Details for: CCNH

Gene ID: 902

Symbol: CCNH

Ensembl ID: ENSG00000134480

Description: cyclin H

Associated with

Cells (max top 100)

(Cell Significance Index and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: polychromatophilic erythroblast (CL0000550)
    Fold Change: 475.1030
    Cell Significance Index: -73.9000
  • Cell Name: hematopoietic oligopotent progenitor cell (CL0002032)
    Fold Change: 272.0355
    Cell Significance Index: -69.0000
  • Cell Name: mucosal type mast cell (CL0000485)
    Fold Change: 170.6309
    Cell Significance Index: -69.3200
  • Cell Name: smooth muscle fiber of ileum (CL1000278)
    Fold Change: 168.5155
    Cell Significance Index: -79.5600
  • Cell Name: peripheral blood mononuclear cell (CL2000001)
    Fold Change: 147.5548
    Cell Significance Index: -75.9000
  • Cell Name: ileal goblet cell (CL1000326)
    Fold Change: 118.7442
    Cell Significance Index: -79.6800
  • Cell Name: ciliated cell of the bronchus (CL0002332)
    Fold Change: 72.8625
    Cell Significance Index: -69.5700
  • Cell Name: orthochromatic erythroblast (CL0000552)
    Fold Change: 62.8530
    Cell Significance Index: -77.5000
  • Cell Name: CD8-alpha-beta-positive, alpha-beta intraepithelial T cell (CL0000796)
    Fold Change: 26.0671
    Cell Significance Index: -69.8300
  • Cell Name: CD8-positive, alpha-beta regulatory T cell (CL0000795)
    Fold Change: 22.3510
    Cell Significance Index: -68.6500
  • Cell Name: stromal cell of bone marrow (CL0010001)
    Fold Change: 19.9035
    Cell Significance Index: -78.5400
  • Cell Name: cortical interneuron (CL0008031)
    Fold Change: 5.9731
    Cell Significance Index: 143.2500
  • Cell Name: forebrain neuroblast (CL1000042)
    Fold Change: 5.0621
    Cell Significance Index: 311.1400
  • Cell Name: obsolete caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 3.8855
    Cell Significance Index: 1393.6700
  • Cell Name: retinal progenitor cell (CL0002672)
    Fold Change: 3.0174
    Cell Significance Index: 169.3200
  • Cell Name: indirect pathway medium spiny neuron (CL4023029)
    Fold Change: 2.0736
    Cell Significance Index: 91.7200
  • Cell Name: direct pathway medium spiny neuron (CL4023026)
    Fold Change: 1.9893
    Cell Significance Index: 75.3300
  • Cell Name: hippocampal granule cell (CL0001033)
    Fold Change: 1.8633
    Cell Significance Index: 125.2900
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 1.6163
    Cell Significance Index: 320.7700
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.5692
    Cell Significance Index: 1085.3300
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 1.4319
    Cell Significance Index: 109.8900
  • Cell Name: hippocampal interneuron (CL1001569)
    Fold Change: 1.0626
    Cell Significance Index: 13.7800
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 1.0429
    Cell Significance Index: 1963.6200
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 1.0361
    Cell Significance Index: 207.8400
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 0.9447
    Cell Significance Index: 599.9700
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.8776
    Cell Significance Index: 95.4600
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.6775
    Cell Significance Index: 110.1900
  • Cell Name: gut absorptive cell (CL0000677)
    Fold Change: 0.5637
    Cell Significance Index: 33.8400
  • Cell Name: basal cell of urothelium (CL1000486)
    Fold Change: 0.5055
    Cell Significance Index: 62.1600
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 0.4400
    Cell Significance Index: 677.4100
  • Cell Name: hippocampal pyramidal neuron (CL1001571)
    Fold Change: 0.3262
    Cell Significance Index: 9.3100
  • Cell Name: hair follicular keratinocyte (CL2000092)
    Fold Change: 0.3254
    Cell Significance Index: 143.8700
  • Cell Name: ciliary muscle cell (CL1000443)
    Fold Change: 0.3191
    Cell Significance Index: 144.8500
  • Cell Name: intermediate cell of urothelium (CL4030055)
    Fold Change: 0.3162
    Cell Significance Index: 57.0100
  • Cell Name: adipocyte of breast (CL0002617)
    Fold Change: 0.3002
    Cell Significance Index: 3.7800
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 0.2964
    Cell Significance Index: 546.7000
  • Cell Name: early pro-B cell (CL0002046)
    Fold Change: 0.2941
    Cell Significance Index: 18.9800
  • Cell Name: enteroendocrine cell of colon (CL0009042)
    Fold Change: 0.2841
    Cell Significance Index: 54.0600
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 0.2815
    Cell Significance Index: 153.7400
  • Cell Name: fibro/adipogenic progenitor cell (CL0009099)
    Fold Change: 0.2705
    Cell Significance Index: 13.6700
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.2341
    Cell Significance Index: 211.3800
  • Cell Name: microfold cell of epithelium of small intestine (CL1000353)
    Fold Change: 0.2078
    Cell Significance Index: 14.3700
  • Cell Name: placental villous trophoblast (CL2000060)
    Fold Change: 0.1979
    Cell Significance Index: 5.2900
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 0.1962
    Cell Significance Index: 266.8200
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 0.1837
    Cell Significance Index: 18.1700
  • Cell Name: tonsil germinal center B cell (CL2000006)
    Fold Change: 0.1174
    Cell Significance Index: 13.8400
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 0.0768
    Cell Significance Index: 10.5500
  • Cell Name: paneth cell of epithelium of small intestine (CL1000343)
    Fold Change: -0.0150
    Cell Significance Index: -0.3300
  • Cell Name: luminal adaptive secretory precursor cell of mammary gland (CL4033057)
