SDC3 | ENSG00000162512 | NCBI 9672

Details for: SDC3

Gene ID: 9672

Symbol: SDC3

Ensembl ID: ENSG00000162512

Description: syndecan 3

Associated with

A tetrasaccharide linker sequence is required for gag synthesis
(R-HSA-1971475)
Attachment and entry
(R-HSA-9694614)
Cell surface interactions at the vascular wall
(R-HSA-202733)
Chondroitin sulfate/dermatan sulfate metabolism
(R-HSA-1793185)
Defective b3galt6 causes edsp2 and semdjl1
(R-HSA-4420332)
Defective b3gat3 causes jdssdhd
(R-HSA-3560801)
Defective b4galt7 causes eds, progeroid type
(R-HSA-3560783)
Defective ext1 causes exostoses 1, trps2 and chds
(R-HSA-3656253)
Defective ext2 causes exostoses 2
(R-HSA-3656237)
Disease
(R-HSA-1643685)
Diseases associated with glycosaminoglycan metabolism
(R-HSA-3560782)
Diseases of glycosylation
(R-HSA-3781865)
Diseases of metabolism
(R-HSA-5668914)
Early sars-cov-2 infection events
(R-HSA-9772572)
Extracellular matrix organization
(R-HSA-1474244)
Glycosaminoglycan metabolism
(R-HSA-1630316)
Hemostasis
(R-HSA-109582)
Heparan sulfate/heparin (hs-gag) metabolism
(R-HSA-1638091)
Hs-gag biosynthesis
(R-HSA-2022928)
Hs-gag degradation
(R-HSA-2024096)
Infectious disease
(R-HSA-5663205)
Metabolism
(R-HSA-1430728)
Metabolism of carbohydrates
(R-HSA-71387)
Metabolism of fat-soluble vitamins
(R-HSA-6806667)
Metabolism of vitamins and cofactors
(R-HSA-196854)
Non-integrin membrane-ecm interactions
(R-HSA-3000171)
Respiratory syncytial virus (rsv) attachment and entry
(R-HSA-9820960)
Respiratory syncytial virus infection pathway
(R-HSA-9820952)
Retinoid metabolism and transport
(R-HSA-975634)
Rsv-host interactions
(R-HSA-9833110)
Sars-cov-2 infection
(R-HSA-9694516)
Sars-cov infections
(R-HSA-9679506)
Sensory perception
(R-HSA-9709957)
Syndecan interactions
(R-HSA-3000170)
Viral infection pathways
(R-HSA-9824446)
Visual phototransduction
(R-HSA-2187338)
Cell migration
(GO:0016477)
Cell surface
(GO:0009986)
Collagen-containing extracellular matrix
(GO:0062023)
Golgi lumen
(GO:0005796)
Identical protein binding
(GO:0042802)
Lysosomal lumen
(GO:0043202)
Membrane
(GO:0016020)
Microspike
(GO:0044393)
Plasma membrane
(GO:0005886)
Protein binding
(GO:0005515)

Other Information

Proteins

Syndecan-3

Genular Protein ID: 508017737

Symbol: SDC3_HUMAN

Name: Syndecan-3

UniProtKB Accession Codes:

O75056 Q5T1Z6 Q5T1Z7 Q96CT3 Q96PR8

Database IDs:

Citations:

PubMed ID: 11527150

Title: Cloning and characterization of human syndecan-3.

PubMed ID: 11527150

DOI: 10.1002/jcb.1119

PubMed ID: 9455484

Title: Characterization of cDNA clones in size-fractionated cDNA libraries from human brain.

PubMed ID: 9455484

DOI: 10.1093/dnares/4.5.345

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9388509

Title: Phosphorylation of recombinant N-syndecan (syndecan 3) core protein.

PubMed ID: 9388509

DOI: 10.1006/bbrc.1997.7684

PubMed ID: 12407114

Title: Cloning and characterization of a new human UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase, designated pp-GalNAc-T13, that is specifically expressed in neurons and synthesizes GalNAc alpha-serine/threonine antigen.

PubMed ID: 12407114

DOI: 10.1074/jbc.m203094200

PubMed ID: 23395182

Title: The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics.

PubMed ID: 23395182

DOI: 10.1016/j.str.2013.01.004

Sequence Information:

Length: 442
Mass: 45497
Checksum: D4C284CBC36A92E2
Sequence:

MKPGPPHRAG AAHGAGAGAG AAAGPGARGL LLPPLLLLLL AGRAAGAQRW RSENFERPVD 
LEGSGDDDSF PDDELDDLYS GSGSGYFEQE SGIETAMRFS PDVALAVSTT PAVLPTTNIQ 
PVGTPFEELP SERPTLEPAT SPLVVTEVPE EPSQRATTVS TTMATTAATS TGDPTVATVP 
ATVATATPST PAAPPFTATT AVIRTTGVRR LLPLPLTTVA TARATTPEAP SPPTTAAVLD 
TEAPTPRLVS TATSRPRALP RPATTQEPDI PERSTLPLGT TAPGPTEVAQ TPTPETFLTT 
IRDEPEVPVS GGPSGDFELP EEETTQPDTA NEVVAVGGAA AKASSPPGTL PKGARPGPGL 
LDNAIDSGSS AAQLPQKSIL ERKEVLVAVI VGGVVGALFA AFLVTLLIYR MKKKDEGSYT 
LEEPKQASVT YQKPDKQEEF YA

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: SDC3

Associated with

Other Information

Cloning and characterization of human syndecan-3. PubMed ID: 11527150

Characterization of cDNA clones in size-fractionated cDNA libraries from human brain. PubMed ID: 9455484

The DNA sequence and biological annotation of human chromosome 1. PubMed ID: 16710414

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Phosphorylation of recombinant N-syndecan (syndecan 3) core protein. PubMed ID: 9388509

Cloning and characterization of a new human UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase, designated pp-GalNAc-T13, that is specifically expressed in neurons and synthesizes GalNAc alpha-serine/threonine antigen. PubMed ID: 12407114

The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics. PubMed ID: 23395182