Details for: SNCAIP

Gene ID: 9627

Symbol: SNCAIP

Ensembl ID: ENSG00000064692

Description: synuclein alpha interacting protein

Associated with

Cells (max top 100)

(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: fibroblast of cardiac tissue (CL0002548)
    Fold Change: 2.78
    Marker Score: 16,723
  • Cell Name: CNS interneuron (CL0000402)
    Fold Change: 2.53
    Marker Score: 1,217
  • Cell Name: interneuron (CL0000099)
    Fold Change: 2.34
    Marker Score: 1,067
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: 2.25
    Marker Score: 710
  • Cell Name: neuronal brush cell (CL0000555)
    Fold Change: 2.17
    Marker Score: 7,272
  • Cell Name: leptomeningeal cell (CL0000708)
    Fold Change: 1.81
    Marker Score: 896
  • Cell Name: pigmented ciliary epithelial cell (CL0002303)
    Fold Change: 1.67
    Marker Score: 568
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 1.67
    Marker Score: 24,897
  • Cell Name: colon goblet cell (CL0009039)
    Fold Change: 1.59
    Marker Score: 1,159
  • Cell Name: brainstem motor neuron (CL2000047)
    Fold Change: 1.57
    Marker Score: 910
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 1.47
    Marker Score: 6,156
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.47
    Marker Score: 168,246
  • Cell Name: enterocyte of epithelium of large intestine (CL0002071)
    Fold Change: 1.46
    Marker Score: 1,457
  • Cell Name: basal epithelial cell of prostatic duct (CL0002236)
    Fold Change: 1.44
    Marker Score: 1,276
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 1.39
    Marker Score: 14,324
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 1.38
    Marker Score: 5,332
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 1.31
    Marker Score: 27,891
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.19
    Marker Score: 459
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 1.18
    Marker Score: 39,963
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: 1.18
    Marker Score: 9,040
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 1.16
    Marker Score: 42,815
  • Cell Name: transit amplifying cell of small intestine (CL0009012)
    Fold Change: 1.16
    Marker Score: 481
  • Cell Name: cerebellar granule cell precursor (CL0002362)
    Fold Change: 1.15
    Marker Score: 646
  • Cell Name: enterocyte of epithelium of small intestine (CL1000334)
    Fold Change: 1.14
    Marker Score: 4,790
  • Cell Name: immature innate lymphoid cell (CL0001082)
    Fold Change: 1.12
    Marker Score: 2,283
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 1.1
    Marker Score: 322
  • Cell Name: stromal cell of ovary (CL0002132)
    Fold Change: 1.09
    Marker Score: 12,240
  • Cell Name: granulocyte monocyte progenitor cell (CL0000557)
    Fold Change: 1.06
    Marker Score: 674
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 1.05
    Marker Score: 910
  • Cell Name: fallopian tube secretory epithelial cell (CL4030006)
    Fold Change: 1.04
    Marker Score: 251,768
  • Cell Name: neuron (CL0000540)
    Fold Change: 1.04
    Marker Score: 4,219
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 1
    Marker Score: 9,435
  • Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
    Fold Change: 1
    Marker Score: 71,788
  • Cell Name: forebrain radial glial cell (CL0013000)
    Fold Change: 1
    Marker Score: 48,012
  • Cell Name: neural progenitor cell (CL0011020)
    Fold Change: 0.99
    Marker Score: 3,823
  • Cell Name: absorptive cell (CL0000212)
    Fold Change: 0.98
    Marker Score: 30,405
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 0.98
    Marker Score: 37,085
  • Cell Name: tuft cell of colon (CL0009041)
    Fold Change: 0.98
    Marker Score: 503
  • Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
    Fold Change: 0.97
    Marker Score: 456
  • Cell Name: intestinal crypt stem cell of colon (CL0009043)
    Fold Change: 0.95
    Marker Score: 2,411
  • Cell Name: transit amplifying cell (CL0009010)
    Fold Change: 0.94
    Marker Score: 5,342
  • Cell Name: mesothelial cell of epicardium (CL0011019)
    Fold Change: 0.93
    Marker Score: 300
  • Cell Name: smooth muscle cell of prostate (CL1000487)
    Fold Change: 0.93
    Marker Score: 237
  • Cell Name: small intestine goblet cell (CL1000495)
    Fold Change: 0.92
    Marker Score: 369
  • Cell Name: abnormal cell (CL0001061)
    Fold Change: 0.91
    Marker Score: 2,734
  • Cell Name: epithelial cell of small intestine (CL0002254)
    Fold Change: 0.89
    Marker Score: 321
  • Cell Name: epithelial cell of prostate (CL0002231)
    Fold Change: 0.88
    Marker Score: 608
  • Cell Name: neoplastic cell (CL0001063)
    Fold Change: 0.87
    Marker Score: 5,278
  • Cell Name: transit amplifying cell of colon (CL0009011)
