Details for: BCL7A

Gene ID: 605

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: BCL7A

Ensembl ID: ENSG00000110987

Description: BAF chromatin remodeling complex subunit BCL7A

Selected Context(s):  Overall

Cell Significance Landscape

Contexts:

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • pulmonary ionocyte CL0017000
    CSI 13.09
    rCSI 15.93%
    PRS 77.8
  • immature B cell CL0000816
    CSI 9.66
    rCSI 7.18%
    PRS 83.1
  • small pre-B-II cell CL0000954
    CSI 8.42
    rCSI 8.1%
    PRS 88.37
  • large pre-B-II cell CL0000957
    CSI 7.94
    rCSI 22.68%
    PRS 79.57
  • innate lymphoid cell CL0001065
    CSI 7.46
    rCSI 15.41%
    PRS 70.13
  • common dendritic progenitor CL0001029
    CSI 5.87
    rCSI 7.37%
    PRS 80.63
  • neuroblast (sensu Nematoda and Protostomia) CL0000338
    CSI 5.34
    rCSI 6.16%
    PRS 63.01
  • progenitor cell CL0011026
    CSI 4.66
    rCSI 9.91%
    PRS 66.9
  • late pro-B cell CL0002048
    CSI 4.52
    rCSI 11.33%
    PRS 89.07
  • regular atrial cardiac myocyte CL0002129
    CSI 4.22
    rCSI 13.6%
    PRS 68.4
  • mature B cell CL0000785
    CSI 4.06
    rCSI 3.53%
    PRS 81.17
  • glial cell CL0000125
    CSI 3.92
    rCSI 14.91%
    PRS 61.14
  • caudal ganglionic eminence derived cortical interneuron CL4023064
    CSI 3.82
    rCSI 6.74%
    PRS 50.95
  • keratinocyte CL0000312
    CSI 3.49
    rCSI 2.93%
    PRS 74.08
  • hematopoietic precursor cell CL0008001
    CSI 3.32
    rCSI 3.42%
    PRS 85.12
  • renal alpha-intercalated cell CL0005011
    CSI 3.23
    rCSI 4.32%
    PRS 78.68
  • precursor B cell CL0000817
    CSI 3.23
    rCSI 2.83%
    PRS 79.19
  • respiratory basal cell CL0002633
    CSI 3.22
    rCSI 3.33%
    PRS 76.17
  • interneuron CL0000099
    CSI 3.15
    rCSI 6.32%
    PRS 59.94
  • naive B cell CL0000788
    CSI 3.09
    rCSI 2.65%
    PRS 78.02
  • germinal center B cell CL0000844
    CSI 2.91
    rCSI 8.69%
    PRS 84.14
  • ionocyte CL0005006
    CSI 2.86
    rCSI 3.06%
    PRS 71.13
  • B cell CL0000236
    CSI 2.86
    rCSI 3.82%
    PRS 83.38
  • glutamatergic neuron CL0000679
    CSI 2.84
    rCSI 5.83%
    PRS 59.38
  • granulocyte monocyte progenitor cell CL0000557
    CSI 2.82
    rCSI 2.44%
    PRS 75.43
  • pro-B cell CL0000826
    CSI 2.78
    rCSI 2.3%
    PRS 73.12
  • regular ventricular cardiac myocyte CL0002131
    CSI 2.72
    rCSI 16.97%
    PRS 62.06
  • epithelial cell CL0000066
    CSI 2.71
    rCSI 4.16%
    PRS 63.14
  • retinal ganglion cell CL0000740
    CSI 2.7
    rCSI 5.97%
    PRS 56.53
  • intrahepatic cholangiocyte CL0002538
    CSI 2.69
    rCSI 6.45%
    PRS 78.1
  • multi-ciliated epithelial cell CL0005012
    CSI 2.68
    rCSI 2.67%
    PRS 64.14
  • respiratory suprabasal cell CL4033048
    CSI 2.67
    rCSI 3.43%
    PRS 74.94
  • ciliated cell CL0000064
    CSI 2.66
    rCSI 4.32%
    PRS 66.29
  • rod bipolar cell CL0000751
    CSI 2.64
    rCSI 4.75%
    PRS 63.72
  • ON-bipolar cell CL0000749
    CSI 2.64
    rCSI 3.93%
    PRS 71.21
  • class switched memory B cell CL0000972
    CSI 2.62
    rCSI 1.95%
    PRS 85.42
  • pancreatic D cell CL0000173
    CSI 2.6
    rCSI 2.56%
    PRS 73.25
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 2.52
    rCSI 3.57%
    PRS 66.89
  • plasmacytoid dendritic cell, human CL0001058
    CSI 2.48
    rCSI 1.73%
    PRS 73.61
  • early lymphoid progenitor CL0000936
    CSI 2.4
    rCSI 2.11%
    PRS 76.09
  • dopaminergic neuron CL0000700
    CSI 2.38
    rCSI 13.45%
    PRS 56.01
  • OFF-bipolar cell CL0000750
    CSI 2.34
    rCSI 3.2%
    PRS 74.98
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 2.32
    rCSI 2.1%
    PRS 68.01
  • transitional stage B cell CL0000818
    CSI 2.31
    rCSI 7.56%
    PRS 90.62
  • enteroendocrine cell CL0000164
    CSI 2.28
    rCSI 3.12%
    PRS 71.63
