Details for: BRCA1
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 74.2549
Cell Significance Index: -11.5500 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 60.0252
Cell Significance Index: -15.2300 - Cell Name: smooth muscle fiber of ileum (CL1000278)
Fold Change: 37.4055
Cell Significance Index: -17.6600 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 36.3071
Cell Significance Index: -14.7500 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 15.3235
Cell Significance Index: -14.6300 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 13.2122
Cell Significance Index: -16.2900 - Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
Fold Change: 6.4953
Cell Significance Index: -17.4000 - Cell Name: stromal cell of bone marrow (CL0010001)
Fold Change: 4.2828
Cell Significance Index: -16.9000 - Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
Fold Change: 4.0404
Cell Significance Index: -12.4100 - Cell Name: epidermal Langerhans cell (CL0002457)
Fold Change: 3.9797
Cell Significance Index: -8.7100 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 2.3590
Cell Significance Index: 468.1600 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 1.5020
Cell Significance Index: 148.5800 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 1.3292
Cell Significance Index: 74.5900 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 1.2762
Cell Significance Index: 21.8700 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.8522
Cell Significance Index: 138.6000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.7804
Cell Significance Index: 84.8800 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 0.7267
Cell Significance Index: 20.3100 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.7138
Cell Significance Index: 42.8500 - Cell Name: germ cell (CL0000586)
Fold Change: 0.7019
Cell Significance Index: 5.3000 - Cell Name: neutrophil progenitor cell (CL0000834)
Fold Change: 0.6262
Cell Significance Index: 16.7500 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: 0.5647
Cell Significance Index: 66.5900 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 0.4950
Cell Significance Index: 31.2000 - Cell Name: preadipocyte (CL0002334)
Fold Change: 0.4801
Cell Significance Index: 9.3700 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.4476
Cell Significance Index: 34.3500 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.4324
Cell Significance Index: 82.2900 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.3849
Cell Significance Index: 55.9500 - Cell Name: pro-T cell (CL0000827)
Fold Change: 0.3094
Cell Significance Index: 7.9100 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.2845
Cell Significance Index: 256.8600 - Cell Name: adipocyte of breast (CL0002617)
Fold Change: 0.2668
Cell Significance Index: 3.3600 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: 0.2276
Cell Significance Index: 26.5200 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.1912
Cell Significance Index: 38.3500 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.1691
Cell Significance Index: 60.6500 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.1681
Cell Significance Index: 91.8200 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: 0.1675
Cell Significance Index: 20.5900 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 0.1627
Cell Significance Index: 1.9400 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.1615
Cell Significance Index: 10.4200 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 0.1296
Cell Significance Index: 3.4600 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 0.1199
Cell Significance Index: 6.2300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.1163
Cell Significance Index: 3.3500 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0992
Cell Significance Index: 17.8800 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: 0.0966
Cell Significance Index: 60.3200 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: 0.0927
Cell Significance Index: 41.0000 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0826
Cell Significance Index: 57.1000 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: 0.0755
Cell Significance Index: 3.3400 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0754
Cell Significance Index: 116.1400 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 0.0671
Cell Significance Index: 123.8100 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: 0.0617
Cell Significance Index: 2.3400 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0506
Cell Significance Index: 68.7500 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0487
Cell Significance Index: 91.7600 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.0307
Cell Significance Index: 2.1200 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 0.0288
Cell Significance Index: 3.9500 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0282
Cell Significance Index: 1.2800 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.0196
Cell Significance Index: 0.6900 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 0.0154
Cell Significance Index: 0.8000 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0101
Cell Significance Index: 6.3900 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 0.0086
Cell Significance Index: 3.9000 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: 0.0009
Cell Significance Index: 0.0300 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: -0.0052
