Details for: HCN2
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 2.6730
Cell Significance Index: -8.2100 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.9776
Cell Significance Index: 14.0000 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.9134
Cell Significance Index: 20.0000 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 0.7459
Cell Significance Index: 6.3400 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.5342
Cell Significance Index: 107.1600 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: 0.4504
Cell Significance Index: 5.4600 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.3764
Cell Significance Index: 260.3500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.3012
Cell Significance Index: 108.0400 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 0.2906
Cell Significance Index: 2.2400 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.2556
Cell Significance Index: 3.1700 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.2380
Cell Significance Index: 15.0000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 0.2258
Cell Significance Index: 6.0500 - Cell Name: hippocampal pyramidal neuron (CL1001571)
Fold Change: 0.2246
Cell Significance Index: 6.4100 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.1628
Cell Significance Index: 7.2000 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.1614
Cell Significance Index: 6.1100 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.1248
Cell Significance Index: 1.0300 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: 0.0830
Cell Significance Index: 5.5800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.0402
Cell Significance Index: 2.1100 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0268
Cell Significance Index: 0.4600 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0155
Cell Significance Index: 3.0800 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.0072
Cell Significance Index: 0.5600 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0005
Cell Significance Index: 0.0900 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: -0.0007
Cell Significance Index: -1.0000 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.0008
Cell Significance Index: -0.0100 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: -0.0013
Cell Significance Index: -1.9300 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: -0.0024
Cell Significance Index: -4.5400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0030
Cell Significance Index: -5.6000 - Cell Name: cell in vitro (CL0001034)
Fold Change: -0.0048
Cell Significance Index: -2.6000 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0091
Cell Significance Index: -4.1300 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0099
Cell Significance Index: -7.2500 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: -0.0101
Cell Significance Index: -6.4400 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0104
Cell Significance Index: -7.6800 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: -0.0113
Cell Significance Index: -7.0600 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0126
Cell Significance Index: -7.1100 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0141
Cell Significance Index: -10.7100 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0172
Cell Significance Index: -7.6100 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: -0.0180
Cell Significance Index: -2.6200 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: -0.0212
Cell Significance Index: -0.4500 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: -0.0213
Cell Significance Index: -0.4600 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0227
Cell Significance Index: -6.5300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0309
Cell Significance Index: -1.9000 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.0363
Cell Significance Index: -0.7800 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: -0.0405
Cell Significance Index: -0.5400 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0429
Cell Significance Index: -7.3200 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0461
Cell Significance Index: -9.7100 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0496
Cell Significance Index: -6.1000 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0513
Cell Significance Index: -7.0400 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: -0.0518
Cell Significance Index: -2.3500 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0530
Cell Significance Index: -6.8000 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0561
Cell Significance Index: -5.7300 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0582
Cell Significance Index: -6.7900 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: -0.0592
Cell Significance Index: -1.1700 - Cell Name: obsolete epithelial cell of alveolus of lung (CL0010003)
Fold Change: -0.0602
Cell Significance Index: -1.5000 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0639
Cell Significance Index: -8.2600 - Cell Name: ON midget ganglion cell (CL4033046)
Fold Change: -0.0666
Cell Significance Index: -0.8400 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.0670
Cell Significance Index: -1.3900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0706
Cell Significance Index: -2.2500 - Cell Name: cortical interneuron (CL0008031)
Fold Change: -0.0726
Cell Significance Index: -1.7400 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: -0.0727
Cell Significance Index: -0.7800 - Cell Name: VIP GABAergic cortical interneuron (CL4023016)
Fold Change: -0.0740
Cell Significance Index: -1.4900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0749
Cell Significance Index: -8.8300 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0812
Cell Significance Index: -9.3000 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0816
Cell Significance Index: -2.2800 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0925
Cell Significance Index: -3.0300 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0927
Cell Significance Index: -9.6500 - Cell Name: neural cell (CL0002319)
Fold Change: -0.0956
Cell Significance Index: -1.1200 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.0991
Cell Significance Index: -7.8500 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: -0.1046
Cell Significance Index: -1.1400 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.1113
Cell Significance Index: -8.3000 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.1117
Cell Significance Index: -7.9000 - Cell Name: neuron (CL0000540)
Fold Change: -0.1192
Cell Significance Index: -1.1300 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.1213
Cell Significance Index: -4.2500 - Cell Name: early pro-B cell (CL0002046)
Fold Change: -0.1250
Cell Significance Index: -8.0700 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.1278
Cell Significance Index: -6.6400 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: -0.1279
Cell Significance Index: -2.6700 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: -0.1343
Cell Significance Index: -3.3500 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: -0.1360
Cell Significance Index: -7.6300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1383
Cell Significance Index: -6.5000 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.1383
Cell Significance Index: -6.4500 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: -0.1466
Cell Significance Index: -1.8500 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.1620
Cell Significance Index: -7.0500 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: -0.1827
Cell Significance Index: -2.1000 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: -0.1841
Cell Significance Index: -6.4700 - Cell Name: melanocyte of skin (CL1000458)
Fold Change: -0.1976
Cell Significance Index: -2.7700 - Cell Name: keratinocyte (CL0000312)
Fold Change: -0.1978
Cell Significance Index: -4.9400 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: -0.2003
Cell Significance Index: -5.7700 - Cell Name: slow muscle cell (CL0000189)
Fold Change: -0.2005
Cell Significance Index: -3.0000 - Cell Name: lens fiber cell (CL0011004)
Fold Change: -0.2068
Cell Significance Index: -6.5400 - Cell Name: stratified epithelial cell (CL0000079)
Fold Change: -0.2103
Cell Significance Index: -7.7200 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: -0.2207
Cell Significance Index: -2.1000 - Cell Name: retinal rod cell (CL0000604)
Fold Change: -0.2227
Cell Significance Index: -2.6600 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: -0.2244
Cell Significance Index: -2.2500 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: -0.2274
Cell Significance Index: -6.5200 - Cell Name: hippocampal interneuron (CL1001569)
Fold Change: -0.2282
Cell Significance Index: -2.9600 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: -0.2322
Cell Significance Index: -4.5700 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: -0.2536
Cell Significance Index: -3.4600 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: -0.2667
Cell Significance Index: -3.1900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2676
Cell Significance Index: -6.6900 - Cell Name: granulosa cell (CL0000501)
Fold Change: -0.2780
Cell Significance Index: -7.3100 - Cell Name: type I muscle cell (CL0002211)
Fold Change: -0.2787
Cell Significance Index: -6.8000
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 1933186398
Symbol: HCN2_HUMAN
Name: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10524219
Title: The human gene coding for HCN2, a pacemaker channel of the heart.
