Details for: CDK11B

Gene ID: 984

Gene Type:  Protein-coding  - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.

Symbol: CDK11B

Ensembl ID: ENSG00000248333

Description: cyclin dependent kinase 11B

Cell Significance Landscape

Associated with

Significant Cells

Cell Significance Index (CSI) scores for the chosen context(s)

  • helper T cell CL0000912
    CSI 5.81
    rCSI 8.21%
    PRS 47.8
  • fallopian tube secretory epithelial cell CL4030006
    CSI 5.49
    rCSI 5.28%
    PRS 38.83
  • double-positive, alpha-beta thymocyte CL0000809
    CSI 5.22
    rCSI 5.32%
    PRS 50.45
  • effector CD8-positive, alpha-beta T cell CL0001050
    CSI 4.33
    rCSI 3.29%
    PRS 48.57
  • mature alpha-beta T cell CL0000791
    CSI 4.21
    rCSI 15.24%
    PRS 56.83
  • enteric smooth muscle cell CL0002504
    CSI 3.77
    rCSI 5.38%
    PRS 40.92
  • group 3 innate lymphoid cell CL0001071
    CSI 3.45
    rCSI 2.59%
    PRS 41.1
  • unswitched memory B cell CL0000970
    CSI 3.4
    rCSI 2.86%
    PRS 55.04
  • double negative thymocyte CL0002489
    CSI 3.25
    rCSI 2.26%
    PRS 45.88
  • neural crest cell CL0011012
    CSI 3.24
    rCSI 2.56%
    PRS 27.42
  • intermediate monocyte CL0002393
    CSI 3.21
    rCSI 4.85%
    PRS 39.69
  • CD4-positive, alpha-beta cytotoxic T cell CL0000934
    CSI 2.83
    rCSI 3.89%
    PRS 58.89
  • central memory CD8-positive, alpha-beta T cell CL0000907
    CSI 2.79
    rCSI 1.88%
    PRS 47.36
  • CD4-positive, alpha-beta thymocyte CL0000810
    CSI 2.73
    rCSI 2.18%
    PRS 59.4
  • CD8-positive, alpha-beta memory T cell CL0000909
    CSI 2.64
    rCSI 2.75%
    PRS 69.98
  • plasmacytoid dendritic cell, human CL0001058
    CSI 2.56
    rCSI 1.79%
    PRS 39.98
  • mature T cell CL0002419
    CSI 2.55
    rCSI 1.98%
    PRS 53.79
  • CD4-positive, CD25-positive, alpha-beta regulatory T cell CL0000792
    CSI 2.52
    rCSI 2.48%
    PRS 53.02
  • CD8-positive, alpha-beta thymocyte CL0000811
    CSI 2.5
    rCSI 3.9%
    PRS 65.48
  • precursor B cell CL0000817
    CSI 2.44
    rCSI 2.14%
    PRS 47.56
  • transit amplifying cell CL0009010
    CSI 2.42
    rCSI 3.69%
    PRS 54.46
  • BEST4+ enteroycte CL4030026
    CSI 2.41
    rCSI 3%
    PRS 40.67
  • ciliated cell CL0000064
    CSI 2.41
    rCSI 3.9%
    PRS 37.18
  • duct epithelial cell CL0000068
    CSI 2.37
    rCSI 3.47%
    PRS 40.88
  • forebrain radial glial cell CL0013000
    CSI 2.34
    rCSI 7.51%
    PRS 46.49
  • lung neuroendocrine cell CL1000223
    CSI 2.33
    rCSI 3.45%
    PRS 42.63
  • naive T cell CL0000898
    CSI 2.31
    rCSI 1.61%
    PRS 50.31
  • retinal bipolar neuron CL0000748
    CSI 2.3
    rCSI 4.31%
    PRS 29.36
  • interstitial cell of Cajal CL0002088
    CSI 2.28
    rCSI 2.9%
    PRS 43.11
  • ionocyte CL0005006
    CSI 2.27
    rCSI 2.43%
    PRS 36.09
  • CD1c-positive myeloid dendritic cell CL0002399
    CSI 2.22
    rCSI 2.68%
    PRS 44.93
  • intestinal tuft cell CL0019032
    CSI 2.21
    rCSI 3.37%
    PRS 42.58
  • immature B cell CL0000816
    CSI 2.19
    rCSI 1.63%
    PRS 50.83
  • fibroblast of lung CL0002553
    CSI 2.19
    rCSI 2.04%
    PRS 38.02
  • CD4-positive, alpha-beta memory T cell CL0000897
    CSI 2.15
    rCSI 1.54%
    PRS 50.2
  • promyelocyte CL0000836
    CSI 2.08
    rCSI 3%
    PRS 48.21