Cell Significance Index: -0.1100 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0105
Cell Significance Index: -7.8100 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0119
Cell Significance Index: -6.7100 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0196
Cell Significance Index: -14.3600 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0224
Cell Significance Index: -16.9500 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0331
Cell Significance Index: -5.6500 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0332
Cell Significance Index: -1.5500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0454
Cell Significance Index: -13.0500 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: -0.0475
Cell Significance Index: -1.0300 - Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
Fold Change: -0.0492
Cell Significance Index: -1.7100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0493
Cell Significance Index: -10.3800 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0527
Cell Significance Index: -6.0400 - Cell Name: odontoblast (CL0000060)
Fold Change: -0.0812
Cell Significance Index: -10.4100 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: -0.0985
Cell Significance Index: -1.6600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.1030
Cell Significance Index: -10.5200 - Cell Name: sebum secreting cell (CL0000317)
Fold Change: -0.1077
Cell Significance Index: -7.6200 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: -0.1087
Cell Significance Index: -1.6100 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.1126
Cell Significance Index: -11.7200 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.1141
Cell Significance Index: -7.6700 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.1207
Cell Significance Index: -15.5900 - Cell Name: pancreatic endocrine cell (CL0008024)
Fold Change: -0.1318
Cell Significance Index: -15.0400 - Cell Name: glioblast (CL0000030)
Fold Change: -0.1330
Cell Significance Index: -0.8400 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: -0.1487
Cell Significance Index: -2.1300 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: -0.1638
Cell Significance Index: -4.2100 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: -0.1810
Cell Significance Index: -3.0300 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.1851
Cell Significance Index: -11.3800 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.1882
Cell Significance Index: -9.8800 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.1917
Cell Significance Index: -9.0100 - Cell Name: fallopian tube secretory epithelial cell (CL4030006)
Fold Change: -0.1933
Cell Significance Index: -2.9900 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.2024
Cell Significance Index: -5.0600 - Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
Fold Change: -0.2059
Cell Significance Index: -16.3100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.2080
Cell Significance Index: -15.5000 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: -0.2243
Cell Significance Index: -6.0100 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: -0.2298
Cell Significance Index: -3.3000 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: -0.2469
Cell Significance Index: -3.7200 - Cell Name: epithelial cell of uterus (CL0002149)
Fold Change: -0.2476
Cell Significance Index: -3.4400 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.2553
Cell Significance Index: -15.6500 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: -0.2757
Cell Significance Index: -5.7200 - Cell Name: periportal region hepatocyte (CL0019026)
Fold Change: -0.3042
Cell Significance Index: -4.4900 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.3450
Cell Significance Index: -5.1700 - Cell Name: tuft cell of small intestine (CL0009080)
Fold Change: -0.3539
Cell Significance Index: -3.5700 - Cell Name: OFF midget ganglion cell (CL4033047)
Fold Change: -0.3553
Cell Significance Index: -4.4300 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: -0.3801
Cell Significance Index: -8.1300
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3748258052
Symbol: BRCA1_HUMAN
Name: Breast cancer type 1 susceptibility protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 7545954
Title: A strong candidate for the breast and ovarian cancer susceptibility gene BRCA1.
PubMed ID: 7545954
PubMed ID: 8938427
Title: Complete genomic sequence and analysis of 117 kb of human DNA containing the gene BRCA1.
PubMed ID: 8938427
DOI: 10.1101/gr.6.11.1029
PubMed ID: 9010228
Title: Differential subcellular localization, expression and biological toxicity of BRCA1 and the splice variant BRCA1-delta11b.
PubMed ID: 9010228
PubMed ID: 16625196
Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
PubMed ID: 16625196
DOI: 10.1038/nature04689
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 10851077
Title: Initiation of translation from a downstream in-frame AUG codon on BRCA1 can generate the novel isoform protein DeltaBRCA1(17aa).
PubMed ID: 10851077
PubMed ID: 8972225
Title: Localization of BRCA1 and a splice variant identifies the nuclear localization signal.
PubMed ID: 8972225
DOI: 10.1128/mcb.17.1.444
PubMed ID: 9662397
Title: BRCA1 protein is linked to the RNA polymerase II holoenzyme complex via RNA helicase A.
PubMed ID: 9662397
DOI: 10.1038/930
PubMed ID: 9528852
Title: BAP1: a novel ubiquitin hydrolase which binds to the BRCA1 RING finger and enhances BRCA1-mediated cell growth suppression.
