Details Currently Unavailable
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AI-Generated Summary
Disclaimer: This summary is AI-generated based on limited data and may be speculative or contain inaccuracies. Detailed expression analysis for this entry is unavailable.
Raw Database JSON for Gene ID: 1538
{
"geneID": 1538,
"tax": {
"id": 9606,
"name": [
{
"name": "Homo sapiens Linnaeus 1758"
},
{
"name": "Homo sapiens",
"type": 0
},
{
"name": "human",
"type": 4
}
]
},
"accession": {
"gene": [
"AL354653.26"
]
},
"genePos": {
"start": 83861146,
"end": 83886698
},
"orientation": true,
"symbol": "CYLC1",
"created": {
"$date": {
"$numberLong": "1738333348747"
}
},
"crossReference": {
"enseGeneID": "ENSG00000183035",
"enseRnaID": [
"ENST00000621735.4"
],
"enseProtID": [
"ENSP00000480907.1"
]
},
"chrom": {
"loc": "Xq21.1"
},
"desc": "cylicin 1",
"geneType": 5,
"mim": [
{
"id": 300768,
"relation": 0
}
],
"ontology": [
{
"id": "GO:0005198",
"term": "structural molecule activity",
"pubMed": [
8354692
],
"cat": 0
},
{
"id": "GO:0005200",
"term": "structural constituent of cytoskeleton",
"cat": 0
},
{
"id": "GO:0005515",
"term": "protein binding",
"pubMed": [
38573307
],
"cat": 0
},
{
"id": "GO:0001675",
"term": "acrosome assembly",
"pubMed": [
38573307
],
"cat": 1
},
{
"id": "GO:0007010",
"term": "cytoskeleton organization",
"cat": 1
},
{
"id": "GO:0007283",
"term": "spermatogenesis",
"pubMed": [
38013430,
38573307
],
"cat": 1
},
{
"id": "GO:0007283",
"term": "spermatogenesis",
"pubMed": [
8354692
],
"cat": 1
},
{
"id": "GO:0005634",
"term": "nucleus",
"pubMed": [
21630459
],
"cat": 2
},
{
"id": "GO:0033150",
"term": "cytoskeletal calyx",
"pubMed": [
38573307
],
"cat": 2
},
{
"id": "GO:0043159",
"term": "acrosomal matrix",
"cat": 2
},
{
"id": "GO:0043159",
"term": "acrosomal matrix",
"pubMed": [
8354692
],
"cat": 2
},
{
"id": "GO:0043159",
"term": "acrosomal matrix",
"pubMed": [
38013430
],
"cat": 2
},
{
"id": "GO:0061827",
"term": "sperm head",
"pubMed": [
38013430,
38573307
],
"cat": 2
}
],
"protein": [
{
"symbol": "CYLC1_HUMAN",
"name": "Cylicin-1",
"accession": [
"P35663",
"A0AVQ8",
"Q5JQQ9"
],
"databaseIDs": {
"NCBI Taxonomy": [
"9606"
],
"EMBL": [
"AL627233",
"BC126461",
"Z22780"
],
"CCDS": [
"CCDS35341.1"
],
"PIR": [
"B40713"
],
"RefSeq": [
"NP_066941.1"
],
"AlphaFoldDB": [
"P35663"
],
"BioGRID": [
"107918"
],
"IntAct": [
"P35663"
],
"STRING": [
"9606.ENSP00000331556"
],
"CarbonylDB": [
"P35663"
],
"GlyGen": [
"P35663"
],
"iPTMnet": [
"P35663"
],
"PhosphoSitePlus": [
"P35663"
],
"BioMuta": [
"CYLC1"
],
"DMDM": [
"77416856"
],
"MassIVE": [
"P35663"
],
"PaxDb": [
"9606-ENSP00000331556"
],
"PeptideAtlas": [
"P35663"
],
"ProteomicsDB": [
"55129"
],
"Antibodypedia": [
"14277"
],
"DNASU": [
"1538"
],
"Ensembl": [
"ENST00000329312.5"
],
"KEGG": [
"hsa:1538"
],
"MANE-Select": [
"ENST00000329312.5"
],
"UCSC": [
"uc004eei.3"
],
"AGR": [
"HGNC:2582"
],
"CTD": [
"1538"
],
"DisGeNET": [
"1538"
],
"GeneCards": [
"CYLC1"
],
"HGNC": [
"HGNC:2582"
],
"HPA": [
"ENSG00000183035"
],
"MIM": [
"300768"
],
"neXtProt": [
"NX_P35663"
],
"OpenTargets": [
"ENSG00000183035"
],
"PharmGKB": [
"PA27082"
],
"VEuPathDB": [
"HostDB:ENSG00000183035"
],
"eggNOG": [
"ENOG502RFCV"
],
"GeneTree": [
"ENSGT00730000111075"
],
"HOGENOM": [
"CLU_480276_0_0_1"
],
"InParanoid": [
"P35663"
],
"OMA": [
"RQAPFRN"
],
"OrthoDB": [
"5267195at2759"
],
"PhylomeDB": [
"P35663"
],
"TreeFam": [
"TF337809"
],
"PathwayCommons": [
"P35663"
],
"SignaLink": [
"P35663"
],
"BioGRID-ORCS": [
"1538"
],
"ChiTaRS": [
"CYLC1"
],
"GenomeRNAi": [
"1538"
],
"Pharos": [
"P35663"
],
"PRO": [
"PR:P35663"
],
"Proteomes": [
"UP000005640"
],
"RNAct": [
"P35663"
],
"Bgee": [
"ENSG00000183035"
],
"ExpressionAtlas": [
"P35663"
],
"GO": [
"GO:0043159",
"GO:0033150",