  • perivascular cell CL4033054
    CSI 2.27
    rCSI 3.11%
    PRS 76.19
  • neural crest cell CL0011012
    CSI 2.25
    rCSI 1.78%
    PRS 57.9
  • cerebellar granule cell CL0001031
    CSI 2.2
    rCSI 3.24%
    PRS 63.65
  • epithelial cell of lung CL0000082
    CSI 2.18
    rCSI 1.81%
    PRS 70.71
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 2.18
    rCSI 6.44%
    PRS 72.59
  • retina horizontal cell CL0000745
    CSI 2.11
    rCSI 3.21%
    PRS 66.97
  • fraction A pre-pro B cell CL0002045
    CSI 2.1
    rCSI 2.41%
    PRS 85.5
  • stem cell CL0000034
    CSI 2.09
    rCSI 2.02%
    PRS 62.4
  • glioblast CL0000030
    CSI 2.07
    rCSI 3.3%
    PRS 62.34
  • VIP GABAergic cortical interneuron CL4023016
    CSI 2.06
    rCSI 2.46%
    PRS 51.72
  • conjunctival epithelial cell CL1000432
    CSI 2
    rCSI 3.06%
    PRS 71.47
  • lung secretory cell CL1000272
    CSI 1.99
    rCSI 4.92%
    PRS 69.48
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 1.92
    rCSI 1.96%
    PRS 81.94
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 1.91
    rCSI 2.31%
    PRS 79.78
  • radial glial cell CL0000681
    CSI 1.89
    rCSI 2.62%
    PRS 69.03
  • hepatocyte CL0000182
    CSI 1.87
    rCSI 3.36%
    PRS 70.23
  • basal cell of prostate epithelium CL0002341
    CSI 1.87
    rCSI 5.4%
    PRS 79.92
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.85
    rCSI 2.31%
    PRS 49.96
  • hematopoietic stem cell CL0000037
    CSI 1.85
    rCSI 1.23%
    PRS 73.5
  • cerebral cortex neuron CL0010012
    CSI 1.85
    rCSI 7.55%
    PRS 63.55
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.85
    rCSI 4.7%
    PRS 60.29
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 1.8
    rCSI 2.31%
    PRS 67.12
  • neural progenitor cell CL0011020
    CSI 1.78
    rCSI 7.82%
    PRS 59.78
  • lung ciliated cell CL1000271
    CSI 1.77
    rCSI 2.05%
    PRS 61.67
  • common myeloid progenitor CL0000049
    CSI 1.76
    rCSI 1.43%
    PRS 72.59
  • ciliated epithelial cell CL0000067
    CSI 1.75
    rCSI 1.54%
    PRS 58.7
  • GABAergic neuron CL0000617
    CSI 1.71
    rCSI 5.74%
    PRS 55.12
  • bronchus fibroblast of lung CL2000093
    CSI 1.71
    rCSI 1.39%
    PRS 70.82
  • inhibitory interneuron CL0000498
    CSI 1.71
    rCSI 3.95%
    PRS 58.79
  • peripheral nervous system neuron CL2000032
    CSI 1.57
    rCSI 2.14%
    PRS 61.97
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.55
    rCSI 3.48%
    PRS 52.47
  • enteric smooth muscle cell CL0002504
    CSI 1.53
    rCSI 2.19%
    PRS 72.44
  • fallopian tube secretory epithelial cell CL4030006
    CSI 1.53
    rCSI 1.47%
    PRS 70.31
  • epithelial cell of proximal tubule CL0002306
    CSI 1.52
    rCSI 3.72%
    PRS 63.7
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.48
    rCSI 1.9%
    PRS 53.26
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.47
    rCSI 3.23%
    PRS 81.43
  • amacrine cell CL0000561
    CSI 1.45
    rCSI 4.21%
    PRS 59.82
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.44
    rCSI 3.71%
    PRS 65.61
  • vascular associated smooth muscle cell CL0000359
    CSI 1.38
    rCSI 4.47%
    PRS 69.89
  • renal beta-intercalated cell CL0002201
    CSI 1.35
    rCSI 3.22%
    PRS 71.15
  • myeloid dendritic cell CL0000782
    CSI 1.35
    rCSI 1.95%
    PRS 85.46
  • sncg GABAergic cortical interneuron CL4023015
    CSI 1.26
    rCSI 2.03%
    PRS 53.76
  • neural cell CL0002319
    CSI 1.25
    rCSI 4.71%
    PRS 54.51
  • cardiac muscle cell CL0000746
    CSI 1.25
    rCSI 1.79%
    PRS 60.15
  • retinal bipolar neuron CL0000748
    CSI 1.15
    rCSI 2.16%
    PRS 58.4
  • parietal epithelial cell CL1000452
    CSI 1.15
    rCSI 3.07%
    PRS 61.62
  • L6b glutamatergic cortical neuron CL4023038
    CSI 1.14
    rCSI 3.56%
    PRS 53.68