PubMed ID: 9528852
PubMed ID: 9811458
Title: Characterization of a carboxy-terminal BRCA1 interacting protein.
PubMed ID: 9811458
PubMed ID: 10500182
Title: RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination.
PubMed ID: 10500182
PubMed ID: 10783165
Title: BASC, a super complex of BRCA1-associated proteins involved in the recognition and repair of aberrant DNA structures.
PubMed ID: 10783165
PubMed ID: 11114888
Title: Functional interactions between BRCA1 and the checkpoint kinase ATR during genotoxic stress.
PubMed ID: 11114888
DOI: 10.1101/gad.851000
PubMed ID: 10724175
Title: hCds1-mediated phosphorylation of BRCA1 regulates the DNA damage response.
PubMed ID: 10724175
DOI: 10.1038/35004614
PubMed ID: 11301010
Title: BACH1, a novel helicase-like protein, interacts directly with BRCA1 and contributes to its DNA repair function.
PubMed ID: 11301010
PubMed ID: 11739404
Title: BRCA1-induced large-scale chromatin unfolding and allele-specific effects of cancer-predisposing mutations.
PubMed ID: 11739404
PubMed ID: 11239454
Title: Interaction of the Fanconi anemia proteins and BRCA1 in a common pathway.
PubMed ID: 11239454
PubMed ID: 12183412
Title: Phosphorylation of serine 1387 in BRCA1 is specifically required for the Atm-mediated S-phase checkpoint after ionizing irradiation.
PubMed ID: 12183412
PubMed ID: 12419185
Title: NBS1 localizes to gamma-H2AX foci through interaction with the FHA/BRCT domain.
PubMed ID: 12419185
PubMed ID: 11877377
Title: SMC1 is a downstream effector in the ATM/NBS1 branch of the human S-phase checkpoint.
PubMed ID: 11877377
DOI: 10.1101/gad.970702
PubMed ID: 11751867
Title: The LIM domain protein LMO4 interacts with the cofactor CtIP and the tumor suppressor BRCA1 and inhibits BRCA1 activity.
PubMed ID: 11751867
PubMed ID: 11836499
Title: BRCA1 regulates the G2/M checkpoint by activating Chk1 kinase upon DNA damage.
PubMed ID: 11836499
DOI: 10.1038/ng837
PubMed ID: 12360400
Title: BRCA1 interacts with acetyl-CoA carboxylase through its tandem of BRCT domains.
PubMed ID: 12360400
PubMed ID: 12890688
Title: The BRCA1/BARD1 heterodimer assembles polyubiquitin chains through an unconventional linkage involving lysine residue K6 of ubiquitin.
PubMed ID: 12890688
PubMed ID: 12887909
Title: BRCA1-independent ubiquitination of FANCD2.
PubMed ID: 12887909
PubMed ID: 14636569
Title: Regulation of BRCC, a holoenzyme complex containing BRCA1 and BRCA2, by a signalosome-like subunit and its role in DNA repair.
PubMed ID: 14636569
PubMed ID: 14976165
Title: BRCA1:BARD1 induces the formation of conjugated ubiquitin structures, dependent on K6 of ubiquitin, in cells during DNA replication and repair.
PubMed ID: 14976165
DOI: 10.1093/hmg/ddh095
PubMed ID: 14990569
Title: BRCA1 phosphorylation by Aurora-A in the regulation of G2 to M transition.
PubMed ID: 14990569
PubMed ID: 26341884
PubMed ID: 15456891
Title: Artemis is a phosphorylation target of ATM and ATR and is involved in the G2/M DNA damage checkpoint response.
PubMed ID: 15456891
PubMed ID: 15096610
Title: Human claspin works with BRCA1 to both positively and negatively regulate cell proliferation.
PubMed ID: 15096610
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 16818604
Title: BRCA1 ubiquitinates its phosphorylation-dependent binding partner CtIP.
PubMed ID: 16818604
DOI: 10.1101/gad.1431006
PubMed ID: 16326698
Title: BRCA1 affects lipid synthesis through its interaction with acetyl-CoA carboxylase.