    Fold Change: -0.0689
    Cell Significance Index: -3.2400
  • Cell Name: kidney loop of Henle cortical thick ascending limb epithelial cell (CL1001109)
    Fold Change: -0.0726
    Cell Significance Index: -53.2000
  • Cell Name: pulmonary alveolar epithelial cell (CL0000322)
    Fold Change: -0.0760
    Cell Significance Index: -57.4900
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: -0.0805
    Cell Significance Index: -8.2200
  • Cell Name: odontoblast (CL0000060)
    Fold Change: -0.0924
    Cell Significance Index: -11.8400
  • Cell Name: pancreatic A cell (CL0000171)
    Fold Change: -0.0950
    Cell Significance Index: -70.4000
  • Cell Name: type B pancreatic cell (CL0000169)
    Fold Change: -0.1375
    Cell Significance Index: -77.5400
  • Cell Name: pancreatic PP cell (CL0002275)
    Fold Change: -0.1480
    Cell Significance Index: -92.4000
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: -0.1525
    Cell Significance Index: -5.3600
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: -0.1763
    Cell Significance Index: -5.0800
  • Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
    Fold Change: -0.1814
    Cell Significance Index: -13.5200
  • Cell Name: lactocyte (CL0002325)
    Fold Change: -0.1830
    Cell Significance Index: -23.6500
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: -0.2292
    Cell Significance Index: -33.3200
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: -0.2491
    Cell Significance Index: -71.6800
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: -0.2995
    Cell Significance Index: -13.5800
  • Cell Name: epithelial cell of stomach (CL0002178)
    Fold Change: -0.3303
    Cell Significance Index: -38.4900
  • Cell Name: sebum secreting cell (CL0000317)
    Fold Change: -0.3375
    Cell Significance Index: -23.8700
  • Cell Name: pancreatic acinar cell (CL0002064)
    Fold Change: -0.3801
    Cell Significance Index: -64.9100
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: -0.3916
    Cell Significance Index: -40.7700
  • Cell Name: pancreatic D cell (CL0000173)
    Fold Change: -0.4166
    Cell Significance Index: -87.7400
  • Cell Name: fibroblast of mammary gland (CL0002555)
    Fold Change: -0.4204
    Cell Significance Index: -12.0500
  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: -0.5536
    Cell Significance Index: -7.9500
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: -0.6310
    Cell Significance Index: -72.2900
  • Cell Name: type I muscle cell (CL0002211)
    Fold Change: -0.6746
    Cell Significance Index: -16.4600
  • Cell Name: glycinergic neuron (CL1001509)
    Fold Change: -0.7022
    Cell Significance Index: -36.8700
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: -0.7352
    Cell Significance Index: -46.3400
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: -0.7656
    Cell Significance Index: -35.7000
  • Cell Name: hippocampal astrocyte (CL0002604)
    Fold Change: -0.8446
    Cell Significance Index: -11.8100
  • Cell Name: Hofbauer cell (CL3000001)
    Fold Change: -0.8685
    Cell Significance Index: -7.0800
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: -0.8844
    Cell Significance Index: -18.9100
  • Cell Name: kidney loop of Henle descending limb epithelial cell (CL1001021)
    Fold Change: -0.8966
    Cell Significance Index: -71.0100
  • Cell Name: bladder urothelial cell (CL1001428)
    Fold Change: -0.9194
    Cell Significance Index: -47.7600
  • Cell Name: lung endothelial cell (CL1001567)
    Fold Change: -1.0023
    Cell Significance Index: -52.2100
  • Cell Name: VIP GABAergic cortical interneuron (CL4023016)
    Fold Change: -1.2403
    Cell Significance Index: -24.9000
  • Cell Name: basal cell of prostate epithelium (CL0002341)
    Fold Change: -1.2421
    Cell Significance Index: -33.8100
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: -1.2881
    Cell Significance Index: -78.9700
  • Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
    Fold Change: -1.2918
    Cell Significance Index: -36.1000
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: -1.3802
    Cell Significance Index: -44.2100
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: -1.4142
    Cell Significance Index: -46.3000
  • Cell Name: regular atrial cardiac myocyte (CL0002129)
    Fold Change: -1.4143
    Cell Significance Index: -19.0700
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: -1.4382
    Cell Significance Index: -38.4700
  • Cell Name: cerebellar granule cell (CL0001031)
    Fold Change: -1.4988
    Cell Significance Index: -25.6900
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: -1.5260
    Cell Significance Index: -48.6000
  • Cell Name: CD4-positive, alpha-beta memory T cell, CD45RO-positive (CL0001204)
    Fold Change: -1.5394
    Cell Significance Index: -45.2100
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: -1.5725
    Cell Significance Index: -41.3500
  • Cell Name: mesonephric nephron tubule epithelial cell (CL1000022)
    Fold Change: -1.5853
    Cell Significance Index: -55.0900
  • Cell Name: cardiac muscle cell (CL0000746)
    Fold Change: -1.6514
    Cell Significance Index: -24.3800
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: -1.6699
    Cell Significance Index: -33.0200
  • Cell Name: endothelial cell of placenta (CL0009092)
    Fold Change: -1.6957
    Cell Significance Index: -10.2500
  • Cell Name: skeletal muscle fiber (CL0008002)
    Fold Change: -1.6989
    Cell Significance Index: -43.6700
  • Cell Name: conjunctival epithelial cell (CL1000432)
    Fold Change: -1.7056
    Cell Significance Index: -23.2700
  • Cell Name: pro-T cell (CL0000827)
    Fold Change: -1.7231
    Cell Significance Index: -44.0200

