Details for: CACNA1F
Associated with
Cells (max top 100)
(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: polychromatophilic erythroblast (CL0000550)
Fold Change: 12.3758
Cell Significance Index: -1.9300 - Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
Fold Change: 6.0321
Cell Significance Index: -1.5300 - Cell Name: mucosal type mast cell (CL0000485)
Fold Change: 4.0369
Cell Significance Index: -1.6400 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 3.8528
Cell Significance Index: 242.8300 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 3.1970
Cell Significance Index: 38.1100 - Cell Name: cone retinal bipolar cell (CL0000752)
Fold Change: 2.7076
Cell Significance Index: 20.8700 - Cell Name: ciliated cell of the bronchus (CL0002332)
Fold Change: 1.6758
Cell Significance Index: -1.6000 - Cell Name: orthochromatic erythroblast (CL0000552)
Fold Change: 1.5653
Cell Significance Index: -1.9300 - Cell Name: retinal bipolar neuron (CL0000748)
Fold Change: 1.1187
Cell Significance Index: 13.5600 - Cell Name: enteroendocrine cell of colon (CL0009042)
Fold Change: 0.8703
Cell Significance Index: 165.6200 - Cell Name: small intestine goblet cell (CL1000495)
Fold Change: 0.7956
Cell Significance Index: 27.9600 - Cell Name: OFF-bipolar cell (CL0000750)
Fold Change: 0.7175
Cell Significance Index: 6.3200 - Cell Name: colon goblet cell (CL0009039)
Fold Change: 0.5917
Cell Significance Index: 58.5300 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.5139
Cell Significance Index: 464.0300 - Cell Name: diffuse bipolar 2 cell (CL4033028)
Fold Change: 0.3175
Cell Significance Index: 3.9000 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.3141
Cell Significance Index: 34.1600 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.3137
Cell Significance Index: 51.0200 - Cell Name: keratocyte (CL0002363)
Fold Change: 0.2395
Cell Significance Index: 3.8000 - Cell Name: medial ganglionic eminence derived interneuron (CL4023063)
Fold Change: 0.2228
Cell Significance Index: 3.1900 - Cell Name: gut absorptive cell (CL0000677)
Fold Change: 0.2089
Cell Significance Index: 12.5400 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 0.1783
Cell Significance Index: 12.3300 - Cell Name: large intestine goblet cell (CL1000320)
Fold Change: 0.1670
Cell Significance Index: 1.8100 - Cell Name: diffuse bipolar 1 cell (CL4033027)
Fold Change: 0.1647
Cell Significance Index: 2.0200 - Cell Name: ON-bipolar cell (CL0000749)
Fold Change: 0.1478
Cell Significance Index: 1.6700 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 0.1292
Cell Significance Index: 2.8300 - Cell Name: enterocyte of epithelium of small intestine (CL1000334)
Fold Change: 0.1225
Cell Significance Index: 3.5300 - Cell Name: transit amplifying cell of small intestine (CL0009012)
Fold Change: 0.1104
Cell Significance Index: 2.2900 - Cell Name: diffuse bipolar 4 cell (CL4033031)
Fold Change: 0.1097
Cell Significance Index: 1.3400 - Cell Name: retinal cone cell (CL0000573)
Fold Change: 0.1017
Cell Significance Index: 1.2700 - Cell Name: erythroid progenitor cell (CL0000038)
Fold Change: 0.0833
Cell Significance Index: 1.0900 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 0.0750
Cell Significance Index: 3.4000 - Cell Name: retinal progenitor cell (CL0002672)
Fold Change: 0.0497
Cell Significance Index: 2.7900 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 0.0480
Cell Significance Index: 9.6200 - Cell Name: myeloid lineage restricted progenitor cell (CL0000839)
Fold Change: 0.0460
Cell Significance Index: 0.6500 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: 0.0349
Cell Significance Index: 0.4000 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.0327
Cell Significance Index: 0.2700 - Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
Fold Change: 0.0277
Cell Significance Index: 0.5900 - Cell Name: early pro-B cell (CL0002046)
Fold Change: 0.0262
Cell Significance Index: 1.6900 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.0252
Cell Significance Index: 17.4200 - Cell Name: Mueller cell (CL0000636)
Fold Change: 0.0149
Cell Significance Index: 0.1200 - Cell Name: paneth cell of epithelium of small intestine (CL1000343)
Fold Change: 0.0138
Cell Significance Index: 0.3000 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.0092
Cell Significance Index: 1.3400 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.0089
Cell Significance Index: 1.7700 - Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 0.0084
Cell Significance Index: 3.0100 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 0.0081
Cell Significance Index: 0.1100 - Cell Name: intermediate cell of urothelium (CL4030055)
Fold Change: 0.0052
Cell Significance Index: 0.9300 - Cell Name: cerebellar granule cell (CL0001031)
Fold Change: 0.0047
Cell Significance Index: 0.0800 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 0.0029
Cell Significance Index: 5.5500 - Cell Name: BEST4+ enteroycte (CL4030026)
Fold Change: 0.0027
Cell Significance Index: 0.0400 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 0.0014
Cell Significance Index: 0.9000 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 0.0014
Cell Significance Index: 2.1600 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.0006