PubMed ID: 16326698
PubMed ID: 16698035
Title: ACCA phosphopeptide recognition by the BRCT repeats of BRCA1.
PubMed ID: 16698035
PubMed ID: 18056443
Title: Aurora-A kinase regulates breast cancer associated gene 1 inhibition of centrosome-dependent microtubule nucleation.
PubMed ID: 18056443
PubMed ID: 17643122
Title: CCDC98 is a BRCA1-BRCT domain-binding protein involved in the DNA damage response.
PubMed ID: 17643122
DOI: 10.1038/nsmb1277
PubMed ID: 17643121
PubMed ID: 17525332
Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
PubMed ID: 17525332
PubMed ID: 17525340
Title: Abraxas and RAP80 form a BRCA1 protein complex required for the DNA damage response.
PubMed ID: 17525340
PubMed ID: 18762988
Title: Germline BRCA1 mutations predispose to pancreatic adenocarcinoma.
PubMed ID: 18762988
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 19261748
Title: MERIT40 facilitates BRCA1 localization and DNA damage repair.
PubMed ID: 19261748
DOI: 10.1101/gad.1770609
PubMed ID: 19261749
Title: NBA1, a new player in the Brca1 A complex, is required for DNA damage resistance and checkpoint control.
PubMed ID: 19261749
DOI: 10.1101/gad.1770309
PubMed ID: 19261746
Title: MERIT40 controls BRCA1-Rap80 complex integrity and recruitment to DNA double-strand breaks.
PubMed ID: 19261746
DOI: 10.1101/gad.1739609
PubMed ID: 19369211
Title: PALB2 is an integral component of the BRCA complex required for homologous recombination repair.
PubMed ID: 19369211
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20160719
Title: Identification of DBC1 as a transcriptional repressor for BRCA1.
PubMed ID: 20160719
PubMed ID: 20351172
Title: The UBXN1 protein associates with autoubiquitinated forms of the BRCA1 tumor suppressor and inhibits its enzymatic function.
PubMed ID: 20351172
DOI: 10.1128/mcb.01056-09
PubMed ID: 20364141
Title: The CHK2-BRCA1 tumour suppressor pathway ensures chromosomal stability in human somatic cells.
PubMed ID: 20364141
DOI: 10.1038/ncb2051
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21144835
Title: Protein phosphatase 5 is necessary for ATR-mediated DNA repair.
PubMed ID: 21144835
PubMed ID: 21673012
Title: KIAA0101 interacts with BRCA1 and regulates centrosome number.
PubMed ID: 21673012
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 25218447
Title: Uncovering global SUMOylation signaling networks in a site-specific manner.
PubMed ID: 25218447
DOI: 10.1038/nsmb.2890
PubMed ID: 25755297
Title: System-wide analysis of SUMOylation dynamics in response to replication stress reveals novel small ubiquitin-like modified target proteins and acceptor lysines relevant for genome stability.
PubMed ID: 25755297
PubMed ID: 26807646
Title: EXD2 promotes homologous recombination by facilitating DNA end resection.
PubMed ID: 26807646
DOI: 10.1038/ncb3303
PubMed ID: 28112733
Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.
PubMed ID: 28112733
DOI: 10.1038/nsmb.3366
PubMed ID: 28319063
Title: Compromised BRCA1-PALB2 interaction is associated with breast cancer risk.
PubMed ID: 28319063
DOI: 10.1038/onc.2017.46
PubMed ID: 34552057
Title: ZGRF1 promotes end resection of DNA homologous recombination via forming complex with BRCA1/EXO1.
PubMed ID: 34552057
PubMed ID: 36400755
PubMed ID: 11573085
Title: Structure of a BRCA1-BARD1 heterodimeric RING-RING complex.
PubMed ID: 11573085
DOI: 10.1038/nsb1001-833
PubMed ID: 11573086
Title: Crystal structure of the BRCT repeat region from the breast cancer-associated protein BRCA1.
PubMed ID: 11573086
DOI: 10.1038/nsb1001-838
PubMed ID: 12427738
Title: Structural consequences of a cancer-causing BRCA1-BRCT missense mutation.