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 1.13
    rCSI 1.9%
    PRS 51.85
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 1.1
    rCSI 2.64%
    PRS 86.29
  • common lymphoid progenitor CL0000051
    CSI 1.04
    rCSI 1.39%
    PRS 88.24
  • retinal cone cell CL0000573
    CSI 0.97
    rCSI 1.56%
    PRS 60.03
  • pancreatic ductal cell CL0002079
    CSI 0.92
    rCSI 1.79%
    PRS 74.09
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.87
    rCSI 2.12%
    PRS 50.28
  • forebrain radial glial cell CL0013000
    CSI 0.87
    rCSI 2.79%
    PRS 74.09
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 0.67
    rCSI 2.6%
    PRS 88.64
  • prostate gland microvascular endothelial cell CL2000059
    CSI 0.2
    rCSI 4.9%
    PRS 83.9%
  • direct pathway medium spiny neuron CL4023026
    CSI 0.2
    rCSI 5.3%
    PRS 50.9%
  • indirect pathway medium spiny neuron CL4023029
    CSI 0.2
    rCSI 5.3%
    PRS 51.5%
  • erythroid progenitor cell CL0000038
    CSI 0.4
    rCSI 2.2%
    PRS 78.3%
  • enteric neuron CL0007011
    CSI 0.4
    rCSI 6.1%
    PRS 81.2%
  • corticothalamic-projecting glutamatergic cortical neuron CL4023013
    CSI 0.4
    rCSI 2.5%
    PRS 53.0%
  • Cajal-Retzius cell CL0000695
    CSI 0.4
    rCSI 3.4%
    PRS 78.8%
  • myeloid lineage restricted progenitor cell CL0000839
    CSI 0.5
    rCSI 2.5%
    PRS 89.1%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 0.5
    rCSI 1.7%
    PRS 50.1%
  • erythroblast CL0000765
    CSI 0.5
    rCSI 1.3%
    PRS 79.7%
  • chandelier pvalb GABAergic cortical interneuron CL4023036
    CSI 0.6
    rCSI 1.7%
    PRS 56.2%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.6
    rCSI 2.2%
    PRS 52.4%
  • central nervous system neuron CL2000029
    CSI 0.6
    rCSI 4.3%
    PRS 57.4%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 0.7
    rCSI 2.6%
    PRS 88.6%
  • forebrain radial glial cell CL0013000
    CSI 0.9
    rCSI 2.8%
    PRS 74.1%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.9
    rCSI 2.1%
    PRS 50.3%
  • pancreatic ductal cell CL0002079
    CSI 0.9
    rCSI 1.8%
    PRS 74.1%
  • retinal cone cell CL0000573
    CSI 1.0
    rCSI 1.6%
    PRS 60.0%
  • common lymphoid progenitor CL0000051
    CSI 1.0
    rCSI 1.4%
    PRS 88.2%
  • hematopoietic multipotent progenitor cell CL0000837
    CSI 1.1
    rCSI 2.6%
    PRS 86.3%
  • lamp5 GABAergic cortical interneuron CL4023011
    CSI 1.1
    rCSI 1.9%
    PRS 51.9%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 1.1
    rCSI 3.6%
    PRS 53.7%
  • parietal epithelial cell CL1000452
    CSI 1.2
    rCSI 3.1%
    PRS 61.6%
  • retinal bipolar neuron CL0000748
    CSI 1.2
    rCSI 2.2%
    PRS 58.4%
  • cardiac muscle cell CL0000746
    CSI 1.3
    rCSI 1.8%
    PRS 60.2%
  • neural cell CL0002319
    CSI 1.3
    rCSI 4.7%
    PRS 54.5%
  • sncg GABAergic cortical interneuron CL4023015
    CSI 1.3
    rCSI 2.0%
    PRS 53.8%
  • myeloid dendritic cell CL0000782
    CSI 1.4
    rCSI 2.0%
    PRS 85.5%
  • renal beta-intercalated cell CL0002201
    CSI 1.4
    rCSI 3.2%
    PRS 71.2%
  • vascular associated smooth muscle cell CL0000359
    CSI 1.4
    rCSI 4.5%
    PRS 69.9%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.4
    rCSI 3.7%
    PRS 65.6%
  • amacrine cell CL0000561
    CSI 1.5
    rCSI 4.2%
    PRS 59.8%
  • enteroendocrine cell of small intestine CL0009006
    CSI 1.5
    rCSI 3.2%
    PRS 81.4%
  • sst GABAergic cortical interneuron CL4023017
    CSI 1.5
    rCSI 1.9%
    PRS 53.3%
  • epithelial cell of proximal tubule CL0002306
    CSI 1.5
    rCSI 3.7%
    PRS 63.7%
  • fallopian tube secretory epithelial cell CL4030006
    CSI 1.5
    rCSI 1.5%
    PRS 70.3%
  • enteric smooth muscle cell CL0002504
    CSI 1.5
    rCSI 2.2%
    PRS 72.4%
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.6
    rCSI 3.5%
