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 Pumba 1 RNAct 1 Reactome 1 RefSeq 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 UniProtKB 2 VEuPathDB 1 eggNOG 1 iPTMnet 1

Citations:

PubMed ID: 10790377

Title: Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis.

PubMed ID: 10790377

DOI: 10.1093/emboj/19.9.2115

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 373
  • Mass: 40841
  • Checksum: 3BE97CA47A8CEFA1
  • Sequence:
    • MATQAHSLSY AGCNFLRQRL VLSTLSGRPV KIRRIRARDD NPGLRDFEAS FIRLLDKITN 
GSRIEINQTG TTLYYQPGLL YGGSVEHDCS VLRGIGYYLE ALLCLAPFMK HPLKIVLRGV 
TNDQVDPSVD VLKATALPLL KQFGIDGESF ELKILRRGMP PGGGGEVLFS CPVRKVLKPV 
QLTDPGKIKR IRGMAYSVRV SPQMANRIVD SARSILNKFI PDIYIYTDHM KGVSSGKSPG 
FGLSLVAETT NGTFLSAELA SNPQGQGAAV LPEDLGRNCA KLLLEEIYRG GCVDSTNQSL 
VLLLMTLGQQ DVSKVLLGPL SPYTIEFLRH LKSFFQVMFK VETKPCGEEL KGGDKVLMTC 
VGIGFSNLSK TLK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.