Details for: Nepn

Gene ID: 66650

Symbol: Nepn

Ensembl ID: ENSMUSG00000038624

Description: nephrocan

Associated with

  • Extracellular matrix
    (GO:0031012)
  • Extracellular matrix organization
    (GO:0030198)
  • Extracellular region
    (GO:0005576)
  • Extracellular space
    (GO:0005615)
  • Interstitial matrix
    (GO:0005614)
  • Lipopolysaccharide binding
    (GO:0001530)
  • Lipopolysaccharide receptor complex
    (GO:0046696)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Negative regulation of transforming growth factor beta receptor signaling pathway
    (GO:0030512)
  • Regulation of cytokine production involved in immune response
    (GO:0002718)
  • Toll-like receptor 4 signaling pathway
    (GO:0034142)

Other Information

Genular Protein ID: 1376931545

Symbol: NEPN_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q9CQ76

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CCDS 1 CTD 1 EMBL 13 Ensembl 1 ExpressionAtlas 1 GO 10 Gene3D 1 GeneTree 1 GlyCosmos 1 GlyGen 1 HOGENOM 1 InParanoid 1 InterPro 4 KEGG 1 MGI 2 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRO 1 PROSITE 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 2 ProteomicsDB 1 RNAct 1 RefSeq 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 16990280

Title: Nephrocan, a novel member of the small leucine-rich repeat protein family, is an inhibitor of transforming growth factor-beta signaling.

PubMed ID: 16990280

DOI: 10.1074/jbc.m604787200

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 19468303

Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.

PubMed ID: 19468303

DOI: 10.1371/journal.pbio.1000112

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 17683524

Title: A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE).

PubMed ID: 17683524

DOI: 10.1186/1471-213x-7-92

Sequence Information:

  • Length: 512
  • Mass: 57705
  • Checksum: BA8F0C4B6F809FAF
  • Sequence:
    • MHPLWAFLLG LSLTNGLSAN CPGRCSCDSM QSVQCYRLME LPSGIPSTTK RLYISHSRIQ 
HLQLSNFTGL LALEDFILLA SGTESIENDT FKTLSTLKTL ELWKNKLRQV PSALPANLEV 
LKLNDNAICA LRGSEFEGLK NLKVLELKNN LISSLSPSML SPLASLQSLM VDGNNIESVV 
GPLSLPHLKY MSMENNQLHL IPGNVFTSLQ NLQFLSFSGN FLTKIPINLP KSLLSLKMER 
NQLKVVRFRD MKHLENLSHL YLSENFLSSI DGAQQLTNLT TLEVSQNQLQ MLPPRLPSRL 
QKLDCSSNFI QRVTAPEFQD LRDLKHLFLD NNVVSLFEAG ALQRCSQLSN LALEQNLLLS 
IPLRLPKTLA RLDLKGNAIQ DMAERELRDL KQLQVLNLRN NRISALDFKA LEGLPRLRHL 
YLDGNPWNCT CSLLRAREVL KAKGTDVKGG QCAAPAERQG ESWMSSKKIL RQCEHHLQQS 
EKSKETKKKP KPEDSSSIRL NMDDDDDDYE ID

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.