    PRS 52.5%
  • peripheral nervous system neuron CL2000032
    CSI 1.6
    rCSI 2.1%
    PRS 62.0%
  • inhibitory interneuron CL0000498
    CSI 1.7
    rCSI 4.0%
    PRS 58.8%
  • bronchus fibroblast of lung CL2000093
    CSI 1.7
    rCSI 1.4%
    PRS 70.8%
  • GABAergic neuron CL0000617
    CSI 1.7
    rCSI 5.7%
    PRS 55.1%
  • ciliated epithelial cell CL0000067
    CSI 1.8
    rCSI 1.5%
    PRS 58.7%
  • common myeloid progenitor CL0000049
    CSI 1.8
    rCSI 1.4%
    PRS 72.6%
  • lung ciliated cell CL1000271
    CSI 1.8
    rCSI 2.1%
    PRS 61.7%
  • neural progenitor cell CL0011020
    CSI 1.8
    rCSI 7.8%
    PRS 59.8%
  • neuroblast (sensu Vertebrata) CL0000031
    CSI 1.8
    rCSI 2.3%
    PRS 67.1%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.9
    rCSI 4.7%
    PRS 60.3%
  • cerebral cortex neuron CL0010012
    CSI 1.9
    rCSI 7.6%
    PRS 63.6%
  • hematopoietic stem cell CL0000037
    CSI 1.9
    rCSI 1.2%
    PRS 73.5%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.9
    rCSI 2.3%
    PRS 50.0%
  • basal cell of prostate epithelium CL0002341
    CSI 1.9
    rCSI 5.4%
    PRS 79.9%
  • hepatocyte CL0000182
    CSI 1.9
    rCSI 3.4%
    PRS 70.2%
  • radial glial cell CL0000681
    CSI 1.9
    rCSI 2.6%
    PRS 69.0%
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 1.9
    rCSI 2.3%
    PRS 79.8%
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 1.9
    rCSI 2.0%
    PRS 81.9%
  • lung secretory cell CL1000272
    CSI 2.0
    rCSI 4.9%
    PRS 69.5%
  • conjunctival epithelial cell CL1000432
    CSI 2.0
    rCSI 3.1%
    PRS 71.5%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 2.1
    rCSI 2.5%
    PRS 51.7%
  • glioblast CL0000030
    CSI 2.1
    rCSI 3.3%
    PRS 62.3%
  • stem cell CL0000034
    CSI 2.1
    rCSI 2.0%
    PRS 62.4%
  • fraction A pre-pro B cell CL0002045
    CSI 2.1
    rCSI 2.4%
    PRS 85.5%
  • retina horizontal cell CL0000745
    CSI 2.1
    rCSI 3.2%
    PRS 67.0%
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 2.2
    rCSI 6.4%
    PRS 72.6%
  • epithelial cell of lung CL0000082
    CSI 2.2
    rCSI 1.8%
    PRS 70.7%
  • cerebellar granule cell CL0001031
    CSI 2.2
    rCSI 3.2%
    PRS 63.7%
  • neural crest cell CL0011012
    CSI 2.3
    rCSI 1.8%
    PRS 57.9%
  • perivascular cell CL4033054
    CSI 2.3
    rCSI 3.1%
    PRS 76.2%
  • enteroendocrine cell CL0000164
    CSI 2.3
    rCSI 3.1%
    PRS 71.6%
  • transitional stage B cell CL0000818
    CSI 2.3
    rCSI 7.6%
    PRS 90.6%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 2.3
    rCSI 2.1%
    PRS 68.0%
  • OFF-bipolar cell CL0000750
    CSI 2.3
    rCSI 3.2%
    PRS 75.0%
  • dopaminergic neuron CL0000700
    CSI 2.4
    rCSI 13.5%
    PRS 56.0%
  • early lymphoid progenitor CL0000936
    CSI 2.4
    rCSI 2.1%
    PRS 76.1%
  • plasmacytoid dendritic cell, human CL0001058
    CSI 2.5
    rCSI 1.7%
    PRS 73.6%
  • kidney loop of Henle thin descending limb epithelial cell CL1001111
    CSI 2.5
    rCSI 3.6%
    PRS 66.9%
  • pancreatic D cell CL0000173
    CSI 2.6
    rCSI 2.6%
    PRS 73.3%
  • class switched memory B cell CL0000972
    CSI 2.6
    rCSI 2.0%
    PRS 85.4%
  • ON-bipolar cell CL0000749
    CSI 2.6
    rCSI 3.9%
    PRS 71.2%
  • rod bipolar cell CL0000751
    CSI 2.6
    rCSI 4.8%
    PRS 63.7%
  • ciliated cell CL0000064
    CSI 2.7
    rCSI 4.3%
    PRS 66.3%
  • respiratory suprabasal cell CL4033048
    CSI 2.7
    rCSI 3.4%
    PRS 74.9%
  • multi-ciliated epithelial cell CL0005012
    CSI 2.7
    rCSI 2.7%
    PRS 64.1%
  • intrahepatic cholangiocyte CL0002538
    CSI 2.7
    rCSI 6.5%
    PRS 78.1%
  • retinal ganglion cell CL0000740
    CSI 2.7
    rCSI 6.0%
    PRS 56.5%
  • epithelial cell CL0000066
    CSI 2.7
    rCSI 4.2%
    PRS 63.1%
  • regular ventricular cardiac myocyte CL0002131
    CSI 2.7