    Fold Change: 0.87
    Marker Score: 399
  • Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
    Fold Change: 0.83
    Marker Score: 1,954
  • Cell Name: early T lineage precursor (CL0002425)
    Fold Change: 0.82
    Marker Score: 625
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: 0.79
    Marker Score: 3,672
  • Cell Name: endocardial cell (CL0002350)
    Fold Change: 0.78
    Marker Score: 443
  • Cell Name: intestinal epithelial cell (CL0002563)
    Fold Change: 0.77
    Marker Score: 1,254
  • Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
    Fold Change: 0.77
    Marker Score: 463
  • Cell Name: brush cell (CL0002204)
    Fold Change: 0.77
    Marker Score: 701
  • Cell Name: kidney interstitial fibroblast (CL1000692)
    Fold Change: 0.77
    Marker Score: 1,472
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 0.76
    Marker Score: 3,169
  • Cell Name: Cajal-Retzius cell (CL0000695)
    Fold Change: 0.76
    Marker Score: 392
  • Cell Name: precursor B cell (CL0000817)
    Fold Change: 0.75
    Marker Score: 495
  • Cell Name: interstitial cell of ovary (CL0002094)
    Fold Change: 0.75
    Marker Score: 4,860
  • Cell Name: mesangial cell (CL0000650)
    Fold Change: 0.74
    Marker Score: 897
  • Cell Name: cardiac muscle myoblast (CL0000513)
    Fold Change: 0.74
    Marker Score: 11,601
  • Cell Name: cerebral cortex neuron (CL0010012)
    Fold Change: 0.71
    Marker Score: 2,028
  • Cell Name: lung ciliated cell (CL1000271)
    Fold Change: 0.7
    Marker Score: 333
  • Cell Name: neutrophil progenitor cell (CL0000834)
    Fold Change: 0.69
    Marker Score: 177
  • Cell Name: ciliated cell (CL0000064)
    Fold Change: 0.67
    Marker Score: 2,310
  • Cell Name: decidual cell (CL2000002)
    Fold Change: 0.67
    Marker Score: 2,868
  • Cell Name: epithelial cell of alveolus of lung (CL0010003)
    Fold Change: 0.66
    Marker Score: 298
  • Cell Name: renal beta-intercalated cell (CL0002201)
    Fold Change: 0.65
    Marker Score: 206
  • Cell Name: mature astrocyte (CL0002627)
    Fold Change: 0.61
    Marker Score: 399
  • Cell Name: meningeal macrophage (CL0000879)
    Fold Change: 0.6
    Marker Score: 170
  • Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
    Fold Change: 0.59
    Marker Score: 5,106
  • Cell Name: kidney capillary endothelial cell (CL1000892)
    Fold Change: 0.58
    Marker Score: 183
  • Cell Name: mesodermal cell (CL0000222)
    Fold Change: 0.57
    Marker Score: 7,498
  • Cell Name: pulmonary interstitial fibroblast (CL0002241)
    Fold Change: 0.56
    Marker Score: 448
  • Cell Name: intestinal enteroendocrine cell (CL1001516)
    Fold Change: 0.56
    Marker Score: 444
  • Cell Name: preosteoblast (CL0007010)
    Fold Change: 0.55
    Marker Score: 155
  • Cell Name: intestinal tuft cell (CL0019032)
    Fold Change: 0.54
    Marker Score: 172
  • Cell Name: enteric smooth muscle cell (CL0002504)
    Fold Change: 0.52
    Marker Score: 1,218
  • Cell Name: macroglial cell (CL0000126)
    Fold Change: 0.51
    Marker Score: 1,183
  • Cell Name: endothelial cell of lymphatic vessel (CL0002138)
    Fold Change: 0.51
    Marker Score: 317
  • Cell Name: intestinal crypt stem cell of small intestine (CL0009017)
    Fold Change: 0.51
    Marker Score: 343
  • Cell Name: Mueller cell (CL0000636)
    Fold Change: 0.5
    Marker Score: 688
  • Cell Name: mononuclear cell (CL0000842)
    Fold Change: 0.49
    Marker Score: 158
  • Cell Name: osteoblast (CL0000062)
    Fold Change: 0.49
    Marker Score: 263
  • Cell Name: common myeloid progenitor (CL0000049)
    Fold Change: 0.49
    Marker Score: 129
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 0.48
    Marker Score: 29,639
  • Cell Name: smooth muscle myoblast (CL0000514)
    Fold Change: 0.47
    Marker Score: 225
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: 0.47
    Marker Score: 579
  • Cell Name: mesothelial cell (CL0000077)
    Fold Change: 0.45
    Marker Score: 180
  • Cell Name: granule cell (CL0000120)
    Fold Change: 0.43
    Marker Score: 3,266
  • Cell Name: connective tissue cell (CL0002320)
    Fold Change: 0.43
    Marker Score: 112
  • Cell Name: stellate neuron (CL0000122)
    Fold Change: 0.43
    Marker Score: 2,308
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 0.43
    Marker Score: 8,541
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 0.42
    Marker Score: 715
  • Cell Name: ciliated epithelial cell (CL0000067)
    Fold Change: 0.42
    Marker Score: 192
  • Cell Name: lung goblet cell (CL1000143)
    Fold Change: 0.42
    Marker Score: 121
  • Cell Name: multi-ciliated epithelial cell (CL0005012)
    Fold Change: 0.41
    Marker Score: 787
  • Cell Name: kidney interstitial cell (CL1000500)
    Fold Change: 0.41
    Marker Score: 293

