Ddb1 | ENSRNOG00000020715 | NCBI 64470

Details for: Ddb1

Gene ID: 64470

Symbol: Ddb1

Ensembl ID: ENSRNOG00000020715

Description: damage-specific DNA binding protein 1

Associated with

Dna damage bypass
(R-RNO-73893)
Dna damage recognition in gg-ner
(R-RNO-5696394)
Dual incision in gg-ner
(R-RNO-5696400)
Dual incision in tc-ner
(R-RNO-6782135)
Formation of incision complex in gg-ner
(R-RNO-5696395)
Formation of tc-ner pre-incision complex
(R-RNO-6781823)
Gap-filling dna repair synthesis and ligation in tc-ner
(R-RNO-6782210)
Global genome nucleotide excision repair (gg-ner)
(R-RNO-5696399)
Metabolism of proteins
(R-RNO-392499)
Neddylation
(R-RNO-8951664)
Nucleotide excision repair
(R-RNO-5696398)
Post-translational protein modification
(R-RNO-597592)
Recognition of dna damage by pcna-containing replication complex
(R-RNO-110314)
Transcription-coupled nucleotide excision repair (tc-ner)
(R-RNO-6781827)
Apoptotic process
(GO:0006915)
Biological process involved in interaction with symbiont
(GO:0051702)
Cellular response to uv
(GO:0034644)
Cul4-ring e3 ubiquitin ligase complex
(GO:0080008)
Cul4a-ring e3 ubiquitin ligase complex
(GO:0031464)
Cul4b-ring e3 ubiquitin ligase complex
(GO:0031465)
Cullin family protein binding
(GO:0097602)
Cytoplasm
(GO:0005737)
Damaged dna binding
(GO:0003684)
Dna damage response
(GO:0006974)
Dna repair
(GO:0006281)
Ectopic germ cell programmed cell death
(GO:0035234)
Epigenetic programming in the zygotic pronuclei
(GO:0044725)
Negative regulation of apoptotic process
(GO:0043066)
Negative regulation of developmental process
(GO:0051093)
Negative regulation of reproductive process
(GO:2000242)
Nucleic acid binding
(GO:0003676)
Nucleolus
(GO:0005730)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Positive regulation by virus of viral protein levels in host cell
(GO:0046726)
Positive regulation of gluconeogenesis
(GO:0045722)
Positive regulation of protein catabolic process
(GO:0045732)
Positive regulation of viral genome replication
(GO:0045070)
Proteasomal protein catabolic process
(GO:0010498)
Proteasome-mediated ubiquitin-dependent protein catabolic process
(GO:0043161)
Protein-containing complex
(GO:0032991)
Protein-containing complex binding
(GO:0044877)
Protein-macromolecule adaptor activity
(GO:0030674)
Protein ubiquitination
(GO:0016567)
Regulation of circadian rhythm
(GO:0042752)
Regulation of mitotic cell cycle phase transition
(GO:1901990)
Rhythmic process
(GO:0048511)
Site of double-strand break
(GO:0035861)
Spindle assembly involved in female meiosis
(GO:0007056)
Ubiquitin-dependent protein catabolic process
(GO:0006511)
Ubiquitin ligase complex scaffold activity
(GO:0160072)
Uv-damage excision repair
(GO:0070914)
Viral release from host cell
(GO:0019076)
Wd40-repeat domain binding
(GO:0071987)
Wnt signaling pathway
(GO:0016055)

Other Information

Proteins

G3V8T4_RAT

Genular Protein ID: 2867038790

Symbol: G3V8T4_RAT

Name: N/A

UniProtKB Accession Codes:

G3V8T4

Database IDs:

Citations:

PubMed ID: 15057822

Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

PubMed ID: 15057822

DOI: 10.1038/nature02426

PubMed ID: 22673903

Title: Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues.

PubMed ID: 22673903

Sequence Information:

Length: 1140
Mass: 126941
Checksum: 5A8DEDE5B5DE4C64
Sequence:

MSYNYVVTAQ KPTAVNGCVT GHFTSAEDLN LLIAKNTRLE IYVVTAEGLR PVKEVGMYGK 
IAVMELFRPK GESKDLLFIL TAKYNACILE YKQSGESIDI ITRAHGNVQD RIGRPSETGI 
IGIIDPECRM IGLRLYDGLF KVIPLDRDNK ELKAFNIRLE ELHVIDVKFL YGCQAPTICF 
VYQDPQGRHV KTYEVSLREK EFNKGPWKQE NVEAEASMVI AVPEPFGGAI IIGQESITYH 
NGDKYLAIAP PIIKQSTIVC HNRVDPNGSR YLLGDMEGRL FMLLLEKEEQ MDGTVTLKDL 
RVELLGETSI AECLTYLDNG VVFVGSRLGD SQLVKLNVDS NEQGSYVVAM ETFTNLGPIV 
DMCVVDLERQ GQGQLVTCSG AFKEGSLRII RNGIGIHEHA SIDLPGIKGL WPLRSDPSRE 
TDDTLVLSFV GQTRVLMLNG EEVEETELMG FVDDQQTFFC GNVAHQQLIQ ITSASVRLVS 
QEPKALVSEW KEPQGKNISV ASCNSSQVVV AVGRALYYLQ IHPQELRQIS HTEMEHEVAC 
LDITPLGESN GLSPLCAIGL WTDISARILK LPSFELLHKE MLGGEIIPRS ILMTTFESSH 
YLLCALGDGA LFYFGLNIET GLLSDRKKVT LGTQPTVLRT FRSLSTTNVF ACSDRPTVIY 
SSNHKLVFSN VNLKEVNYMC PLNSDGYPDS LALANNSTLT IGTIDEIQKL HIRTVPLYES 
PRKICYQEVS QCFGVLSSRI EVQDTSGGTT ALRPSASTQA LSSSVSSSKL FSSSTAPHET 
SFGEEVEVHN LLIIDQHTFE VLHAHQFLQN EYALSLVSCK LGKDPNTYFI VGTAMVYPEE 
AEPKQGRIVV FQYSDGKLQT VAEKEVKGAV YSMVEFNGKL LASINSTVRL YEWTTEKELR 
TECNHYNNIM ALYLKTKGDF ILVGDLMRSV LLLAYKPMEG NFEEIARDFN PNWMSAVEIL 
DDDNFLGAEN AFNLFVCQKD SAATTDEERQ HLQEVGLFHL GEFVNVFCHG SLVMQNLGET 
STPTQGSVLF GTVNGMIGLV TSLSESWYNL LLDMQNRLNK VIKSVGKIEH SFWRSFHTER 
KTEPATGFID GDLIESFLDI SRPKMQEVVA NLQYDDGSGM KREATADDLI KVVEELTRIH

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.