    rCSI 17.0%
    PRS 62.1%
  • pro-B cell CL0000826
    CSI 2.8
    rCSI 2.3%
    PRS 73.1%
  • granulocyte monocyte progenitor cell CL0000557
    CSI 2.8
    rCSI 2.4%
    PRS 75.4%
  • glutamatergic neuron CL0000679
    CSI 2.8
    rCSI 5.8%
    PRS 59.4%
  • B cell CL0000236
    CSI 2.9
    rCSI 3.8%
    PRS 83.4%
  • ionocyte CL0005006
    CSI 2.9
    rCSI 3.1%
    PRS 71.1%
  • germinal center B cell CL0000844
    CSI 2.9
    rCSI 8.7%
    PRS 84.1%
  • naive B cell CL0000788
    CSI 3.1
    rCSI 2.7%
    PRS 78.0%
  • interneuron CL0000099
    CSI 3.2
    rCSI 6.3%
    PRS 59.9%
  • respiratory basal cell CL0002633
    CSI 3.2
    rCSI 3.3%
    PRS 76.2%
  • precursor B cell CL0000817
    CSI 3.2
    rCSI 2.8%
    PRS 79.2%
  • renal alpha-intercalated cell CL0005011
    CSI 3.2
    rCSI 4.3%
    PRS 78.7%
  • hematopoietic precursor cell CL0008001
    CSI 3.3
    rCSI 3.4%
    PRS 85.1%
  • keratinocyte CL0000312
    CSI 3.5
    rCSI 2.9%
    PRS 74.1%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [BCL7A](/details-gene/605) (B-cell CLL/lymphoma 7 protein family member A) is a protein-coding gene located on chromosome 12q24.31. It functions as a core subunit of the BAF (SWI/SNF) chromatin remodeling complex, a key regulator of gene expression and genome architecture. Consistent with this role, [BCL7A](/details-gene/605) is implicated in fundamental cellular processes including [chromatin remodeling](/details-go/GO:0006338), [regulation of transcription](/details-go/GO:0006357), and the control of cell differentiation and proliferation. Its expression profile reveals high significance in diverse progenitor and developing cell types, most notably within the B-cell lineage, such as [immature B cells](/details-cell/CL0000816) and [pre-B cells](/details-cell/CL0000954). The gene was first identified through its involvement in a complex chromosomal translocation in a Burkitt lymphoma cell line ([Link](https://pubmed.ncbi.nlm.nih.gov/8605326)), and its dysregulation is clinically associated with lymphoma ([OMIM: 601406](https://omim.org/entry/601406)), highlighting its importance in both normal hematopoiesis and oncogenesis. ## Cellular Roles and Expression Landscape The expression landscape of [BCL7A](/details-gene/605) points to a critical role in cellular development, differentiation, and specialized function across multiple tissues. **Overall**, the gene shows its highest significance in the [pulmonary ionocyte](/details-cell/CL0017000) (CSI: 13.09), a rare cell type in the lung epithelium responsible for ion transport. This suggests a potentially crucial, yet underexplored, role for BAF-mediated chromatin remodeling in the function or maintenance of these highly specialized cells. More broadly, [BCL7A](/details-gene/605) is a prominent marker of hematopoiesis, particularly B-lymphocyte development. It is highly significant in [immature B cells](/details-cell/CL0000816), [small pre-B-II cells](/details-cell/CL0000954), [large pre-B-II cells](/details-cell/CL0000957), and [late pro-B cells](/details-cell/CL0002048). This expression pattern, extending to [hematopoietic precursor cells](/details-cell/CL0008001) and [common dendritic progenitors](/details-cell/CL0001029), underscores its function in establishing cell fate and identity within the immune system. Its significance is not limited to the immune system, with notable expression in other progenitor populations such as [neuroblasts](/details-cell/CL0000338), and terminally differentiated cells like [regular atrial cardiac myocytes](/details-cell/CL0002129), suggesting a widespread role in maintaining cellular identity through epigenetic regulation. ## Pathways and Molecular Function Functionally, [BCL7A](/details-gene/605) is an integral component of the SWI/SNF-type chromatin remodeling complexes, including the