Cell Significance Index: 0.8000 - Cell Name: cell in vitro (CL0001034)
Fold Change: 0.0001
Cell Significance Index: 0.0800 - Cell Name: anterior lens cell (CL0002223)
Fold Change: -0.0001
Cell Significance Index: -0.2300 - Cell Name: pulmonary alveolar epithelial cell (CL0000322)
Fold Change: -0.0022
Cell Significance Index: -1.6400 - Cell Name: hair follicular keratinocyte (CL2000092)
Fold Change: -0.0024
Cell Significance Index: -1.0600 - Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
Fold Change: -0.0025
Cell Significance Index: -1.8600 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: -0.0025
Cell Significance Index: -1.8600 - Cell Name: epithelial cell of stomach (CL0002178)
Fold Change: -0.0030
Cell Significance Index: -0.3500 - Cell Name: type B pancreatic cell (CL0000169)
Fold Change: -0.0032
Cell Significance Index: -1.8100 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: -0.0036
Cell Significance Index: -1.6300 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: -0.0056
Cell Significance Index: -0.9500 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: -0.0070
Cell Significance Index: -2.0100 - Cell Name: intestinal tuft cell (CL0019032)
Fold Change: -0.0082
Cell Significance Index: -0.5000 - Cell Name: basal cell of urothelium (CL1000486)
Fold Change: -0.0086
Cell Significance Index: -1.0600 - Cell Name: abnormal cell (CL0001061)
Fold Change: -0.0090
Cell Significance Index: -0.9200 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: -0.0094
Cell Significance Index: -1.9900 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: -0.0101
Cell Significance Index: -1.1600 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: -0.0105
Cell Significance Index: -0.1500 - Cell Name: lactocyte (CL0002325)
Fold Change: -0.0116
Cell Significance Index: -1.5000 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: -0.0116
Cell Significance Index: -0.6000 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: -0.0126
Cell Significance Index: -0.6600 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: -0.0127
Cell Significance Index: -0.5900 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: -0.0132
Cell Significance Index: -1.8100 - Cell Name: indirect pathway medium spiny neuron (CL4023029)
Fold Change: -0.0133
Cell Significance Index: -0.5900 - Cell Name: transit amplifying cell of colon (CL0009011)
Fold Change: -0.0137
Cell Significance Index: -0.4400 - Cell Name: direct pathway medium spiny neuron (CL4023026)
Fold Change: -0.0156
Cell Significance Index: -0.5900 - Cell Name: tonsil germinal center B cell (CL2000006)
Fold Change: -0.0162
Cell Significance Index: -1.9100 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: -0.0166
Cell Significance Index: -1.2400 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: -0.0167
Cell Significance Index: -0.8700 - Cell Name: flat midget bipolar cell (CL4033033)
Fold Change: -0.0169
Cell Significance Index: -0.2100 - Cell Name: L2/3 intratelencephalic projecting glutamatergic neuron (CL4030059)
Fold Change: -0.0173
Cell Significance Index: -0.2300 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: -0.0177
Cell Significance Index: -0.2700 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: -0.0182
Cell Significance Index: -1.9000 - Cell Name: enteroendocrine cell of small intestine (CL0009006)
Fold Change: -0.0184
Cell Significance Index: -0.4600 - Cell Name: hippocampal granule cell (CL0001033)
Fold Change: -0.0201
Cell Significance Index: -1.3500 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: -0.0202
Cell Significance Index: -0.5500 - Cell Name: forebrain neuroblast (CL1000042)
Fold Change: -0.0205
Cell Significance Index: -1.2600 - Cell Name: L4 intratelencephalic projecting glutamatergic neuron (CL4030063)
Fold Change: -0.0210
Cell Significance Index: -0.2300 - Cell Name: L5 intratelencephalic projecting glutamatergic neuron (CL4030064)
Fold Change: -0.0213
Cell Significance Index: -0.2300 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: -0.0215
Cell Significance Index: -0.6000 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: -0.0225
Cell Significance Index: -1.7300 - Cell Name: invaginating midget bipolar cell (CL4033034)
Fold Change: -0.0267
Cell Significance Index: -0.3300 - Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
Fold Change: -0.0274
Cell Significance Index: -1.2900 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: -0.0276
Cell Significance Index: -0.8800 - Cell Name: hepatoblast (CL0005026)
Fold Change: -0.0285
Cell Significance Index: -0.4800 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: -0.0327
Cell Significance Index: -1.0700 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: -0.0328
Cell Significance Index: -1.1500 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: -0.0355
Cell Significance Index: -0.5400 - Cell Name: eukaryotic cell (CL0000255)
Fold Change: -0.0373
Cell Significance Index: -1.6200
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 3856544691
Symbol: CAC1F_HUMAN
Name: Voltage-gated calcium channel subunit alpha Cav1.4
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9662399
Title: An L-type calcium-channel gene mutated in incomplete X-linked congenital stationary night blindness.
