Details for: MTMR4
Gene ID: 9110
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: MTMR4
Ensembl ID: ENSG00000108389
Description: myotubularin related protein 4
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 10.8rCSI 18.68%PRS 62.34
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CSI 7.28rCSI 10.77%PRS 76.52
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CSI 6.75rCSI 11.06%PRS 60.75
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CSI 6.35rCSI 5.35%PRS 86.55
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CSI 6.21rCSI 13.21%PRS 67.88
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CSI 6.06rCSI 4.03%PRS 74.67
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CSI 5.24rCSI 19.62%PRS 63.67
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CSI 4.05rCSI 5.56%PRS 88.99
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CSI 4.02rCSI 6.15%PRS 76.1
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CSI 3.94rCSI 14.17%PRS 51.15
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CSI 3.8rCSI 2.25%PRS 87.93
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CSI 3.38rCSI 7.47%PRS 70.65
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CSI 3.24rCSI 4.81%PRS 72.43
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CSI 3.2rCSI 9.46%PRS 73.76
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CSI 3.13rCSI 7.34%PRS 73.98
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CSI 3.12rCSI 7.45%PRS 72.07
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CSI 2.98rCSI 2.61%PRS 80.17
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CSI 2.96rCSI 12.04%PRS 64.53
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CSI 2.84rCSI 6.49%PRS 72.46
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CSI 2.82rCSI 2.11%PRS 86.2
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CSI 2.75rCSI 39%PRS 62.67
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CSI 2.74rCSI 2.17%PRS 59.23
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CSI 2.72rCSI 2.01%PRS 64.58
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CSI 2.68rCSI 4.09%PRS 68.34
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CSI 2.67rCSI 2.1%PRS 78.32
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CSI 2.61rCSI 3.32%PRS 77.53
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CSI 2.6rCSI 2.78%PRS 72.44
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CSI 2.53rCSI 5.08%PRS 61.14
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CSI 2.47rCSI 3.08%PRS 51.08
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CSI 2.44rCSI 5.46%PRS 53.61
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CSI 2.43rCSI 4.34%PRS 71.19
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CSI 2.35rCSI 2.57%PRS 74.69
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CSI 2.31rCSI 2.42%PRS 68.86
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CSI 2.31rCSI 1.55%PRS 84.97
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CSI 2.28rCSI 2.93%PRS 54.38
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CSI 2.27rCSI 3.98%PRS 64.38
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CSI 2.25rCSI 2.3%PRS 82.6
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CSI 2.21rCSI 4.13%PRS 59.56
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CSI 2.18rCSI 5.04%PRS 59.86
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CSI 2.18rCSI 13.62%PRS 63.21
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CSI 2.17rCSI 2.05%PRS 71.1
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CSI 2.16rCSI 8.4%PRS 73.75
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CSI 2.14rCSI 3.6%PRS 53.01
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CSI 2.1rCSI 3.24%PRS 70.82
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CSI 2.07rCSI 4.72%PRS 63.08
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CSI 2.07rCSI 2.16%PRS 69.54
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CSI 2.06rCSI 1.86%PRS 69.19
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CSI 2.03rCSI 2.35%PRS 64.14
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CSI 2.03rCSI 41.25%PRS 61.83
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CSI 1.98rCSI 2.92%PRS 64.86
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CSI 1.96rCSI 2.81%PRS 73.81
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CSI 1.92rCSI 1.77%PRS 73.44
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CSI 1.91rCSI 2.37%PRS 69.06
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CSI 1.86rCSI 37.8%PRS 63.31
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CSI 1.82rCSI 4.75%PRS 67.84
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CSI 1.8rCSI 4.7%PRS 72.59
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CSI 1.8rCSI 2.45%PRS 63.11
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CSI 1.79rCSI 2.3%PRS 68.39
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CSI 1.77rCSI 2.42%PRS 63.9
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CSI 1.76rCSI 1.7%PRS 71.48
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CSI 1.69rCSI 4.14%PRS 64.85
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CSI 1.69rCSI 1.49%PRS 60.04
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CSI 1.66rCSI 3.67%PRS 57.56
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CSI 1.58rCSI 2.79%PRS 67.84
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CSI 1.56rCSI 1.86%PRS 52.86
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CSI 1.54rCSI 2.48%PRS 61.25
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CSI 1.31rCSI 3.45%PRS 79.98
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CSI 1.31rCSI 2.31%PRS 52.09
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CSI 1.3rCSI 2.09%PRS 54.88
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CSI 1.29rCSI 3.73%PRS 60.96
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CSI 1.26rCSI 1.81%PRS 61.21
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CSI 1.2rCSI 3.44%PRS 81.75
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CSI 1.15rCSI 1%PRS 82.25
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CSI 1.13rCSI 2.01%PRS 42.69
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CSI 1.11rCSI 3.56%PRS 68.88
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CSI 1.08rCSI 3.37%PRS 57.28
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CSI 1.05rCSI 1.43%PRS 39.74
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CSI 1.01rCSI 1.23%PRS 54.93
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CSI 0.97rCSI 3.02%PRS 54.82
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CSI 0.96rCSI 2.34%PRS 51.36
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CSI 0.95rCSI 3.64%PRS 62.19
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CSI 0.92rCSI 3.49%PRS 53.57
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CSI 0.84rCSI 6.16%PRS 58.51
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CSI 0.84rCSI 2.81%PRS 56.19
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CSI 0.84rCSI 6.81%PRS 65.22
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CSI 0.57rCSI 3.37%PRS 54.12
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CSI 0.5rCSI 12.11%PRS 52.52
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CSI 0.4rCSI 9.51%PRS 51.9
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 943657484
Symbol: MTMR4_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11302699
Title: FYVE-DSP2, a FYVE domain-containing dual specificity protein phosphatase that dephosphorylates phosphatidylinositol 3-phosphate.