"GO:0005634",
"GO:0005200",
"GO:0005198",
"GO:0030154",
"GO:0007283"
],
"InterPro": [
"IPR026189",
"IPR029354"
],
"PANTHER": [
"PTHR16742",
"PTHR16742:SF1"
],
"Pfam": [
"PF15241"
]
},
"citations": [
{
"title": "The DNA sequence of the human X chromosome.",
"pubmedID": "15772651",
"doi": "10.1038/nature03440"
},
{
"title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
"pubmedID": "15489334",
"doi": "10.1101/gr.2596504"
},
{
"title": "Molecular characterization of mammalian cylicin, a basic protein of the sperm head cytoskeleton.",
"pubmedID": "8354692",
"doi": "10.1083/jcb.122.5.1043"
}
],
"sequence": {
"length": 651,
"mass": 74242,
"checksum": "EF63B156ADE67B85",
"modified": {
"$date": {
"$numberLong": "1128988800000"
}
},
"version": 2,
"sequence": "MSLPRLLKVNIRTYDNSIPISESSRKSWNQKHFALTFPKPLQRGTNDKSRPLKSQITVTRHDKRKLEEGQKPAHKWIRHSFRKILQWPPIYTAAREQTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVPPSREKPPLPACEPSLPSPKVRRLCWCKMPPPPPKPRYAPLPEAPWIHKLL"
},
"existence": 0,
"relevance": 1,
"proteinID": 1878524596
},
{
"symbol": "Q6PEK4_HUMAN",
"accession": [
"Q6PEK4"
],
"databaseIDs": {
"NCBI Taxonomy": [
"9606"
],
"EMBL": [
"BC058019",
"AAH58019.1"
],
"RefSeq": [
"NP_066941.1"
],
"AlphaFoldDB": [
"Q6PEK4"
],
"PeptideAtlas": [
"Q6PEK4"
],
"DNASU": [
"1538"
],
"KEGG": [
"hsa:1538"
],
"CTD": [
"1538"
],
"DisGeNET": [
"1538"
],
"OrthoDB": [
"5267195at2759"
],
"BioGRID-ORCS": [
"1538"
],
"ChiTaRS": [
"CYLC1"
],
"GO": [
"GO:0005200"
],
"InterPro": [
"IPR026189",
"IPR029354"
],
"PANTHER": [
"PTHR16742",
"PTHR16742:SF1"
],
"Pfam": [
"PF15241",
"PF15241"
],
"SAM": [
"MobiDB-lite"
]
},
"citations": [
{
"title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
"pubmedID": "15489334",
"doi": "10.1101/gr.2596504"
}
],
"sequence": {
"length": 334,
"mass": 38696,
"checksum": "0C53A01D5B573503",
"modified": {
"$date": {
"$numberLong": "1088985600000"
}
},
"version": 1,
"sequence": "MSLPRLLKVNIRTYDNSIPISESSRKSWNQKHFALTFPKPLQRGTNDKSRPLKSQITVTRHDKRKLEEGQKPAHKWIRHSFRKILQWPPIYTAAREQTPFRHLYTSKTHLKKAEYKKSKDEKGGTPLKKDSKKKGGSYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKKKKKKK"
},
"existence": 1,
"relevance": 2,
"proteinID": 1223864819
},
{
"symbol": "A0A087WXC8_HUMAN",
"accession": [
"A0A087WXC8"
],
"databaseIDs": {
"NCBI Taxonomy": [
"9606"
],
"EMBL": [
"AL627233"
],
"RefSeq": [
"NP_001258609.1"
],
"AlphaFoldDB": [
"A0A087WXC8"
],
"Antibodypedia": [
"14277"
],
"DNASU": [
"1538"
],
"Ensembl": [
"ENST00000621735.4",
"ENSP00000480907.1"
],
"UCSC": [
"uc031tka.2"
],
"CTD": [
"1538"
],
"DisGeNET": [
"1538"
],
"HGNC": [
"HGNC:2582"
],
"VEuPathDB": [
"HostDB:ENSG00000183035"
],
"GeneTree": [
"ENSGT00730000111075"
],
"HOGENOM": [
"CLU_2793308_0_0_1"
],
"OrthoDB": [
"5267195at2759"
],
"BioGRID-ORCS": [
"1538"
],
"ChiTaRS": [
"CYLC1"
],
"Proteomes": [
"UP000005640",
"UP000005640"
],
"Bgee": [
"ENSG00000183035"
],
"ExpressionAtlas": [
"A0A087WXC8"
],
"GO": [
"GO:0005200"
],
"InterPro": [
"IPR026189",
"IPR029354"
],
"PANTHER": [
"PTHR16742",
"PTHR16742:SF1"
],
"Pfam": [
"PF15241",
"PF15241"
]
},
"citations": [
{
"title": "Initial sequencing and analysis of the human genome.",
"pubmedID": "11237011",
"doi": "10.1038/35057062"
},
{
"title": "Finishing the euchromatic sequence of the human genome.",
"pubmedID": "15496913",
"doi": "10.1038/nature03001"
},
{
"title": "The DNA sequence of the human X chromosome.",
"pubmedID": "15772651",
"doi": "10.1038/nature03440"
}
],
"sequence": {
"length": 68,
"mass": 7898,
"checksum": "A34A765F406BB615",
"modified": {
"$date": {
"$numberLong": "1414540800000"
}
},
"version": 1,
"sequence": "MSLPRLKVNIRTYDNSIPISESSRKSWNQKHFALTFPKPLQRGTNDKSRPLKSQITVTPEAPWIHKLL"
},
"existence": 3,
"relevance": 2,
"proteinID": 2134091627
}
],
"singleCellExpressions": {
"cellSignificanceIndex": []
}
}