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** SNCAIP is a protein that interacts with synuclein alpha, a protein associated with neurodegenerative diseases such as Parkinson's disease and Alzheimer's disease. SNCAIP is highly expressed in various cell types, including fibroblasts from cardiac tissue, CNS interneurons, smooth muscle cells, and neuronal brush cells. Its expression patterns and interactions with other proteins suggest a multifaceted role in maintaining cellular homeostasis. **Pathways and Functions:** SNCAIP is involved in several key pathways: 1. **Amyloid fiber formation:** SNCAIP interacts with synuclein alpha, influencing the formation of amyloid fibrils, which are associated with neurodegenerative diseases. 2. **Cell death:** SNCAIP has been implicated in the regulation of apoptosis (programmed cell death) in various cell types, including neurons and immune cells. 3. **Dopamine metabolic process:** SNCAIP interacts with dopamine-related proteins, suggesting a role in regulating dopamine signaling pathways. 4. **Protein binding and regulation:** SNCAIP binds to various proteins, including ubiquitin ligases, influencing protein degradation and inclusion body assembly. 5. **Neurotransmitter secretion:** SNCAIP regulates the release of neurotransmitters, such as GABA, in the brain. **Clinical Significance:** SNCAIP dysregulation has been implicated in several diseases, including: 1. **Neurodegenerative disorders:** SNCAIP's interaction with synuclein alpha contributes to the development of neurodegenerative diseases, such as Parkinson's disease and Alzheimer's disease. 2. **Immune system dysregulation:** SNCAIP's role in regulating apoptosis and protein binding may contribute to immune system dysfunction, as seen in autoimmune diseases. 3. **Cancer:** SNCAIP's involvement in protein metabolism and regulation may also contribute to cancer development and progression. In conclusion, SNCAIP is a multifunctional protein that plays a critical role in regulating protein metabolism, neuronal function, and immune response. Its dysregulation has been implicated in various diseases, highlighting the importance of further research into the mechanisms underlying its functions and its potential as a therapeutic target.