GBAF complex ([GO:0140288](https://www.ebi.ac.uk/QuickGO/term/GO:0140288)). Its molecular activities are central to [epigenetic regulation of gene expression](/details-reactome/R-HSA-212165) and overall [gene expression (transcription)](/details-reactome/R-HSA-74160). The gene's involvement in these pathways explains its pleiotropic effects on cellular behavior. Gene Ontology annotations highlight its role in controlling cell fate decisions through processes like [negative regulation of cell differentiation](/details-go/GO:0045596) and [positive regulation of stem cell population maintenance](/details-go/GO:1902459). Furthermore, [BCL7A](/details-gene/605) is implicated in cell cycle control, specifically the [regulation of the G1/S transition](/details-go/GO:2000045) and the [G0 to G1 transition](/details-go/GO:0070316), which aligns with its role in [positive regulation of cell population proliferation](/details-go/GO:0008284). Its participation in DNA damage response pathways, such as [positive regulation of double-strand break repair](/details-go/GO:2000781), further indicates its importance in maintaining genomic stability, a function consistent with data from large-scale proteomics studies ([Link](https://doi.org/10.1126/science.1140321)). ## Research Directions The expression profile and functional annotations of [BCL7A](/details-gene/605) suggest its dysregulation could be a key event in the pathogenesis of various diseases, particularly cancers of the hematopoietic system. Its high significance in B-cell precursors provides a direct link to its known association with lymphoma. Based on the available data, several testable hypotheses can be proposed: 1. Aberrant [BCL7A](/details-gene/605) expression or function in B-cell progenitors disrupts the normal chromatin landscape, leading to a block in differentiation and promoting the uncontrolled proliferation characteristic of B-cell lymphomas. 2. In [pulmonary ionocytes](/details-cell/CL0017000), [BCL7A](/details-gene/605) is essential for activating or maintaining the expression of key ion channel genes (e.g., CFTR), and its loss of function could contribute to pathologies associated with defective ion transport. 3. Given its role in cell cycle regulation, [BCL7A](/details-gene/605) may act as a context-dependent tumor suppressor or oncogene, with its specific impact on cell proliferation being determined by the epigenetic state and transcriptional network of the host cell. To directly test the first hypothesis regarding its role in B-cell lymphoma, a key experiment could be designed. A conditional knockout of [BCL7A](/details-gene/605) in the murine B-cell lineage (e.g., using a CD19-Cre driver) could be generated. These mice would then be crossed with a lymphoma-prone model (e.g., Eµ-Myc transgenic mice). The development, incidence, and molecular characteristics of lymphomas would be compared between BCL7A-deficient and BCL7A-proficient backgrounds using survival analysis, flow cytometry, and single-cell multi-omics (RNA-seq and ATAC-seq) to dissect the impact on differentiation and chromatin accessibility. From a therapeutic perspective, [BCL7A](/details-gene/605) represents a challenging but potentially valuable target. As a structural component of a large protein complex, it is not amenable to classical small molecule inhibition like an enzyme. However, its crucial role in B-cell malignancies suggests that strategies aimed at disrupting its function could be effective. This might involve developing proteolysis-targeting chimeras (PROTACs) to induce its specific degradation or designing molecules that interfere with its binding to other core BAF complex subunits. Such an inhibition-based strategy would be most relevant for lymphomas where [BCL7A](/details-gene/605) activity contributes to the malignant phenotype.