  • Kupffer cell CL0000091
    CSI 2.05
    rCSI 4.68%
    PRS 37.7
  • goblet cell CL0000160
    CSI 2.03
    rCSI 1.92%
    PRS 39.3
  • plasmablast CL0000980
    CSI 2.03
    rCSI 1.59%
    PRS 44.21
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 2.02
    rCSI 1.19%
    PRS 51.84
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 2.01
    rCSI 3.44%
    PRS 59.21
  • epithelial cell of lower respiratory tract CL0002632
    CSI 1.99
    rCSI 1.55%
    PRS 38.18
  • T follicular helper cell CL0002038
    CSI 1.98
    rCSI 1.48%
    PRS 52.46
  • memory T cell CL0000813
    CSI 1.94
    rCSI 3.74%
    PRS 68.09
  • foveolar cell of stomach CL0002179
    CSI 1.93
    rCSI 4.12%
    PRS 53.29
  • rod bipolar cell CL0000751
    CSI 1.91
    rCSI 3.43%
    PRS 32.44
  • hematopoietic stem cell CL0000037
    CSI 1.9
    rCSI 1.26%
    PRS 42.32
  • secretory cell CL0000151
    CSI 1.89
    rCSI 1.98%
    PRS 38.83
  • elicited macrophage CL0000861
    CSI 1.89
    rCSI 1.74%
    PRS 44.87
  • interneuron CL0000099
    CSI 1.89
    rCSI 3.79%
    PRS 29.37
  • CD4-positive helper T cell CL0000492
    CSI 1.86
    rCSI 1.41%
    PRS 49.74
  • activated type II NK T cell CL0000931
    CSI 1.83
    rCSI 2.06%
    PRS 54.06
  • class switched memory B cell CL0000972
    CSI 1.83
    rCSI 1.36%
    PRS 56.45
  • colonocyte CL1000347
    CSI 1.81
    rCSI 2.6%
    PRS 46.04
  • pulmonary capillary endothelial cell CL4028001
    CSI 1.81
    rCSI 3.45%
    PRS 54.73
  • renal alpha-intercalated cell CL0005011
    CSI 1.79
    rCSI 2.4%
    PRS 46.09
  • respiratory hillock cell CL4030023
    CSI 1.79
    rCSI 3.19%
    PRS 54.25
  • perivascular cell CL4033054
    CSI 1.77
    rCSI 2.41%
    PRS 42.66
  • intestinal epithelial cell CL0002563
    CSI 1.75
    rCSI 1.83%
    PRS 38.13
  • ciliated epithelial cell CL0000067
    CSI 1.71
    rCSI 1.51%
    PRS 28.77
  • intestine goblet cell CL0019031
    CSI 1.71
    rCSI 1.52%
    PRS 37.6
  • vascular leptomeningeal cell CL4023051
    CSI 1.63
    rCSI 2.86%
    PRS 31.43
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 1.58
    rCSI 6.14%
    PRS 57.7
  • blood vessel endothelial cell CL0000071
    CSI 1.57
    rCSI 3.26%
    PRS 36.75
  • cerebral cortex endothelial cell CL1001602
    CSI 1.57
    rCSI 2.71%
    PRS 30.09
  • alpha-beta T cell CL0000789
    CSI 1.56
    rCSI 1.83%
    PRS 52.6
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.55
    rCSI 4.02%
    PRS 34.96
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 1.53
    rCSI 1.4%
    PRS 52.78
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 1.53
    rCSI 3.05%
    PRS 56.05
  • retina horizontal cell CL0000745
    CSI 1.53
    rCSI 2.33%
    PRS 35.34
  • placental villous trophoblast CL2000060
    CSI 1.51
    rCSI 2.33%
    PRS 36.4
  • pro-B cell CL0000826
    CSI 1.49
    rCSI 1.23%
    PRS 39.01
  • lung pericyte CL0009089
    CSI 1.49
    rCSI 3.93%
    PRS 44.93
  • alveolar macrophage CL0000583
    CSI 1.48
    rCSI 2.43%
    PRS 43.15
  • promonocyte CL0000559
    CSI 1.48
    rCSI 2.53%
    PRS 47.48
  • lung ciliated cell CL1000271
    CSI 1.44
    rCSI 1.67%
    PRS 29.48
  • common dendritic progenitor CL0001029
    CSI 1.44
    rCSI 1.8%
    PRS 47.29
  • Mueller cell CL0000636
    CSI 1.43
    rCSI 3.27%
    PRS 32.8