Genular Protein ID: 4230995985

Symbol: SNCAP_HUMAN

Name: Synphilin-1

UniProtKB Accession Codes:

Q9Y6H5 D3DSZ1 Q05BS1 Q1PSC2 Q49AC6 Q504U9 Q6L984 Q6L985 Q6L986 Q9HC59

Database IDs:

AGR 1 AlphaFoldDB 1 Antibodypedia 1 BMRB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 2 CORUM 1 CTD 1 ChEMBL 1 ChiTaRS 1 DIP 1 DMDM 1 DNASU 1 DisGeNET 1 EMBL 16 EPD 1 Ensembl 3 EvolutionaryTrace 1 ExpressionAtlas 1 GO 13 Gene3D 2 GeneCards 1 GeneTree 1 GeneWiki 1 Genevisible 1 GenomeRNAi 1 GlyGen 1 HGNC 1 HOGENOM 1 HPA 1 InParanoid 1 IntAct 1 InterPro 4 KEGG 1 MANE-Select 1 MIM 3 MINT 1 MalaCards 1 MassIVE 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 2 PDBsum 1 PRO 1 PROSITE 2 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 2 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 6 RNAct 1 Reactome 1 RefSeq 15 SAM 1 SIGNOR 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TreeFam 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 10319874

Title: Synphilin-1 associates with alpha-synuclein and promotes the formation of cytosolic inclusions.

PubMed ID: 10319874

DOI: 10.1038/8820

PubMed ID: 10967135

Title: Organization of the human synphilin-1 gene, a candidate for Parkinson's disease.

PubMed ID: 10967135

DOI: 10.1007/s003350010123

PubMed ID: 16595633

Title: Synphilin-1A: an aggregation-prone isoform of synphilin-1 that causes neuronal death and is present in aggregates from alpha-synucleinopathy patients.

PubMed ID: 16595633

DOI: 10.1073/pnas.0509707103

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11590439

Title: Parkin ubiquitinates the alpha-synuclein-interacting protein, synphilin-1: implications for Lewy-body formation in Parkinson disease.

PubMed ID: 11590439

DOI: 10.1038/nm1001-1144

PubMed ID: 12750386

Title: Dorfin localizes to Lewy bodies and ubiquitylates synphilin-1.

PubMed ID: 12750386

DOI: 10.1074/jbc.m302763200

PubMed ID: 14506261

Title: Siah-1 facilitates ubiquitination and degradation of synphilin-1.

PubMed ID: 14506261

DOI: 10.1074/jbc.m306347200

PubMed ID: 15064394

Title: Ubiquitylation of synphilin-1 and alpha-synuclein by SIAH and its presence in cellular inclusions and Lewy bodies imply a role in Parkinson's disease.

PubMed ID: 15064394

DOI: 10.1073/pnas.0401081101

PubMed ID: 19224863

Title: Synphilin-1A inhibits seven in absentia homolog (SIAH) and modulates alpha-synuclein monoubiquitylation and inclusion formation.

PubMed ID: 19224863

DOI: 10.1074/jbc.m805990200

PubMed ID: 19762560

Title: Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.

PubMed ID: 19762560

DOI: 10.1096/fj.09-133082

PubMed ID: 12761037

Title: Identification and functional characterization of a novel R621C mutation in the synphilin-1 gene in Parkinson's disease.

PubMed ID: 12761037

DOI: 10.1093/hmg/ddg134

PubMed ID: 18366718

Title: Genetic association study of synphilin-1 in idiopathic Parkinson's disease.