PubMed ID: 12427738
PubMed ID: 15609993
Title: Solution structure, backbone dynamics, and association behavior of the C-terminal BRCT domain from the breast cancer-associated protein BRCA1.
PubMed ID: 15609993
DOI: 10.1021/bi049550q
PubMed ID: 15133502
Title: Structure and mechanism of BRCA1 BRCT domain recognition of phosphorylated BACH1 with implications for cancer.
PubMed ID: 15133502
DOI: 10.1038/nsmb775
PubMed ID: 16101277
Title: Structural basis for cell cycle checkpoint control by the BRCA1-CtIP complex.
PubMed ID: 16101277
DOI: 10.1021/bi0509651
PubMed ID: 18452305
Title: Structural evidence for direct interactions between the BRCT domains of human BRCA1 and a phospho-peptide from human ACC1.
PubMed ID: 18452305
DOI: 10.1021/bi800314m
PubMed ID: 18285836
Title: Pathogenicity of the BRCA1 missense variant M1775K is determined by the disruption of the BRCT phosphopeptide-binding pocket: a multi-modal approach.
PubMed ID: 18285836
DOI: 10.1038/ejhg.2008.13
PubMed ID: 20159462
Title: Comparison of the structures and peptide binding specificities of the BRCT domains of MDC1 and BRCA1.
PubMed ID: 20159462
PubMed ID: 21473589
Title: Impact of BRCA1 BRCT domain missense substitutions on phosphopeptide recognition.
PubMed ID: 21473589
DOI: 10.1021/bi2003795
PubMed ID: 24316840
Title: Preliminary crystallographic studies of BRCA1 BRCT-ABRAXAS complex.
PubMed ID: 24316840
PubMed ID: 26778126
Title: Structure of BRCA1-BRCT/Abraxas complex reveals phosphorylation-dependent BRCT dimerization at DNA damage sites.
PubMed ID: 26778126
PubMed ID: 8807330
Title: Mutations and polymorphisms in the familial early-onset breast cancer (BRCA1) gene.
PubMed ID: 8807330
PubMed ID: 7939630
Title: BRCA1 mutations in primary breast and ovarian carcinomas.
PubMed ID: 7939630
PubMed ID: 7894491
Title: Mutations in the BRCA1 gene in families with early-onset breast and ovarian cancer.
PubMed ID: 7894491
DOI: 10.1038/ng1294-387
PubMed ID: 7894493
Title: Confirmation of BRCA1 by analysis of germline mutations linked to breast and ovarian cancer in ten families.
PubMed ID: 7894493
DOI: 10.1038/ng1294-399
PubMed ID: 8554067
Title: A high incidence of BRCA1 mutations in 20 breast-ovarian cancer families.
PubMed ID: 8554067
PubMed ID: 8968716
Title: BRCA1 R841W: a strong candidate for a common mutation with moderate phenotype.
PubMed ID: 8968716
DOI: 10.1002/(sici)1098-2272(1996)13:6<595::aid-gepi5>3.0.co;2-#
PubMed ID: 8776600
Title: Comparison of BRCA1 polymorphisms, rare sequence variants and/or missense mutations in unaffected and breast/ovarian cancer populations.
PubMed ID: 8776600
DOI: 10.1093/hmg/5.6.835
PubMed ID: 8723683
Title: Mutations in the BRCA1 gene in Japanese breast cancer patients.
PubMed ID: 8723683
DOI: 10.1002/(sici)1098-1004(1996)7:4<334::aid-humu7>3.0.co;2-8
PubMed ID: 9760198
Title: A high proportion of mutations in the BRCA1 gene in German breast/ovarian cancer families with clustering of mutations in the 3' third of the gene.
PubMed ID: 9760198
PubMed ID: 9482581
Title: Constant denaturant gel electrophoresis (CDGE) in BRCA1 mutation screening.
PubMed ID: 9482581
DOI: 10.1002/(sici)1098-1004(1998)11:2<166::aid-humu10>3.0.co;2-x
PubMed ID: 9609997
Title: High proportion of missense mutations of the BRCA1 and BRCA2 genes in Japanese breast cancer families.