  • Langerhans cell CL0000453
    CSI 1.43
    rCSI 2.18%
    PRS 55.81
  • CD14-positive monocyte CL0001054
    CSI 1.42
    rCSI 1.77%
    PRS 49.25
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.41
    rCSI 1.69%
    PRS 24.63
  • basal cell CL0000646
    CSI 1.4
    rCSI 1.87%
    PRS 39.98
  • respiratory basal cell CL0002633
    CSI 1.39
    rCSI 1.44%
    PRS 43.62
  • cardiac endothelial cell CL0010008
    CSI 1.39
    rCSI 5.61%
    PRS 36.92
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.37
    rCSI 4.05%
    PRS 42.5
  • mature B cell CL0000785
    CSI 1.36
    rCSI 1.18%
    PRS 46.64
  • colon epithelial cell CL0011108
    CSI 1.35
    rCSI 1.42%
    PRS 35.82
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 1.35
    rCSI 1.61%
    PRS 57.86
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.34
    rCSI 1.67%
    PRS 23.37
  • colon goblet cell CL0009039
    CSI 1.33
    rCSI 3.17%
    PRS 50.7
  • renal interstitial pericyte CL1001318
    CSI 1.33
    rCSI 3.68%
    PRS 35.6
  • myeloid leukocyte CL0000766
    CSI 1.32
    rCSI 1.22%
    PRS 39.32
  • muscle cell CL0000187
    CSI 1.31
    rCSI 2.7%
    PRS 60.94
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 1.3
    rCSI 1.17%
    PRS 35.15
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.3
    rCSI 2.91%
    PRS 25.22
  • granulocyte CL0000094
    CSI 1.28
    rCSI 1.96%
    PRS 46.92
  • transit amplifying cell of colon CL0009011
    CSI 1.25
    rCSI 1.47%
    PRS 42.07
  • chondrocyte CL0000138
    CSI 1.19
    rCSI 1.89%
    PRS 32.42
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 1.16
    rCSI 3.33%
    PRS 54.52
  • multi-ciliated epithelial cell CL0005012
    CSI 1.15
    rCSI 1.15%
    PRS 33.04
  • erythroid progenitor cell CL0000038
    CSI 0.3
    rCSI 1.7%
    PRS 49.3%
  • L5 extratelencephalic projecting glutamatergic cortical neuron CL4023041
    CSI 0.4
    rCSI 1.4%
    PRS 23.7%
  • ciliated columnar cell of tracheobronchial tree CL0002145
    CSI 0.5
    rCSI 1.1%
    PRS 37.3%
  • microcirculation associated smooth muscle cell CL0008035
    CSI 0.5
    rCSI 1.4%
    PRS 40.9%
  • effector memory CD8-positive, alpha-beta T cell, terminally differentiated CL0001062
    CSI 0.5
    rCSI 2.4%
    PRS 48.5%
  • large pre-B-II cell CL0000957
    CSI 0.5
    rCSI 1.5%
    PRS 53.3%
  • primitive red blood cell CL0002355
    CSI 0.5
    rCSI 2.9%
    PRS 53.4%
  • granulocyte monocyte progenitor cell CL0000557
    CSI 0.6
    rCSI 0.5%
    PRS 42.0%
  • retinal ganglion cell CL0000740
    CSI 0.6
    rCSI 1.3%
    PRS 28.3%
  • near-projecting glutamatergic cortical neuron CL4023012
    CSI 0.6
    rCSI 2.2%
    PRS 25.6%
  • transit amplifying cell of small intestine CL0009012
    CSI 0.6
    rCSI 2.6%
    PRS 58.0%
  • paneth cell of epithelium of small intestine CL1000343
    CSI 0.6
    rCSI 1.7%
    PRS 53.0%
  • L6b glutamatergic cortical neuron CL4023038
    CSI 0.6
    rCSI 2.0%
    PRS 25.7%
  • L2/3-6 intratelencephalic projecting glutamatergic neuron CL4023040
    CSI 0.7
    rCSI 1.6%
    PRS 24.0%
  • retinal cone cell CL0000573
    CSI 0.7
    rCSI 1.1%
    PRS 30.2%
  • podocyte CL0000653
    CSI 0.7
    rCSI 3.2%
    PRS 36.9%
  • intestinal crypt stem cell of small intestine CL0009017
    CSI 0.7
    rCSI 1.9%
    PRS 46.9%