PubMed ID: 18366718

DOI: 10.1186/1471-2350-9-19

Sequence Information:

  • Length: 919
  • Mass: 100409
  • Checksum: 55C5316F250D0480
  • Sequence:
    • MEAPEYLDLD EIDFSDDISY SVTSLKTIPE LCRRCDTQNE DRSVSSSSWN CGISTLITNT 
QKPTGIADVY SKFRPVKRVS PLKHQPETLE NNESDDQKNQ KVVEYQKGGE SDLGPQPQEL 
GPGDGVGGPP GKSSEPSTSL GELEHYDLDM DEILDVPYIK SSQQLASFTK VTSEKRILGL 
CTTINGLSGK ACSTGSSESS SSNMAPFCVL SPVKSPHLRK ASAVIHDQHK LSTEETEISP 
PLVKCGSAYE PENQSKDFLN KTFSDPHGRK VEKTTPDCQL RAFHLQSSAA ESKPEEQVSG 
LNRTSSQGPE ERSEYLKKVK SILNIVKEGQ ISLLPHLAAD NLDKIHDENG NNLLHIAASQ 
GHAECLQHLT SLMGEDCLNE RNTEKLTPAG LAIKNGQLEC VRWMVSETEA IAELSCSKDF 
PSLIHYAGCY GQEKILLWLL QFMQEQGISL DEVDQDGNSA VHVASQHGYL GCIQTLVEYG 
ANVTMQNHAG EKPSQSAERQ GHTLCSRYLV VVETCMSLAS QVVKLTKQLK EQTVERVTLQ 
NQLQQFLEAQ KSEGKSLPSS PSSPSSPASR KSQWKSPDAD DDSVAKSKPG VQEGIQVLGS 
LSASSRARPK AKDEDSDKIL RQLLGKEISE NVCTQEKLSL EFQDAQASSR NSKKIPLEKR 
ELKLARLRQL MQRSLSESDT DSNNSEDPKT TPVRKADRPR PQPIVESVES MDSAESLHLM 
IKKHTLASGG RRFPFSIKAS KSLDGHSPSP TSESSEPDLE SQYPGSGSIP PNQPSGDPQQ 
PSPDSTAAQK VATSPKSALK SPSSKRRTSQ NLKLRVTFEE PVVQMEQPSL ELNGEKDKDK 
GRTLQRTSTS NESGDQLKRP FGAFRSIMET LSGNQNNNNN YQAANQLKTS TLPLTSLGRK 
TDAKGNPASS ASKGKNKAA

Genular Protein ID: 19239869

Symbol: B7Z616_HUMAN

Name: N/A

UniProtKB Accession Codes:

B7Z616

Database IDs:

AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 Gene3D 2 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 3 ProteomicsDB 1 RefSeq 3 SAM 2 SMART 1 SUPFAM 1

Sequence Information:

  • Length: 477
  • Mass: 51861
  • Checksum: A67FB9ACA4EE5F60
  • Sequence:
    • MQEQGISLDE VDQDGNSAVH VASQHGYLGC IQTLVEYGAN VTMQNHAGEK PSQSAERQGH 
TLCSRYLVVV ETCMSLASQV VKLTKQLKEQ TVERVTLQNQ LQQFLEAQKS EGKSLPSSPS 
SPSSPASRKS QWKSPDADDD SVAKSKPGVQ EGIQVLGSLS ASSRARPKAK DEDSDKILRQ 
LLGKEISENV CTQEKLSLEF QDAQASSRNS KKIPLEKREL KLARLRQLMQ RSLSESDTDS 
NNSEDPKTTP VRKADRPRPQ PIVESVESMD SAESLHLMIK KHTLASGGRR FPFSIKASKS 
LDGHSPSPTS ESSEPDLESQ YPGSGSIPPN QPSGDPQQPS PDSTAAQKVA TSPKSALKSP 
SSKRRTSQNL KLRVTFEEPV VQMEQPSLEL NGEKDKDKGR TLQRTSTSNE SGDQLKRPFG 
AFRSIMETLS GNQNNNNNYQ AANQLKTSTL PLTSLGRKTD AKGNPASSAS KGKNKAA

