Details for: Prdm5

Gene ID: 70779

Symbol: Prdm5

Ensembl ID: ENSMUSG00000029913

Description: PR domain containing 5

Associated with

  • Cellular response to leukemia inhibitory factor
    (GO:1990830)
  • Chromatin organization
    (GO:0006325)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna-binding transcription factor binding
    (GO:0140297)
  • Dna-binding transcription repressor activity, rna polymerase ii-specific
    (GO:0001227)
  • Metal ion binding
    (GO:0046872)
  • Methylation
    (GO:0032259)
  • Methyltransferase activity
    (GO:0008168)
  • Mitotic cell cycle
    (GO:0000278)
  • Negative regulation of dna-templated transcription
    (GO:0045892)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nuclear body
    (GO:0016604)
  • Nucleolus
    (GO:0005730)
  • Nucleoplasm
    (GO:0005654)
  • Nucleus
    (GO:0005634)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of extracellular matrix organization
    (GO:1903053)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific dna binding
    (GO:0043565)
  • Transcription cis-regulatory region binding
    (GO:0000976)

Other Information

Genular Protein ID: 1179273727

Symbol: PRDM5_MOUSE

Name: PR domain zinc finger protein 5

UniProtKB Accession Codes:

Q9CXE0 B2RSK8

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CCDS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EC 1 EMBL 4 Ensembl 1 ExpressionAtlas 1 GO 19 Gene3D 2 GeneTree 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 7 KEGG 1 MGI 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRSF 1 PRO 1 PROSITE 3 PaxDb 1 Pfam 4 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 1 Pumba 1 RNAct 1 RefSeq 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 2

Citations:

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 599
  • Mass: 69550
  • Checksum: 545824C2A54DAAF6
  • Sequence:
    • MLGMYVPDRF ALKSSRVQDG MGLYTARRVR KGEKFGPFAG EKRMPEDLDE NMDYRLMWEV 
RGSKGEVLYI LDATNPRHSN WLRFVHEAPS QERKNLAAIQ EGENIFYLAV DDIETDTELL 
IGYLDSDVEA EEEEQQALTM TKEGKVDHSK GQLAAGSKGH LGCEEDFACP QCESSFPSEE 
VLTEHLQSLH QKPTGEKEFK CENCGKKFPV RQALQRHFEQ HRKACRGEAR FVCKADSCGK 
RLKSKDALRR HQENVHTGDP KRKLICSVCN RKCTSVSSLQ EHRKIHEIFD CQECMKKFIS 
ANQLKRHMIT HSEKRPYNCE ICNKSFKRLD QVGAHKVIHS EDKPYQCKLC GKGFAHRNVY 
KNHKKTHSEE RPFQCDACKA LFRTPFSLQR HLLIHNSERT FKCHHCDATF KRKDTLNVHV 
QVVHERHKKY RCELCNKAFV TPSVLRSHKK THTGEKEKVC PYCGQKFASS GTLRVHIRSH 
TGERPYQCPY CEKGFSKNDG LKMHIRTHTR EKPYQCSECS KAFSQKRGLD EHKRTHTGEK 
PFQCDVCDLA FSLKKMLIRH KMTHNPNRPM AECHFCHKKF TRNDYLKVHM DNIHGVADS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.