  • IgG plasma cell CL0000985
    CSI 0.8
    rCSI 1.0%
    PRS 56.9%
  • hepatocyte CL0000182
    CSI 0.8
    rCSI 1.4%
    PRS 36.6%
  • T-helper 17 cell CL0000899
    CSI 0.8
    rCSI 0.7%
    PRS 59.7%
  • pulmonary artery endothelial cell CL1001568
    CSI 0.9
    rCSI 1.2%
    PRS 50.9%
  • neural progenitor cell CL0011020
    CSI 0.9
    rCSI 3.9%
    PRS 33.0%
  • sst GABAergic cortical interneuron CL4023017
    CSI 0.9
    rCSI 1.2%
    PRS 25.5%
  • lung macrophage CL1001603
    CSI 1.0
    rCSI 2.2%
    PRS 44.2%
  • CD14-low, CD16-positive monocyte CL0002396
    CSI 1.0
    rCSI 0.8%
    PRS 36.7%
  • retinal blood vessel endothelial cell CL0002585
    CSI 1.0
    rCSI 1.7%
    PRS 41.4%
  • common myeloid progenitor CL0000049
    CSI 1.1
    rCSI 0.9%
    PRS 38.7%
  • kidney connecting tubule epithelial cell CL1000768
    CSI 1.1
    rCSI 2.8%
    PRS 30.1%
  • small intestine goblet cell CL1000495
    CSI 1.1
    rCSI 2.4%
    PRS 47.9%
  • peripheral nervous system neuron CL2000032
    CSI 1.1
    rCSI 1.5%
    PRS 32.9%
  • vascular associated smooth muscle cell CL0000359
    CSI 1.1
    rCSI 3.7%
    PRS 41.8%
  • multi-ciliated epithelial cell CL0005012
    CSI 1.2
    rCSI 1.2%
    PRS 33.0%
  • effector CD4-positive, alpha-beta T cell CL0001044
    CSI 1.2
    rCSI 3.3%
    PRS 54.5%
  • chondrocyte CL0000138
    CSI 1.2
    rCSI 1.9%
    PRS 32.4%
  • transit amplifying cell of colon CL0009011
    CSI 1.3
    rCSI 1.5%
    PRS 42.1%
  • granulocyte CL0000094
    CSI 1.3
    rCSI 2.0%
    PRS 46.9%
  • astrocyte of the cerebral cortex CL0002605
    CSI 1.3
    rCSI 2.9%
    PRS 25.2%
  • megakaryocyte-erythroid progenitor cell CL0000050
    CSI 1.3
    rCSI 1.2%
    PRS 35.2%
  • muscle cell CL0000187
    CSI 1.3
    rCSI 2.7%
    PRS 60.9%
  • myeloid leukocyte CL0000766
    CSI 1.3
    rCSI 1.2%
    PRS 39.3%
  • renal interstitial pericyte CL1001318
    CSI 1.3
    rCSI 3.7%
    PRS 35.6%
  • colon goblet cell CL0009039
    CSI 1.3
    rCSI 3.2%
    PRS 50.7%
  • pvalb GABAergic cortical interneuron CL4023018
    CSI 1.3
    rCSI 1.7%
    PRS 23.4%
  • CD8-positive, alpha-beta cytotoxic T cell CL0000794
    CSI 1.4
    rCSI 1.6%
    PRS 57.9%
  • colon epithelial cell CL0011108
    CSI 1.4
    rCSI 1.4%
    PRS 35.8%
  • mature B cell CL0000785
    CSI 1.4
    rCSI 1.2%
    PRS 46.6%
  • cerebral cortex GABAergic interneuron CL0010011
    CSI 1.4
    rCSI 4.1%
    PRS 42.5%
  • cardiac endothelial cell CL0010008
    CSI 1.4
    rCSI 5.6%
    PRS 36.9%
  • respiratory basal cell CL0002633
    CSI 1.4
    rCSI 1.4%
    PRS 43.6%
  • basal cell CL0000646
    CSI 1.4
    rCSI 1.9%
    PRS 40.0%
  • VIP GABAergic cortical interneuron CL4023016
    CSI 1.4
    rCSI 1.7%
    PRS 24.6%
  • CD14-positive monocyte CL0001054
    CSI 1.4
    rCSI 1.8%
    PRS 49.3%
  • Langerhans cell CL0000453
    CSI 1.4
    rCSI 2.2%
    PRS 55.8%
  • Mueller cell CL0000636
    CSI 1.4
    rCSI 3.3%
    PRS 32.8%
  • common dendritic progenitor CL0001029
    CSI 1.4
    rCSI 1.8%
    PRS 47.3%
  • lung ciliated cell CL1000271
    CSI 1.4
    rCSI 1.7%
    PRS 29.5%
  • promonocyte CL0000559
    CSI 1.5
    rCSI 2.5%
    PRS 47.5%
  • alveolar macrophage CL0000583
    CSI 1.5
    rCSI 2.4%
    PRS 43.2%
  • lung pericyte CL0009089
    CSI 1.5
    rCSI 3.9%