PubMed ID: 10524219
PubMed ID: 10228147
Title: Two pacemaker channels from human heart with profoundly different activation kinetics.
PubMed ID: 10228147
PubMed ID: 15057824
Title: The DNA sequence and biology of human chromosome 19.
PubMed ID: 15057824
DOI: 10.1038/nature02399
PubMed ID: 9630217
Title: Identification of a gene encoding a hyperpolarization-activated 'pacemaker' channel of brain.
PubMed ID: 9630217
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 22006928
Title: Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
PubMed ID: 22006928
PubMed ID: 25197093
Title: Structural basis for the mutual antagonism of cAMP and TRIP8b in regulating HCN channel function.
PubMed ID: 25197093
PubMed ID: 26546007
Title: The hyperpolarization-activated cyclic nucleotide-gated (HCN) channels contain multiple S-palmitoylation sites.
PubMed ID: 26546007
PubMed ID: 22131395
Title: Recessive loss-of-function mutation in the pacemaker HCN2 channel causing increased neuronal excitability in a patient with idiopathic generalized epilepsy.
PubMed ID: 22131395
PubMed ID: 24324597
Title: Novel HCN2 mutation contributes to febrile seizures by shifting the channel's kinetics in a temperature-dependent manner.
PubMed ID: 24324597
PubMed ID: 29064616
Title: Gain-of-function HCN2 variants in genetic epilepsy.
PubMed ID: 29064616
DOI: 10.1002/humu.23357
PubMed ID: 29463886
Title: A set of regulatory genes co-expressed in embryonic human brain is implicated in disrupted speech development.
PubMed ID: 29463886
Sequence Information:
- Length: 889
- Mass: 96950
- Checksum: 4B263E0C06C2A47D
- Sequence:
MDARGGGGRP GESPGATPAP GPPPPPPPAP PQQQPPPPPP PAPPPGPGPA PPQHPPRAEA LPPEAADEGG PRGRLRSRDS SCGRPGTPGA ASTAKGSPNG ECGRGEPQCS PAGPEGPARG PKVSFSCRGA ASGPAPGPGP AEEAGSEEAG PAGEPRGSQA SFMQRQFGAL LQPGVNKFSL RMFGSQKAVE REQERVKSAG AWIIHPYSDF RFYWDFTMLL FMVGNLIIIP VGITFFKDET TAPWIVFNVV SDTFFLMDLV LNFRTGIVIE DNTEIILDPE KIKKKYLRTW FVVDFVSSIP VDYIFLIVEK GIDSEVYKTA RALRIVRFTK ILSLLRLLRL SRLIRYIHQW EEIFHMTYDL ASAVMRICNL ISMMLLLCHW DGCLQFLVPM LQDFPRNCWV SINGMVNHSW SELYSFALFK AMSHMLCIGY GRQAPESMTD IWLTMLSMIV GATCYAMFIG HATALIQSLD SSRRQYQEKY KQVEQYMSFH KLPADFRQKI HDYYEHRYQG KMFDEDSILG ELNGPLREEI VNFNCRKLVA SMPLFANADP NFVTAMLTKL KFEVFQPGDY IIREGTIGKK MYFIQHGVVS VLTKGNKEMK LSDGSYFGEI CLLTRGRRTA SVRADTYCRL YSLSVDNFNE VLEEYPMMRR AFETVAIDRL DRIGKKNSIL LHKVQHDLNS GVFNNQENAI IQEIVKYDRE MVQQAELGQR VGLFPPPPPP PQVTSAIATL QQAAAMSFCP QVARPLVGPL ALGSPRLVRR PPPGPAPAAA SPGPPPPASP PGAPASPRAP RTSPYGGLPA APLAGPALPA RRLSRASRPL SASQPSLPHG APGPAASTRP ASSSTPRLGP TPAARAAAPS PDRRDSASPG AAGGLDPQDS ARSRLSSNL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.