PubMed ID: 9662399
DOI: 10.1038/940
PubMed ID: 9662400
Title: Loss-of-function mutations in a calcium-channel alpha1-subunit gene in Xp11.23 cause incomplete X-linked congenital stationary night blindness.
PubMed ID: 9662400
DOI: 10.1038/947
PubMed ID: 10873387
Title: Isolation and characterization of a calcium channel gene, cacna1f, the murine orthologue of the gene for incomplete X-linked congenital stationary night blindness.
PubMed ID: 10873387
PubMed ID: 19029287
Title: Expression and 1,4-dihydropyridine-binding properties of brain L-type calcium channel isoforms.
PubMed ID: 19029287
PubMed ID: 15772651
PubMed ID: 9344658
Title: Sequence-based exon prediction around the synaptophysin locus reveals a gene-rich area containing novel genes in human proximal Xp.
PubMed ID: 9344658
PubMed ID: 27226626
Title: Characterization of C-terminal Splice Variants of Cav1.4 Ca2+ Channels in Human Retina.
PubMed ID: 27226626
PubMed ID: 11281458
Title: A summary of 20 CACNA1F mutations identified in 36 families with incomplete X-linked congenital stationary night blindness, and characterization of splice variants.
PubMed ID: 11281458
PubMed ID: 12111638
Title: Thirty distinct CACNA1F mutations in 33 families with incomplete type of XLCSNB and Cacna1f expression profiling in mouse retina.
PubMed ID: 12111638
PubMed ID: 12187427
Title: Infantile and childhood retinal blindness: a molecular perspective (The Franceschetti Lecture).
PubMed ID: 12187427
PubMed ID: 15897456
Title: A CACNA1F mutation identified in an X-linked retinal disorder shifts the voltage dependence of Cav1.4 channel activation.
PubMed ID: 15897456
PubMed ID: 16960802
Title: Mutations in CABP4, the gene encoding the Ca2+-binding protein 4, cause autosomal recessive night blindness.
PubMed ID: 16960802
DOI: 10.1086/508067
PubMed ID: 16505158
Title: X linked cone-rod dystrophy, CORDX3, is caused by a mutation in the CACNA1F gene.
PubMed ID: 16505158
PubMed ID: 17525176
Title: A novel CACNA1F gene mutation causes Aland Island eye disease.
PubMed ID: 17525176
DOI: 10.1167/iovs.06-1103
PubMed ID: 22194652
Title: A novel p.Gly603Arg mutation in CACNA1F causes Aland island eye disease and incomplete congenital stationary night blindness phenotypes in a family.