    PRS 44.9%
  • pro-B cell CL0000826
    CSI 1.5
    rCSI 1.2%
    PRS 39.0%
  • placental villous trophoblast CL2000060
    CSI 1.5
    rCSI 2.3%
    PRS 36.4%
  • retina horizontal cell CL0000745
    CSI 1.5
    rCSI 2.3%
    PRS 35.3%
  • CD8-positive, CD28-negative, alpha-beta regulatory T cell CL0000920
    CSI 1.5
    rCSI 3.1%
    PRS 56.1%
  • effector memory CD8-positive, alpha-beta T cell CL0000913
    CSI 1.5
    rCSI 1.4%
    PRS 52.8%
  • kidney loop of Henle thin ascending limb epithelial cell CL1001107
    CSI 1.6
    rCSI 4.0%
    PRS 35.0%
  • alpha-beta T cell CL0000789
    CSI 1.6
    rCSI 1.8%
    PRS 52.6%
  • cerebral cortex endothelial cell CL1001602
    CSI 1.6
    rCSI 2.7%
    PRS 30.1%
  • blood vessel endothelial cell CL0000071
    CSI 1.6
    rCSI 3.3%
    PRS 36.8%
  • lymphoid lineage restricted progenitor cell CL0000838
    CSI 1.6
    rCSI 6.1%
    PRS 57.7%
  • vascular leptomeningeal cell CL4023051
    CSI 1.6
    rCSI 2.9%
    PRS 31.4%
  • intestine goblet cell CL0019031
    CSI 1.7
    rCSI 1.5%
    PRS 37.6%
  • ciliated epithelial cell CL0000067
    CSI 1.7
    rCSI 1.5%
    PRS 28.8%
  • intestinal epithelial cell CL0002563
    CSI 1.8
    rCSI 1.8%
    PRS 38.1%
  • perivascular cell CL4033054
    CSI 1.8
    rCSI 2.4%
    PRS 42.7%
  • respiratory hillock cell CL4030023
    CSI 1.8
    rCSI 3.2%
    PRS 54.3%
  • renal alpha-intercalated cell CL0005011
    CSI 1.8
    rCSI 2.4%
    PRS 46.1%
  • pulmonary capillary endothelial cell CL4028001
    CSI 1.8
    rCSI 3.5%
    PRS 54.7%
  • colonocyte CL1000347
    CSI 1.8
    rCSI 2.6%
    PRS 46.0%
  • class switched memory B cell CL0000972
    CSI 1.8
    rCSI 1.4%
    PRS 56.5%
  • activated type II NK T cell CL0000931
    CSI 1.8
    rCSI 2.1%
    PRS 54.1%
  • CD4-positive helper T cell CL0000492
    CSI 1.9
    rCSI 1.4%
    PRS 49.7%
  • interneuron CL0000099
    CSI 1.9
    rCSI 3.8%
    PRS 29.4%
  • elicited macrophage CL0000861
    CSI 1.9
    rCSI 1.7%
    PRS 44.9%
  • secretory cell CL0000151
    CSI 1.9
    rCSI 2.0%
    PRS 38.8%
  • hematopoietic stem cell CL0000037
    CSI 1.9
    rCSI 1.3%
    PRS 42.3%
  • rod bipolar cell CL0000751
    CSI 1.9
    rCSI 3.4%
    PRS 32.4%
  • foveolar cell of stomach CL0002179
    CSI 1.9
    rCSI 4.1%
    PRS 53.3%
  • memory T cell CL0000813
    CSI 1.9
    rCSI 3.7%
    PRS 68.1%
  • T follicular helper cell CL0002038
    CSI 2.0
    rCSI 1.5%
    PRS 52.5%
  • epithelial cell of lower respiratory tract CL0002632
    CSI 2.0
    rCSI 1.6%
    PRS 38.2%
  • activated CD8-positive, alpha-beta T cell, human CL0001049
    CSI 2.0
    rCSI 3.4%
    PRS 59.2%
  • central memory CD4-positive, alpha-beta T cell CL0000904
    CSI 2.0
    rCSI 1.2%
    PRS 51.8%
  • plasmablast CL0000980
    CSI 2.0
    rCSI 1.6%
    PRS 44.2%
  • goblet cell CL0000160
    CSI 2.0
    rCSI 1.9%
    PRS 39.3%
  • Kupffer cell CL0000091
    CSI 2.1
    rCSI 4.7%
    PRS 37.7%
  • promyelocyte CL0000836
    CSI 2.1
    rCSI 3.0%
    PRS 48.2%
  • CD4-positive, alpha-beta memory T cell CL0000897
    CSI 2.2
    rCSI 1.5%
    PRS 50.2%
  • fibroblast of lung CL0002553
    CSI 2.2
    rCSI 2.0%
    PRS 38.0%
  • immature B cell CL0000816
    CSI 2.2
    rCSI 1.6%
    PRS 50.8%
  • intestinal tuft cell CL0019032
    CSI 2.2
    rCSI 3.4%
    PRS 42.6%