PubMed ID: 9609997
PubMed ID: 10486320
Title: The contribution of germline BRCA1 and BRCA2 mutations to familial ovarian cancer: no evidence for other ovarian cancer-susceptibility genes.
PubMed ID: 10486320
DOI: 10.1086/302583
PubMed ID: 10323242
Title: Molecular characterization of germline mutations in the BRCA1 and BRCA2 genes from breast cancer families in Taiwan.
PubMed ID: 10323242
PubMed ID: 10196379
Title: Germline BRCA1 alterations in a population-based series of ovarian cancer cases.
PubMed ID: 10196379
DOI: 10.1093/hmg/8.5.889
PubMed ID: 12215251
Title: Characterization of common BRCA1 and BRCA2 variants.
PubMed ID: 12215251
PubMed ID: 12442274
Title: BRCA1 and BRCA2 sequence variants in Chinese breast cancer families.
PubMed ID: 12442274
DOI: 10.1002/humu.9083
PubMed ID: 12442275
Title: BRCA1 and BRCA2 mutation analysis of early-onset and familial breast cancer cases in Mexico.
PubMed ID: 12442275
DOI: 10.1002/humu.9084
PubMed ID: 12938098
Title: Twenty-three novel BRCA1 and BRCA2 sequence alterations in breast and/or ovarian cancer families in Southern Germany.
PubMed ID: 12938098
DOI: 10.1002/humu.9174
PubMed ID: 15026808
Title: BRCA1 and BRCA2 germline mutation spectrum and frequencies in Belgian breast/ovarian cancer families.
PubMed ID: 15026808
PubMed ID: 14746861
Title: One in 10 ovarian cancer patients carry germ line BRCA1 or BRCA2 mutations: results of a prospective study in Southern Sweden.
PubMed ID: 14746861
PubMed ID: 14722926
Title: Novel germline mutations in the BRCA1 and BRCA2 genes in Indian breast and breast-ovarian cancer families.
PubMed ID: 14722926
DOI: 10.1002/humu.9213
PubMed ID: 15365993
Title: BRCA1 and BRCA2 germline mutations in Korean patients with sporadic breast cancer.
PubMed ID: 15365993
DOI: 10.1002/humu.9275
PubMed ID: 16959974
Title: The consensus coding sequences of human breast and colorectal cancers.
PubMed ID: 16959974
PubMed ID: 17924331
Title: A systematic genetic assessment of 1,433 sequence variants of unknown clinical significance in the BRCA1 and BRCA2 breast cancer-predisposition genes.
PubMed ID: 17924331
DOI: 10.1086/521032
PubMed ID: 20513136
Title: Detection of splicing aberrations caused by BRCA1 and BRCA2 sequence variants encoding missense substitutions: implications for prediction of pathogenicity.
