Smarcd3 | ENSMUSG00000028949 | NCBI 66993

Details for: Smarcd3

Gene ID: 66993

Symbol: Smarcd3

Ensembl ID: ENSMUSG00000028949

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

Associated with

Cellular responses to stimuli
(R-MMU-8953897)
Cellular responses to stress
(R-MMU-2262752)
Cellular response to chemical stress
(R-MMU-9711123)
Chromatin modifying enzymes
(R-MMU-3247509)
Cytoprotection by hmox1
(R-MMU-9707564)
Gene expression (transcription)
(R-MMU-74160)
Generic transcription pathway
(R-MMU-212436)
Metabolism
(R-MMU-1430728)
Metabolism of lipids
(R-MMU-556833)
Regulation of lipid metabolism by pparalpha
(R-MMU-400206)
Rmts methylate histone arginines
(R-MMU-3214858)
Rna polymerase ii transcription
(R-MMU-73857)
Runx1 interacts with co-factors whose precise effect on runx1 targets is not known
(R-MMU-8939243)
Transcriptional regulation by runx1
(R-MMU-8878171)
Brahma complex
(GO:0035060)
Cardiac right ventricle formation
(GO:0003219)
Chromatin
(GO:0000785)
Chromatin binding
(GO:0003682)
Chromatin organization
(GO:0006325)
Chromatin remodeling
(GO:0006338)
Cytoplasm
(GO:0005737)
Dna-binding transcription factor binding
(GO:0140297)
Heart morphogenesis
(GO:0003007)
Muscle cell differentiation
(GO:0042692)
Nbaf complex
(GO:0071565)
Nervous system development
(GO:0007399)
Neural retina development
(GO:0003407)
Npbaf complex
(GO:0071564)
Nuclear receptor binding
(GO:0016922)
Nuclear receptor coactivator activity
(GO:0030374)
Nucleoplasm
(GO:0005654)
Nucleosome disassembly
(GO:0006337)
Nucleus
(GO:0005634)
Positive regulation of cell differentiation
(GO:0045597)
Positive regulation of dna-templated transcription
(GO:0045893)
Positive regulation of double-strand break repair
(GO:2000781)
Positive regulation of g2/m transition of mitotic cell cycle
(GO:0010971)
Positive regulation of myoblast differentiation
(GO:0045663)
Positive regulation of neuroblast proliferation
(GO:0002052)
Positive regulation of smooth muscle cell differentiation
(GO:0051152)
Positive regulation of t cell differentiation
(GO:0045582)
Protein binding
(GO:0005515)
Regulation of g0 to g1 transition
(GO:0070316)
Regulation of g1/s transition of mitotic cell cycle
(GO:2000045)
Regulation of mitotic metaphase/anaphase transition
(GO:0030071)
Regulation of nucleotide-excision repair
(GO:2000819)
Regulation of protein binding
(GO:0043393)
Regulation of transcription by rna polymerase ii
(GO:0006357)
Secondary heart field specification
(GO:0003139)
Signaling receptor binding
(GO:0005102)
Swi/snf complex
(GO:0016514)
Swi/snf superfamily-type complex
(GO:0070603)
Transcription coregulator activity
(GO:0003712)
Transcription coregulator binding
(GO:0001221)

Other Information

Proteins

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3

Genular Protein ID: 3055892271

Symbol: SMRD3_MOUSE

Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3

UniProtKB Accession Codes:

Q6P9Z1 Q921D3 Q9CX89 Q9DB99

Database IDs:

Citations:

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 14701856

Title: Transcription factors and nuclear receptors interact with the SWI/SNF complex through the BAF60c subunit.

PubMed ID: 14701856

DOI: 10.1074/jbc.m312288200

PubMed ID: 17640523

Title: An essential switch in subunit composition of a chromatin remodeling complex during neural development.

PubMed ID: 17640523

DOI: 10.1016/j.neuron.2007.06.019

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 22952240

Title: SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions.

PubMed ID: 22952240

DOI: 10.1074/jbc.r111.309302

PubMed ID: 26601204

Title: Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics.

PubMed ID: 26601204

DOI: 10.1126/sciadv.1500447

PubMed ID: 29374058

Title: Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes.

PubMed ID: 29374058

DOI: 10.1074/jbc.ra117.001065

Sequence Information:

Length: 483
Mass: 54986
Checksum: 70A1928E8F0A03C0
Sequence:

MAADEVAGGA RKATKSKLFE FLVHGVRPGM PSGARMPHQG APMGPPGSPY MGSPAVRPGL 
APAGMEPARK RAAPPPGQSQ AQGQGQPVPT APARSRSAKR RKMADKILPQ RIRELVPESQ 
AYMDLLAFER KLDQTIMRKR VDIQEALKRP MKQKRKLRLY ISNTFNPAKP DAEDSDGSIA 
SWELRVEGKL LDDPSKQKRK FSSFFKSLVI ELDKDLYGPD NHLVEWHRTP TTQETDGFQV 
KRPGDLSVRC TLLLMLDYQP PQFKLDPRLA RLLGLHTQSR SAIVQALWQY VKTNRLQDSH 
DKEYINGDKY FQQIFDCPRL KFSEIPQRLT ALLLPPDPIV INHVISVDPS DQKKTACYDI 
DVEVEEPLKG QMSSFLLSTA NQQEISALDS KIHETIESIN QLKIQRDFML SFSRDPKGYV 
QDLLRSQSRD LKVMTDVAGN PEEERRAEFY HQPWSQEAVS RYFYCKIQQR RQELEQSLVV 
RNT

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Smarcd3

Associated with

Other Information

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Transcription factors and nuclear receptors interact with the SWI/SNF complex through the BAF60c subunit. PubMed ID: 14701856

An essential switch in subunit composition of a chromatin remodeling complex during neural development. PubMed ID: 17640523

A tissue-specific atlas of mouse protein phosphorylation and expression. PubMed ID: 21183079

SWI/SNF chromatin-remodeling factors: multiscale analyses and diverse functions. PubMed ID: 22952240

Mammalian SWI/SNF chromatin remodeling complexes and cancer: Mechanistic insights gained from human genomics. PubMed ID: 26601204

Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes. PubMed ID: 29374058