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration

Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.

Comma-separated if multiple.
Comma-separated if multiple.

Legend:
  • Query Gene
  • Node Color (Target Cell CSI, relative to current network):
    • Very High
    • High
    • Medium
    • Low
    • Very Low
    • CSI N/A
  • Node Size: Proportional to Target Cell CSI magnitude
  • STRING PPI Edge
  • Shared Pathway Edge (ONTOLOGY)

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Other Information

This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.

## Summary [CDK11B](/details-gene/984) is a protein-coding gene located on chromosome 1p36.33 that encodes Cyclin-dependent kinase 11B, a member of the serine/threonine protein kinase family. This kinase is a crucial regulator of fundamental cellular processes, with established roles in the '[mitotic cell cycle](/details-pathway/GO:0000278)', '[regulation of dna-templated transcription](/details-pathway/GO:0006355)', and the '[apoptotic process](/details-pathway/GO:0006915)'. **Overall** expression data highlight its significance in a diverse array of highly proliferative and metabolically active cells. It is particularly prominent in the immune system, showing high significance in various T cell subsets such as [helper T cell](/details-cell/CL0000912)s and developing [double-positive, alpha-beta thymocyte](/details-cell/CL0000809)s, as well as in non-immune cell types like [fallopian tube secretory epithelial cell](/details-cell/CL4030006)s, suggesting a widespread role in maintaining cellular function and division. ## Cellular Roles and Expression Landscape The expression profile of [CDK11B](/details-gene/984) indicates a key function in cells characterized by active division, differentiation, and high metabolic turnover. A predominant theme is its importance in the adaptive immune system, particularly in T lymphocyte biology. The gene shows high significance across the entire T cell developmental spectrum, from early progenitors like [double negative thymocyte](/details-cell/CL0002489)s (CSI: 3.25) and [double-positive, alpha-beta thymocyte](/details-cell/CL0000809)s (CSI: 5.22) within the thymus, to mature peripheral subsets including [helper T cell](/details-cell/CL0000912)s (CSI: 5.81) and [effector CD8-positive, alpha-beta T cell](/details-cell/CL0001050)s (CSI: 4.33). Its notable significance in other lymphocyte populations, such as [group 3 innate lymphoid cell](/details-cell/CL0001071)s and [unswitched memory B cell](/details-cell/CL0000970)s, further reinforces its broad role in lymphocyte proliferation and function. Beyond the hematopoietic system, [CDK11B](/details-gene/984) is also highly significant in specific non-immune cell populations. Its strong signal in [fallopian tube secretory epithelial cell](/details-cell/CL4030006)s (CSI: 5.49) and [enteric smooth muscle cell](/details-cell/CL0002504)s (CSI: 3.77) suggests that its functions in cell cycle control and transcriptional regulation are integral to tissues with high secretory activity or contractile function. This diverse expression pattern suggests that [CDK11B](/details-gene/984) is a pleiotropic kinase whose activity is harnessed by distinct cell types to manage proliferation, differentiation, and specialized cellular tasks. ## Pathways and Molecular Function The annotated molecular functions of [CDK11B](/details-gene/984) are centered on its identity as a protein kinase. It exhibits '[cyclin-dependent protein serine/threonine kinase activity](/details-pathway/GO:0004693)' and '[ATP binding](/details-pathway/GO:0005524)' capacity, operating within the '[cyclin-dependent protein kinase holoenzyme complex](/details-pathway/GO:0000307)' in both the '[nucleus](/details-pathway/GO:0005634)' and '[cytoplasm](/details-pathway/GO:0005737)'. These enzymatic activities are pivotal for its involvement in major cellular events. Its role in the '[Cell cycle](/details-pathway/R-HSA-1640170)', specifically during the '[G2/m transition](/details-pathway/R-HSA-69275)', is consistent with its high expression in rapidly dividing cell populations like thymocytes and activated T cells. Beyond cell cycle control, research indicates [CDK11B](/details-gene/984) plays a significant role in gene expression by contributing to '[regulation of mrna processing](/details-pathway/GO:0050684)' and '[regulation of rna splicing](/details-pathway/GO:0043484)', a function supported by studies demonstrating its ability to promote pre-mRNA splicing ([Link](https://doi.org/10.1074/jbc.m210057200)). Furthermore, its involvement in the '[regulation of apoptotic process](/details-pathway/GO:0042981)' suggests that [CDK11B](/details-gene/984) may act as a molecular arbiter, influencing cell fate decisions between proliferation, differentiation, and programmed cell death. ## Research Directions The widespread yet specific expression of [CDK11B](/details-gene/984) in both immune and non-immune cells raises important questions about its context-dependent functions and regulatory mechanisms. Based on the available data, several testable hypotheses can be proposed: 1. **Hypothesis 1:** The kinase activity of [CDK11B](/details-gene/984) is indispensable for traversing the G2/M checkpoint during the clonal expansion of T lymphocytes following antigen recognition. Consequently, its inhibition would result in cell cycle arrest and a compromised adaptive immune response. 2. **Hypothesis 2:** In functionally specialized, post-mitotic or slow-cycling cells such as [fallopian tube secretory epithelial cell](/details-cell/CL4030006)s, the primary role of [CDK11B](/details-gene/984) shifts from cell cycle regulation to the transcriptional and post-transcriptional control of genes encoding secreted proteins essential for tissue function. A compelling experimental approach to test Hypothesis 1 would involve a conditional knockout mouse model where `Cdk11b` is specifically deleted in the T cell lineage (e.g., using a CD4-Cre driver). T cells isolated from these knockout mice and their wild-type littermates could be stimulated *in vitro* with anti-CD3/CD28 antibodies. Subsequent analysis of cell proliferation via dye dilution assays, cell cycle profiling by flow cytometry, and quantification of effector cytokine production by ELISA would directly determine the necessity of [CDK11B](/details-gene/984) for a productive T cell immune response. From a therapeutic perspective, [CDK11B](/details-gene/984), as a kinase involved in cell proliferation, represents a plausible target for anti-cancer therapies, a possibility supported by its clinical annotation ([176873](https://omim.org/entry/176873)). The strategy would focus on **inhibition** using small molecules designed to block its kinase activity. However, its significant role in healthy, actively dividing tissues like the immune system suggests a narrow therapeutic window. Systemic inhibition could lead to significant on-target toxicities, including myelosuppression and impaired immunity, necessitating the development of highly targeted delivery strategies or combination therapies to be clinically viable.

