Details for: Ddx39a

Gene ID: 68278

Symbol: Ddx39a

Ensembl ID: ENSMUSG00000005481

Description: DEAD box helicase 39a

Associated with

Other Information

Genular Protein ID: 2799881731

Symbol: DX39A_MOUSE

Name: ATP-dependent RNA helicase DDX39A

UniProtKB Accession Codes:

Q8VDW0 Q3UJV4 Q8C2C2

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 2 CTD 1 ChEBI 6 ChiTaRS 1 DNASU 1 EC 2 EMBL 7 EPD 1 Ensembl 4 ExpressionAtlas 1 GO 10 Gene3D 1 GeneTree 1 Genevisible 1 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 MGI 2 MaxQB 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRO 1 PROSITE 3 PROSITE-ProRule 2 PaxDb 1 PeptideAtlas 1 Pfam 2 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 2 Pumba 1 RNAct 1 Reactome 3 RefSeq 2 Rhea 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 SwissPalm 1 TopDownProteomics 1 TreeFam 1 UCSC 1 UniProtKB 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1

Citations:

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

Sequence Information:

  • Length: 427
  • Mass: 49067
  • Checksum: 4A94699142FCABA8
  • Sequence:
    • MAEQDVENEL LDYDEDEEPQ APQESTPAPP KKDVKGSYVS IHSSGFRDFL LKPELLRAIV 
DCGFEHPSEV QHECIPQAIL GMDVLCQAKS GMGKTAVFVL ATLQQIEPVN GQVSVLVMCH 
TRELAFQISK EYERFSKYMP SVKVSVFFGG LSIKKDEDVL KKNCPHVVVG TPGRILALVR 
SRSLNLRNVK HFVLDECDKM LEQLDMRRDV QEIFRLTPHE KQCMMFSATL SKEIRPVCRK 
FMQDPMEVFV DDETKLTLHG LQQYYVKLKD SEKNRKLFDL LDVLEFNQVV IFVKSVQRCM 
ALAQLLVEQN FPAIAIHRGM AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN 
YDMPEDSDTY LHRVARAGRF GTKGLAVTFV SDENDAKILN DVQDRFEVNV AELPEEIDIS 
TYIEQSR

Genular Protein ID: 2839112779

Symbol: Q3UAF1_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UAF1

Database IDs:

AGR 1 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 Gene3D 1 InterPro 2 MGI 2 MaxQB 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 PeptideAtlas 1 Pfam 1 RefSeq 1 SMART 1 SUPFAM 1

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

  • Length: 227
  • Mass: 26612
  • Checksum: EA5E70AE203A90F1
  • Sequence:
    • MLAANMRRDV QEIFRLTPHE KQCMMFSATL SKEIRPVCRK FMQDPMEVFV DDETKLTLHG 
LQQYYVKLKD SEKNRKLFDL LDVLEFNQVV IFVKSVQRCM ALAQLLVEQN FPAIAIHRGM 
AQEERLSRYQ QFKDFQRRIL VATNLFGRGM DIERVNIVFN YDMPEDSDTY LHRVARAGRF 
GTKGLAVTFV SDENDAKILN DVQDRFEVNV AELPEEIDIS TYIEQSR

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.