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics** Cyclin H is a highly conserved protein that is found in all eukaryotic cells. It is a member of the cyclin family, which is characterized by the presence of a conserved cyclin box domain. Cyclin H is specifically associated with the CDKAP complex, which consists of Cyclin H, CDK5RAP2, and CDK5. This complex plays a crucial role in the activation of CDKs, which are essential for the progression of cells through the cell cycle. Cyclin H is also involved in the regulation of transcription by RNA polymerase II. It interacts with the transcription factor TFIH, which is responsible for the initiation of transcription by RNA polymerase II. Cyclin H has been shown to regulate the activity of TFIH, and its dysregulation has been implicated in various diseases, including cancer and viral infections. **Pathways and Functions** Cyclin H is involved in several key pathways, including: 1. **Cell Cycle Regulation**: Cyclin H is a key component of the CDKAP complex, which plays a crucial role in the activation of CDKs. CDKs are essential for the progression of cells through the cell cycle, and their dysregulation can lead to cancer and other diseases. 2. **DNA Repair**: Cyclin H is involved in the regulation of DNA repair processes, including nucleotide excision repair (NER) and global genome nucleotide excision repair (GG-NER). Its dysregulation has been implicated in various diseases, including cancer and viral infections. 3. **Transcriptional Regulation**: Cyclin H regulates the activity of RNA polymerase II, which is responsible for the transcription of genes. Its dysregulation has been implicated in various diseases, including cancer and viral infections. 4. **HIV Infection**: Cyclin H has been shown to play a role in the regulation of HIV transcription and replication. Its dysregulation has been implicated in the pathogenesis of HIV infection. **Clinical Significance** Cyclin H dysregulation has been implicated in various diseases, including: 1. **Cancer**: Cyclin H dysregulation has been implicated in the development and progression of various cancers, including breast, lung, and colon cancer. 2. **Viral Infections**: Cyclin H dysregulation has been implicated in the pathogenesis of HIV infection and other viral infections, including hepatitis B and C. 3. **Neurological Disorders**: Cyclin H dysregulation has been implicated in the development of various neurological disorders, including Alzheimer's disease and Parkinson's disease. 4. **Cardiovascular Disease**: Cyclin H dysregulation has been implicated in the development of cardiovascular disease, including atherosclerosis and heart failure. In conclusion, Cyclin H is a critical protein that plays a key role in the regulation of the cell cycle, DNA repair, and transcriptional processes. Its dysregulation has been implicated in various diseases, including cancer, viral infections, and neurological disorders. Further research is needed to fully understand the role of Cyclin H in human disease and to develop effective therapeutic strategies for the treatment of these diseases.