Genular Protein ID: 1467043720

Symbol: CD11B_HUMAN

Name: Cyclin-dependent kinase 11B

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 2217177

Title: Increased expression of a 58-kDa protein kinase leads to changes in the CHO cell cycle.

PubMed ID: 2217177

DOI: 10.1073/pnas.87.19.7467

PubMed ID: 2006197

Title:

PubMed ID: 2006197

DOI: 10.1073/pnas.88.6.2612-e

PubMed ID: 1639388

Title: Structure and expression of the human p58clk-1 protein kinase chromosomal gene.

PubMed ID: 1639388

DOI: 10.1016/0888-7543(92)90132-c

PubMed ID: 8195233

Title: Molecular cloning and expression of alternatively spliced PITSLRE protein kinase isoforms.

PubMed ID: 8195233

DOI: 10.1016/s0021-9258(17)40749-6

PubMed ID: 9750192

Title: Duplication of a genomic region containing the Cdc2L1-2 and MMP21-22 genes on human chromosome 1p36.3 and their linkage to D1Z2.

PubMed ID: 9750192

DOI: 10.1101/gr.8.9.929

PubMed ID: 16710414

Title: The DNA sequence and biological annotation of human chromosome 1.

PubMed ID: 16710414

DOI: 10.1038/nature04727

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 9580558

Title: The RNP protein, RNPS1, associates with specific isoforms of the p34cdc2-related PITSLRE protein kinases in vivo.

PubMed ID: 9580558

DOI: 10.1242/jcs.111.11.1495

PubMed ID: 10882096

Title: Identification and characterization of a novel cell cycle-regulated internal ribosome entry site.

PubMed ID: 10882096

DOI: 10.1016/s1097-2765(00)80239-7

PubMed ID: 14511641

Title: The cyclin-dependent kinase 11(p46) isoform interacts with RanBPM.

PubMed ID: 14511641

DOI: 10.1016/j.bbrc.2003.08.116

PubMed ID: 12501247

Title: CDK11 complexes promote pre-mRNA splicing.

PubMed ID: 12501247

DOI: 10.1074/jbc.m210057200

PubMed ID: 12624090

Title: The C-terminal kinase domain of the p34cdc2-related PITSLRE protein kinase (p110C) associates with p21-activated kinase 1 and inhibits its activity during anoikis.

PubMed ID: 12624090

DOI: 10.1074/jbc.m300818200

PubMed ID: 15883043

Title: The cyclin-dependent kinase 11 interacts with 14-3-3 proteins.

PubMed ID: 15883043

DOI: 10.1016/j.bbrc.2005.04.078

PubMed ID: 17081983

Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.

PubMed ID: 17081983

DOI: 10.1016/j.cell.2006.09.026

PubMed ID: 16964243

Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PubMed ID: 16964243

DOI: 10.1038/nbt1240

PubMed ID: 16327805

Title: Dichotomous but stringent substrate selection by the dual-function Cdk7 complex revealed by chemical genetics.