PubMed ID: 20513136
DOI: 10.1002/humu.21267
Sequence Information:
- Length: 1863
- Mass: 207721
- Checksum: 89C6D83FF56312AF
- Sequence:
MDLSALRVEE VQNVINAMQK ILECPICLEL IKEPVSTKCD HIFCKFCMLK LLNQKKGPSQ CPLCKNDITK RSLQESTRFS QLVEELLKII CAFQLDTGLE YANSYNFAKK ENNSPEHLKD EVSIIQSMGY RNRAKRLLQS EPENPSLQET SLSVQLSNLG TVRTLRTKQR IQPQKTSVYI ELGSDSSEDT VNKATYCSVG DQELLQITPQ GTRDEISLDS AKKAACEFSE TDVTNTEHHQ PSNNDLNTTE KRAAERHPEK YQGSSVSNLH VEPCGTNTHA SSLQHENSSL LLTKDRMNVE KAEFCNKSKQ PGLARSQHNR WAGSKETCND RRTPSTEKKV DLNADPLCER KEWNKQKLPC SENPRDTEDV PWITLNSSIQ KVNEWFSRSD ELLGSDDSHD GESESNAKVA DVLDVLNEVD EYSGSSEKID LLASDPHEAL ICKSERVHSK SVESNIEDKI FGKTYRKKAS LPNLSHVTEN LIIGAFVTEP QIIQERPLTN KLKRKRRPTS GLHPEDFIKK ADLAVQKTPE MINQGTNQTE QNGQVMNITN SGHENKTKGD SIQNEKNPNP IESLEKESAF KTKAEPISSS ISNMELELNI HNSKAPKKNR LRRKSSTRHI HALELVVSRN LSPPNCTELQ IDSCSSSEEI KKKKYNQMPV RHSRNLQLME GKEPATGAKK SNKPNEQTSK RHDSDTFPEL KLTNAPGSFT KCSNTSELKE FVNPSLPREE KEEKLETVKV SNNAEDPKDL MLSGERVLQT ERSVESSSIS LVPGTDYGTQ ESISLLEVST LGKAKTEPNK CVSQCAAFEN PKGLIHGCSK DNRNDTEGFK YPLGHEVNHS RETSIEMEES ELDAQYLQNT FKVSKRQSFA PFSNPGNAEE ECATFSAHSG SLKKQSPKVT FECEQKEENQ GKNESNIKPV QTVNITAGFP VVGQKDKPVD NAKCSIKGGS RFCLSSQFRG NETGLITPNK HGLLQNPYRI PPLFPIKSFV KTKCKKNLLE ENFEEHSMSP EREMGNENIP STVSTISRNN IRENVFKEAS SSNINEVGSS TNEVGSSINE IGSSDENIQA ELGRNRGPKL NAMLRLGVLQ PEVYKQSLPG SNCKHPEIKK QEYEEVVQTV NTDFSPYLIS DNLEQPMGSS HASQVCSETP DDLLDDGEIK EDTSFAENDI KESSAVFSKS VQKGELSRSP SPFTHTHLAQ GYRRGAKKLE SSEENLSSED EELPCFQHLL FGKVNNIPSQ STRHSTVATE CLSKNTEENL LSLKNSLNDC SNQVILAKAS QEHHLSEETK CSASLFSSQC SELEDLTANT NTQDPFLIGS SKQMRHQSES QGVGLSDKEL VSDDEERGTG LEENNQEEQS MDSNLGEAAS GCESETSVSE DCSGLSSQSD ILTTQQRDTM QHNLIKLQQE MAELEAVLEQ HGSQPSNSYP SIISDSSALE DLRNPEQSTS EKAVLTSQKS SEYPISQNPE GLSADKFEVS ADSSTSKNKE PGVERSSPSK CPSLDDRWYM HSCSGSLQNR NYPSQEELIK VVDVEEQQLE ESGPHDLTET SYLPRQDLEG TPYLESGISL FSDDPESDPS EDRAPESARV GNIPSSTSAL KVPQLKVAES AQSPAAAHTT DTAGYNAMEE SVSREKPELT ASTERVNKRM SMVVSGLTPE EFMLVYKFAR KHHITLTNLI TEETTHVVMK TDAEFVCERT LKYFLGIAGG KWVVSYFWVT QSIKERKMLN EHDFEVRGDV VNGRNHQGPK RARESQDRKI FRGLEICCYG PFTNMPTDQL EWMVQLCGAS VVKELSSFTL GTGVHPIVVV QPDAWTEDNG FHAIGQMCEA PVVTREWVLD SVALYQCQEL DTYLIPQIPH SHY
Genular Protein ID: 3887050088
Symbol: A0A9Y1QQK3_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 37272060
Title: Hybrid-seq deciphers the complex transcriptional profile of the human BRCA1 DNA repair associated gene.