PubMed ID: 22194652
Sequence Information:
- Length: 1977
- Mass: 220678
- Checksum: 354336550C6D8E73
- Sequence:
MSESEGGKDT TPEPSPANGA GPGPEWGLCP GPPAVEGESS GASGLGTPKR RNQHSKHKTV AVASAQRSPR ALFCLTLANP LRRSCISIVE WKPFDILILL TIFANCVALG VYIPFPEDDS NTANHNLEQV EYVFLVIFTV ETVLKIVAYG LVLHPSAYIR NGWNLLDFII VVVGLFSVLL EQGPGRPGDA PHTGGKPGGF DVKALRAFRV LRPLRLVSGV PSLHIVLNSI MKALVPLLHI ALLVLFVIII YAIIGLELFL GRMHKTCYFL GSDMEAEEDP SPCASSGSGR ACTLNQTECR GRWPGPNGGI TNFDNFFFAM LTVFQCVTME GWTDVLYWMQ DAMGYELPWV YFVSLVIFGS FFVLNLVLGV LSGEFSKERE KAKARGDFQK QREKQQMEED LRGYLDWITQ AEELDMEDPS ADDNLGSMAE EGRAGHRPQL AELTNRRRGR LRWFSHSTRS THSTSSHASL PASDTGSMTE TQGDEDEEEG ALASCTRCLN KIMKTRVCRR LRRANRVLRA RCRRAVKSNA CYWAVLLLVF LNTLTIASEH HGQPVWLTQI QEYANKVLLC LFTVEMLLKL YGLGPSAYVS SFFNRFDCFV VCGGILETTL VEVGAMQPLG ISVLRCVRLL RIFKVTRHWA SLSNLVASLL NSMKSIASLL LLLFLFIIIF SLLGMQLFGG KFNFDQTHTK RSTFDTFPQA LLTVFQILTG EDWNVVMYDG IMAYGGPFFP GMLVCIYFII LFICGNYILL NVFLAIAVDN LASGDAGTAK DKGGEKSNEK DLPQENEGLV PGVEKEEEEG ARREGADMEE EEEEEEEEEE EEEEEGAGGV ELLQEVVPKE KVVPIPEGSA FFCLSQTNPL RKGCHTLIHH HVFTNLILVF IILSSVSLAA EDPIRAHSFR NHILGYFDYA FTSIFTVEIL LKMTVFGAFL HRGSFCRSWF NMLDLLVVSV SLISFGIHSS AISVVKILRV LRVLRPLRAI NRAKGLKHVV QCVFVAIRTI GNIMIVTTLL QFMFACIGVQ LFKGKFYTCT DEAKHTPQEC KGSFLVYPDG DVSRPLVRER LWVNSDFNFD NVLSAMMALF TVSTFEGWPA LLYKAIDAYA EDHGPIYNYR VEISVFFIVY IIIIAFFMMN IFVGFVIITF RAQGEQEYQN CELDKNQRQC VEYALKAQPL RRYIPKNPHQ YRVWATVNSA AFEYLMFLLI LLNTVALAMQ HYEQTAPFNY AMDILNMVFT GLFTIEMVLK IIAFKPKHYF TDAWNTFDAL IVVGSIVDIA VTEVNNGGHL GESSEDSSRI SITFFRLFRV MRLVKLLSKG EGIRTLLWTF IKSFQALPYV ALLIAMIFFI YAVIGMQMFG KVALQDGTQI NRNNNFQTFP QAVLLLFRCA TGEAWQEIML ASLPGNRCDP ESDFGPGEEF TCGSNFAIAY FISFFMLCAF LIINLFVAVI MDNFDYLTRD WSILGPHHLD EFKRIWSEYD PGAKGRIKHL DVVALLRRIQ PPLGFGKLCP HRVACKRLVA MNMPLNSDGT VTFNATLFAL VRTSLKIKTE GNLEQANQEL RIVIKKIWKR MKQKLLDEVI PPPDEEEVTV GKFYATFLIQ DYFRKFRRRK EKGLLGNDAA PSTSSALQAG LRSLQDLGPE MRQALTCDTE EEEEEGQEGV EEEDEKDLET NKATMVSQPS ARRGSGISVS LPVGDRLPDS LSFGPSDDDR GTPTSSQPSV PQAGSNTHRR GSGALIFTIP EEGNSQPKGT KGQNKQDEDE EVPDRLSYLD EQAGTPPCSV LLPPHRAQRY MDGHLVPRRR LLPPTPAGRK PSFTIQCLQR QGSCEDLPIP GTYHRGRNSG PNRAQGSWAT PPQRGRLLYA PLLLVEEGAA GEGYLGRSSG PLRTFTCLHV PGTHSDPSHG KRGSADSLVE AVLISEGLGL FARDPRFVAL AKQEIADACR LTLDEMDNAA SDLLAQGTSS LYSDEESILS RFDEEDLGDE MACVHAL
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.