PubMed ID: 16327805

DOI: 10.1038/nsmb1028

PubMed ID: 18216018

Title: Characterization of cyclin L1 and L2 interactions with CDK11 and splicing factors: influence of cyclin L isoforms on splice site selection.

PubMed ID: 18216018

DOI: 10.1074/jbc.m708188200

PubMed ID: 18220336

Title: Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis.

PubMed ID: 18220336

DOI: 10.1021/pr0705441

PubMed ID: 18669648

Title: A quantitative atlas of mitotic phosphorylation.

PubMed ID: 18669648

DOI: 10.1073/pnas.0805139105

PubMed ID: 19690332

Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.

PubMed ID: 19690332

DOI: 10.1126/scisignal.2000007

PubMed ID: 20068231

Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.

PubMed ID: 20068231

DOI: 10.1126/scisignal.2000475

PubMed ID: 21406692

Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.

PubMed ID: 21406692

DOI: 10.1126/scisignal.2001570

PubMed ID: 23186163

Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.

PubMed ID: 23186163

DOI: 10.1021/pr300630k

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 25965346

Title: SP-R210 (Myo18A) isoforms as intrinsic modulators of macrophage priming and activation.

PubMed ID: 25965346

DOI: 10.1371/journal.pone.0126576

PubMed ID: 28112733

Title: Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.

PubMed ID: 28112733

DOI: 10.1038/nsmb.3366

PubMed ID: 34696162

Title: HSV-1 ICP22 Is a Selective Viral Repressor of Cellular RNA Polymerase II-Mediated Transcription Elongation.

PubMed ID: 34696162

DOI: 10.3390/vaccines9101054

PubMed ID: 17344846

Title: Patterns of somatic mutation in human cancer genomes.

PubMed ID: 17344846

DOI: 10.1038/nature05610

Sequence Information:

  • Length: 795
  • Mass: 92620
  • Checksum: 8CCB0E688E66DF47
  • Sequence:
  • MGDEKDSWKV KTLDEILQEK KRRKEQEEKA EIKRLKNSDD RDSKRDSLEE GELRDHRMEI 
    TIRNSPYRRE DSMEDRGEED DSLAIKPPQQ MSRKEKAHHR KDEKRKEKRR HRSHSAEGGK 
    HARVKEKERE HERRKRHREE QDKARREWER QKRREMAREH SRRERDRLEQ LERKRERERK 
    MREQQKEQRE QKERERRAEE RRKEREARRE VSAHHRTMRE DYSDKVKASH WSRSPPRPPR 
    ERFELGDGRK PGEARPAPAQ KPAQLKEEKM EERDLLSDLQ DISDSERKTS SAESSSAESG 
    SGSEEEEEEE EEEEEEGSTS EESEEEEEEE EEEEEETGSN SEEASEQSAE EVSEEEMSED 
    EERENENHLL VVPESRFDRD SGESEEAEEE VGEGTPQSSA LTEGDYVPDS PALSPIELKQ 
    ELPKYLPALQ GCRSVEEFQC LNRIEEGTYG VVYRAKDKKT DEIVALKRLK MEKEKEGFPI 
    TSLREINTIL KAQHPNIVTV REIVVGSNMD KIYIVMNYVE HDLKSLMETM KQPFLPGEVK 
    TLMIQLLRGV KHLHDNWILH RDLKTSNLLL SHAGILKVGD FGLAREYGSP LKAYTPVVVT 
    LWYRAPELLL GAKEYSTAVD MWSVGCIFGE LLTQKPLFPG KSEIDQINKV FKDLGTPSEK 
    IWPGYSELPA VKKMTFSEHP YNNLRKRFGA LLSDQGFDLM NKFLTYFPGR RISAEDGLKH 
    EYFRETPLPI DPSMFPTWPA KSEQQRVKRG TSPRPPEGGL GYSQLGDDDL KETGFHLTTT 
    NQGASAAGPG FSLKF

Genular Protein ID: 2503595159

Symbol: B4DII1_HUMAN

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Sequence Information:

  • Length: 210
  • Mass: 25014
  • Checksum: 799B855A2F80FC75
  • Sequence:
  • MSQSDDRDSK RDSLEEGELR DHRMEITIRN SPYRREDSME DRGEEDDSLA IKPPQQMSRK 
    EKAHHRKDEK RKEKRRHRSH SAEGGKHARV KEKEREHERR KRHREEQDKA RREWERQKRR 
    EMAREHSRRE SVCTSPNDER GLQRQSESQP LESQPASAAA GAVRVGRRPE ASKRRENGRK 
    GPAVRLTGHQ RQREEDQLGR VLVSGIRLRF