Genular Protein ID: 2847686331

Symbol: CCNH_HUMAN

Name: Cyclin-H

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 8078587

Title: A cyclin associated with the CDK-activating kinase MO15.

PubMed ID: 8078587

DOI: 10.1038/371254a0

PubMed ID: 8069918

Title: A novel cyclin associates with MO15/CDK7 to form the CDK-activating kinase.

PubMed ID: 8069918

DOI: 10.1016/0092-8674(94)90535-5

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7533895

Title: Cdk-activating kinase complex is a component of human transcription factor TFIIH.

PubMed ID: 7533895

DOI: 10.1038/374283a0

PubMed ID: 9852112

Title: Immunoaffinity purification and functional characterization of human transcription factor IIH and RNA polymerase II from clonal cell lines that conditionally express epitope-tagged subunits of the multiprotein complexes.

PubMed ID: 9852112

DOI: 10.1074/jbc.273.51.34444

PubMed ID: 10024882

Title: Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7.

PubMed ID: 10024882

DOI: 10.1016/s1097-2765(00)80177-x

PubMed ID: 10993082

Title: TFIIH is negatively regulated by cdk8-containing mediator complexes.

PubMed ID: 10993082

DOI: 10.1038/35024111

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 18691976

Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.

PubMed ID: 18691976

DOI: 10.1016/j.molcel.2008.07.007

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19369195

Title: Large-scale proteomics analysis of the human kinome.

PubMed ID: 19369195

DOI: 10.1074/mcp.m800588-mcp200

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 8836101

Title: Three-dimensional structure of human cyclin H, a positive regulator of the CDK-activating kinase.

PubMed ID: 8836101

DOI: 10.1038/nsb1096-849

PubMed ID: 9118957

Title: The structure of cyclin H: common mode of kinase activation and specific features.

PubMed ID: 9118957

DOI: 10.1093/emboj/16.5.958

Sequence Information:

  • Length: 323
  • Mass: 37643
  • Checksum: BB48D55DA397A0E4
  • Sequence:
  • MYHNSSQKRH WTFSSEEQLA RLRADANRKF RCKAVANGKV LPNDPVFLEP HEEMTLCKYY 
    EKRLLEFCSV FKPAMPRSVV GTACMYFKRF YLNNSVMEYH PRIIMLTCAF LACKVDEFNV 
    SSPQFVGNLR ESPLGQEKAL EQILEYELLL IQQLNFHLIV HNPYRPFEGF LIDLKTRYPI 
    LENPEILRKT ADDFLNRIAL TDAYLLYTPS QIALTAILSS ASRAGITMES YLSESLMLKE 
    NRTCLSQLLD IMKSMRNLVK KYEPPRSEEV AVLKQKLERC HSAELALNVI TKKRKGYEDD 
    DYVSKKSKHE EEEWTDDDLV ESL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.