Genular Protein ID: 2884855244

Symbol: Q6L981_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q6L981

Database IDs:

Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 Ensembl 2 GeneTree 1 GenomeRNAi 1 HGNC 1 HOGENOM 1 MassIVE 1 NCBI Taxonomy 1 Proteomes 2 ProteomicsDB 1 RefSeq 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 15372022

Title: The DNA sequence and comparative analysis of human chromosome 5.

PubMed ID: 15372022

DOI: 10.1038/nature02919

Sequence Information:

  • Length: 88
  • Mass: 10219
  • Checksum: BFB7464F099FB1E5
  • Sequence:
    • MEAPEYLDLD EIDFSDDISY SVTSLKTIPE LCRRCDTQNE DRSATPSCRQ SRQNSRRKWK 
QSITYCGVTG TRRVSTAPHF FDGRRLPQ

Genular Protein ID: 1617641917

Symbol: B7Z995_HUMAN

Name: N/A

UniProtKB Accession Codes:

B7Z995 D6RHZ0

Database IDs:

AlphaFoldDB 1 BioGRID-ORCS 1 CTD 1 DNASU 1 EMBL 2 Gene3D 2 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 PANTHER 2 PROSITE 2 PROSITE-ProRule 1 PeptideAtlas 1 Pfam 3 ProteomicsDB 1 RefSeq 5 SAM 2 SMART 1 SUPFAM 1

Sequence Information:

  • Length: 521
  • Mass: 57160
  • Checksum: 533D2341C0645CFC
  • Sequence:
    • MKLTLVMTYL IQSHHSRRSQ NCAEDVIRKT KTDQEKILLW LLQFMQEQGI SLDEVDQDGN 
SAVHVASQHG YLGCIQTLVE YGANVTMQNH AGEKPSQSAE RQGHTLCSRY LVVVETCMSL 
ASQVVKLTKQ LKEQTVERVT LQNQLQQFLE AQKSEGKSLP SSPSSPSSPA SRKSQWKSPD 
ADDDSVAKSK PGVQEGIQVL GSLSASSRAR PKAKDEDSDK ILRQLLGKEI SENVCTQEKL 
SLEFQDAQAS SRNSKKIPLE KRELKLARLR QLMQRSLSES DTDSNNSEDP KTTPVRKADR 
PRPQPIVESV ESMDSAESLH LMIKKHTLAS GGRRFPFSIK ASKSLDGHSP SPTSESSEPD 
LESQYPGSGS IPPNQPSGDP QQPSPDSTAA QKVATSPKSA LKSPSSKRRT SQNLKLRVTF 
EEPVVQMEQP SLELNGEKDK DKGRTLQRTS TSNESGDQLK RPFGAFRSIM ETLSGNQNNN 
NNYQAANQLK TSTLPLTSLG RKTDAKGNPA SSASKGKNKA A

Genular Protein ID: 1678749930

Symbol: Q6L983_HUMAN

Name: N/A

UniProtKB Accession Codes:

Q6L983

Database IDs:

Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 Ensembl 3 GeneTree 1 GenomeRNAi 1 HGNC 1 HOGENOM 1 MassIVE 1 NCBI Taxonomy 1 Proteomes 2 RefSeq 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 15372022

Title: The DNA sequence and comparative analysis of human chromosome 5.

PubMed ID: 15372022

DOI: 10.1038/nature02919

Sequence Information:

  • Length: 113
  • Mass: 12838
  • Checksum: B80ABF7E3BEDFEE1
  • Sequence:
    • MEAPEYLDLD EIDFSDDISD NRSQGNRLQK LGLEDTDRED AMGFGSHRAK LTVVAALGAC 
HCPENEYSVT SLKTIPELCR RCDTQNEDRS EWSVGVRTLD GERNRSHCRT ELF

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.