Genular Protein ID: 1312696442

Symbol: BCL7A_HUMAN

Name: B-cell CLL/lymphoma 7 protein family member A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8605326

Title: Molecular cloning of complex chromosomal translocation t(8;14;12)(q24.1;q32.3;q24.1) in a Burkitt lymphoma cell line defines a new gene (BCL7A) with homology to caldesmon.

PubMed ID: 8605326

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17525332

Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.

PubMed ID: 17525332

DOI: 10.1126/science.1140321

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25218447

Title: Uncovering global SUMOylation signaling networks in a site-specific manner.

PubMed ID: 25218447

DOI: 10.1038/nsmb.2890

Sequence Information:

  • Length: 210
  • Mass: 22810
  • Checksum: 4AB4AC3B309ADDB8
  • Sequence:
  • MSGRSVRAET RSRAKDDIKR VMAAIEKVRK WEKKWVTVGD TSLRIYKWVP VTEPKVDDKN 
    KNKKKGKDEK CGSEVTTPEN SSSPGMMDMH DDNSNQSSIA DASPIKQENS SNSSPAPEPN 
    SAVPSDGTEA KVDEAQADGK EHPGAEDASD EQNSQSSMEH SMNSSEKVDR QPSGDSGLAA 
    ETSAISQDLE GVPPSKKMKL EASQQNSEEM