Details for: six4a

Gene ID: 65233

Symbol: six4a

Ensembl ID: ENSDARG00000004695

Description: SIX homeobox 4a

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Transcription regulator complex
    (GO:0005667)

Other Information

Genular Protein ID: 1074672698

Symbol: A4IG26_DANRE

Name: N/A

UniProtKB Accession Codes:

A4IG26 A0A8M1P6K7

Database IDs:

ARBA 3 Bgee 1 CDD 1 CTD 1 EMBL 3 Ensembl 2 GO 5 Gene3D 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 2 Proteomes 2 RefSeq 2 RuleBase 1 SAM 1 SMART 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 2

Citations:

PubMed ID: 18753786

Title: Divergence of regulatory sequences in duplicated fish genes.

PubMed ID: 18753786

PubMed ID: 19158186

Title: Identification of direct T-box target genes in the developing zebrafish mesoderm.

PubMed ID: 19158186

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 25557621

Title: Sox4 regulates choroid fissure closure by limiting Hedgehog signaling during ocular morphogenesis.

PubMed ID: 25557621

PubMed ID: 26469318

Title: RFX transcription factors are essential for hearing in mice.

PubMed ID: 26469318

PubMed ID: 26034287

Title: Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders.

PubMed ID: 26034287

PubMed ID: 26180064

Title: Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish.

PubMed ID: 26180064

PubMed ID: 25434820

Title: Early depletion of primordial germ cells in zebrafish promotes testis formation.

PubMed ID: 25434820

PubMed ID: 25420467

Title: Time point-based integrative analyses of deep-transcriptome identify four signal pathways in blastemal regeneration of zebrafish lower jaw.

PubMed ID: 25420467

PubMed ID: 27189481

Title: Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

PubMed ID: 27189481

Sequence Information:

  • Length: 593
  • Mass: 64442
  • Checksum: 8F6D0419A2F51551
  • Sequence:
    • MSVSSSEVTV PGDIKKENVK YTELLESSTA NQEHVKLLTL DSPVATGMRV GQQTSPPARK 
MPTMDSLFAH SSPAVTATSL AFSPEQVACV CEALQQGGNV DRLARFLWSL PQSDLLRGNE 
SILRAQALVA FHQARYQELY SILESHSFSP SCHSALQDLW YKARYTEAEK ARGRPLGAVD 
KYRLRRKFPL PRTIWDGEET VYCFKERSRN ALKDLYKQNR YPSPAEKRNL AKITGLSLTQ 
VSNWFKNRRQ RDRNPSETQS KSESDGNHST EDESSKGQES LSPCPMSTCA DGPVSNTALP 
LCSGSLDAGV IVQQVADSRT SISPPSVIFN GVSVHSPASV FHNGTPSFLS STGHVLFSGM 
NLGLQSLACR PTDVEMDGAA QEKGGTADPA LAYSSFHCSV NGTDVEVKEE DLRKDVSVQD 
QAPSIGSAFS ITPSNGLQID SYSLVTEGNK VVLPSLQLTV SSSPSSVTQG VVDCSSPVCQ 
ERLQLTSLEP SSTLYSLGNI HTLSAVKKEP LEPPGGFLYH LGYSSDPTHS SPLLAQTDLP 
TEFRGHTDHM TSSVNGDFLC AVSEGGKGEM EEEEEKQLTK LKTVHLEEEM TDL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.