PubMed ID: 37272060
Sequence Information:
- Length: 1816
- Mass: 202342
- Checksum: BC96815F32430DEF
- Sequence:
MLKLLNQKKG PSQCPLCKND ITKRSLQEST RFSQLVEELL KIICAFQLDT GLEYANSYNF AKKENNSPEH LKDEVSIIQS MGYRNRAKRL LQSEPENPSL QETSLSVQLS NLGTVRTLRT KQRIQPQKTS VYIELGSDSS EDTVNKATYC SVGDQELLQI TPQGTRDEIS LDSAKKAACE FSETDVTNTE HHQPSNNDLN TTEKRAAERH PEKYQGSSVS NLHVEPCGTN THASSLQHEN SSLLLTKDRM NVEKAEFCNK SKQPGLARSQ HNRWAGSKET CNDRRTPSTE KKVDLNADPL CERKEWNKQK LPCSENPRDT EDVPWITLNS SIQKVNEWFS RSDELLGSDD SHDGESESNA KVADVLDVLN EVDEYSGSSE KIDLLASDPH EALICKSERV HSKSVESNIE DKIFGKTYRK KASLPNLSHV TENLIIGAFV TEPQIIQERP LTNKLKRKRR PTSGLHPEDF IKKADLAVQK TPEMINQGTN QTEQNGQVMN ITNSGHENKT KGDSIQNEKN PNPIESLEKE SAFKTKAEPI SSSISNMELE LNIHNSKAPK KNRLRRKSST RHIHALELVV SRNLSPPNCT ELQIDSCSSS EEIKKKKYNQ MPVRHSRNLQ LMEGKEPATG AKKSNKPNEQ TSKRHDSDTF PELKLTNAPG SFTKCSNTSE LKEFVNPSLP REEKEEKLET VKVSNNAEDP KDLMLSGERV LQTERSVESS SISLVPGTDY GTQESISLLE VSTLGKAKTE PNKCVSQCAA FENPKGLIHG CSKDNRNDTE GFKYPLGHEV NHSRETSIEM EESELDAQYL QNTFKVSKRQ SFAPFSNPGN AEEECATFSA HSGSLKKQSP KVTFECEQKE ENQGKNESNI KPVQTVNITA GFPVVGQKDK PVDNAKCSIK GGSRFCLSSQ FRGNETGLIT PNKHGLLQNP YRIPPLFPIK SFVKTKCKKN LLEENFEEHS MSPEREMGNE NIPSTVSTIS RNNIRENVFK EASSSNINEV GSSTNEVGSS INEIGSSDEN IQAELGRNRG PKLNAMLRLG VLQPEVYKQS LPGSNCKHPE IKKQEYEEVV QTVNTDFSPY LISDNLEQPM GSSHASQVCS ETPDDLLDDG EIKEDTSFAE NDIKESSAVF SKSVQKGELS RSPSPFTHTH LAQGYRRGAK KLESSEENLS SEDEELPCFQ HLLFGKVNNI PSQSTRHSTV ATECLSKNTE ENLLSLKNSL NDCSNQVILA KASQEHHLSE ETKCSASLFS SQCSELEDLT ANTNTQDPFL IGSSKQMRHQ SESQGVGLSD KELVSDDEER GTGLEENNQE EQSMDSNLGE AASGCESETS VSEDCSGLSS QSDILTTQQR DTMQHNLIKL QQEMAELEAV LEQHGSQPSN SYPSIISDSS ALEDLRNPEQ STSEKAVLTS QKSSEYPISQ NPEGLSADKF EVSADSSTSK NKEPGVERSS PSKCPSLDDR WYMHSCSGSL QNRNYPSQEE LIKVVDVEEQ QLEESGPHDL TETSYLPRQD LEGTPYLESG ISLFSDDPES DPSEDRAPES ARVGNIPSST SALKVPQLKV AESAQSPAAA HTTDTAGYNA MEESVSREKP ELTASTERVN KRMSMVVSGL TPEEFMLVYK FARKHHITLT NLITEETTHV VMKTDAEFVC ERTLKYFLGI AGGKWVVSYF WVTQSIKERK MLNEHDFEVR GDVVNGRNHQ GPKRARESQD RKIFRGLEIC CYGPFTNMPT DQLEWMVQLC GASVVKELSS FTLGTGVHPI VVVQPDAWTE DNGFHAIGQM CEAPVVTREW VLDSVALYQC QELDTYLIPQ IPHSHY
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.