PubMed ID: 11302699
PubMed ID: 9734811
Title: Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.
PubMed ID: 9734811
PubMed ID: 12168954
Title: Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.
PubMed ID: 12168954
PubMed ID: 16625196
Title: DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
PubMed ID: 16625196
DOI: 10.1038/nature04689
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 16787938
Title: Systematic analysis of myotubularins: heteromeric interactions, subcellular localisation and endosome related functions.
PubMed ID: 16787938
DOI: 10.1242/jcs.03040
PubMed ID: 19125695
Title: The inositol phosphatase MTMR4 is a novel target of the ubiquitin ligase Nedd4.
PubMed ID: 19125695
DOI: 10.1042/bj20081866
PubMed ID: 20061380
Title: MTMR4 attenuates transforming growth factor beta (TGFbeta) signaling by dephosphorylating R-Smads in endosomes.
PubMed ID: 20061380
PubMed ID: 20736309
Title: The myotubularin phosphatase MTMR4 regulates sorting from early endosomes.
PubMed ID: 20736309
DOI: 10.1242/jcs.060103
PubMed ID: 23150675
Title: Myotubularin-related protein 4 (MTMR4) attenuates BMP/Dpp signaling by dephosphorylation of Smad proteins.
PubMed ID: 23150675
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
PubMed ID: 25659891
Title: Myotubularin-related proteins 3 and 4 interact with polo-like kinase 1 and centrosomal protein of 55 kDa to ensure proper abscission.
PubMed ID: 25659891
PubMed ID: 27625994
Title: MTMR4 Is Required for the Stability of the Salmonella-Containing Vacuole.
PubMed ID: 27625994
PubMed ID: 29962048
Title: MTMR4, a phosphoinositide-specific 3'-phosphatase, regulates TFEB activity and the endocytic and autophagic pathways.
PubMed ID: 29962048
DOI: 10.1111/gtc.12609
PubMed ID: 30944173
Title: PtdIns3P phosphatases MTMR3 and MTMR4 negatively regulate innate immune responses to DNA through modulating STING trafficking.
PubMed ID: 30944173
PubMed ID: 31543504
Title: The myotubularin MTMR4 regulates phagosomal phosphatidylinositol 3-phosphate turnover and phagocytosis.
PubMed ID: 31543504
Sequence Information:
- Length: 1195
- Mass: 133353
- Checksum: 936EC3F69335CEB4
- Sequence:
MGEEGPPSLE YIQAKDLFPP KELVKEEENL QVPFTVLQGE GVEFLGRAAD ALIAISNYRL HIKFKDSVIN VPLRMIDSVE SRDMFQLHIS CKDSKVVRCH FSTFKQCQEW LSRLSRATAR PAKPEDLFAF AYHAWCLGLT EEDQHTHLCQ PGEHIRCRQE AELARMGFDL QNVWRVSHIN SNYKLCPSYP QKLLVPVWIT DKELENVASF RSWKRIPVVV YRHLRNGAAI ARCSQPEISW WGWRNADDEY LVTSIAKACA LDPGTRATGG SLSTGNNDTS EACDADFDSS LTACSGVEST AAPQKLLILD ARSYTAAVAN RAKGGGCECE EYYPNCEVVF MGMANIHAIR NSFQYLRAVC SQMPDPSNWL SALESTKWLQ HLSVMLKAAV LVANTVDREG RPVLVHCSDG WDRTPQIVAL AKILLDPYYR TLEGFQVLVE SDWLDFGHKF GDRCGHQENV EDQNEQCPVF LQWLDSVHQL LKQFPCLFEF NEAFLVKLVQ HTYSCLYGTF LANNPCEREK RNIYKRTCSV WALLRAGNKN FHNFLYTPSS DMVLHPVCHV RALHLWTAVY LPASSPCTLG EENMDLYLSP VAQSQEFSGR SLDRLPKTRS MDDLLSACDT SSPLTRTSSD PNLNNHCQEV RVGLEPWHSN PEGSETSFVD SGVGGPQQTV GEVGLPPPLP SSQKDYLSNK PFKSHKSCSP SYKLLNTAVP REMKSNTSDP EIKVLEETKG PAPDPSAQDE LGRTLDGIGE PPEHCPETEA VSALSKVISN KCDGVCNFPE SSQNSPTGTP QQAQPDSMLG VPSKCVLDHS LSTVCNPPSA ACQTPLDPST DFLNQDPSGS VASISHQEQL SSVPDLTHGE EDIGKRGNNR NGQLLENPRF GKMPLELVRK PISQSQISEF SFLGSNWDSF QGMVTSFPSG EATPRRLLSY GCCSKRPNSK QMRATGPCFG GQWAQREGVK SPVCSSHSNG HCTGPGGKNQ MWLSSHPKQV SSTKPVPLNC PSPVPPLYLD DDGLPFPTDV IQHRLRQIEA GYKQEVEQLR RQVRELQMRL DIRHCCAPPA EPPMDYEDDF TCLKESDGSD TEDFGSDHSE DCLSEASWEP VDKKETEVTR WVPDHMASHC YNCDCEFWLA KRRHHCRNCG NVFCAGCCHL KLPIPDQQLY DPVLVCNSCY EHIQVSRARE LMSQQLKKPI ATASS