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Array

Raw Database JSON for Gene ID: 6677

{
    "geneID": 6677,
    "tax": {
        "id": 9606,
        "name": [
            {
                "name": "Homo sapiens Linnaeus 1758"
            },
            {
                "name": "Homo sapiens",
                "type": 0
            },
            {
                "name": "human",
                "type": 4
            }
        ]
    },
    "accession": {
        "gene": [
            "AJ494724.1"
        ]
    },
    "symbol": "SPAM1",
    "created": {
        "$date": {
            "$numberLong": "1738333349188"
        }
    },
    "crossReference": {
        "enseGeneID": "ENSG00000106304",
        "enseRnaID": [
            "ENST00000460182.5"
        ],
        "enseProtID": [
            "ENSP00000417934.1"
        ]
    },
    "genePos": {
        "end": 123971414,
        "start": 123925241
    },
    "chrom": {
        "pos": "7",
        "type": 1,
        "loc": "7q31.32"
    },
    "desc": "sperm adhesion molecule 1",
    "geneType": 5,
    "mim": [
        {
            "id": 600930,
            "relation": 0
        }
    ],
    "ontology": [
        {
            "id": "R-HSA-1474165",
            "term": "Reproduction",
            "cat": 10
        },
        {
            "id": "R-HSA-1187000",
            "term": "Fertilization",
            "cat": 11
        },
        {
            "id": "R-HSA-2534343",
            "term": "Interaction With Cumulus Cells And The Zona Pellucida",
            "cat": 12
        },
        {
            "id": "GO:0004415",
            "term": "hyalurononglucosaminidase activity",
            "cat": 0
        },
        {
            "id": "GO:0005975",
            "term": "carbohydrate metabolic process",
            "cat": 1
        },
        {
            "id": "GO:0007155",
            "term": "cell adhesion",
            "cat": 1
        },
        {
            "id": "GO:0007339",
            "term": "binding of sperm to zona pellucida",
            "pubMed": [
                8195297
            ],
            "cat": 1
        },
        {
            "id": "GO:0007342",
            "term": "fusion of sperm to egg plasma membrane involved in single fertilization",
            "cat": 1
        },
        {
            "id": "GO:0030214",
            "term": "hyaluronan catabolic process",
            "cat": 1
        },
        {
            "id": "GO:0001669",
            "term": "acrosomal vesicle",
            "cat": 2
        },
        {
            "id": "GO:0005886",
            "term": "plasma membrane",
            "cat": 2
        },
        {
            "id": "GO:0098552",
            "term": "side of membrane",
            "cat": 2
        }
    ],
    "geneRelations": [
        {
            "type": 1,
            "similarGenes": [
                "105375483"
            ]
        }
    ],
    "protein": [
        {
            "symbol": "HYALP_HUMAN",
            "name": "Hyaluronidase PH-20",
            "accession": [
                "P38567",
                "Q8TC30"
            ],
            "databaseIDs": {
                "NCBI Taxonomy": [
                    "9606"
                ],
                "EC": [
                    "3.2.1.35",
                    "3.2.1.35"
                ],
                "EMBL": [
                    "L13781",
                    "S67798",
                    "X84347",
                    "AC004690",
                    "CH236947",
                    "CH471070",
                    "BC026163"
                ],
                "CCDS": [
                    "CCDS5790.1",
                    "CCDS5791.1"
                ],
                "PIR": [
                    "S40465"
                ],
                "RefSeq": [
                    "NP_001167515.1",
                    "NP_001167516.1",
                    "NP_001167517.1",
                    "NP_003108.2",
                    "NP_694859.1"
                ],
                "AlphaFoldDB": [
                    "P38567"
                ],
                "SMR": [
                    "P38567"
                ],
                "BioGRID": [
                    "112559"
                ],
                "STRING": [
                    "9606.ENSP00000345849"
                ],
                "DrugBank": [
                    "DB08818"
                ],
                "CAZy": [
                    "GH56"
                ],
                "GlyCosmos": [
                    "P38567"
                ],
                "GlyGen": [
                    "P38567"
                ],
                "iPTMnet": [
                    "P38567"
                ],
                "PhosphoSitePlus": [
                    "P38567"
                ],
                "BioMuta": [
                    "SPAM1"
                ],
                "DMDM": [
                    "585673"
                ],
                "MassIVE": [
                    "P38567"
                ],
                "PaxDb": [
                    "9606-ENSP00000345849"
                ],
                "PeptideAtlas": [
                    "P38567"
                ],
                "ProteomicsDB": [
                    "55298",
                    "55299"
                ],
                "Antibodypedia": [
                    "2991"
                ],
                "DNASU": [
                    "6677"
                ],
                "Ensembl": [
                    "ENST00000223028.11",
                    "ENST00000340011.9",
                    "ENST00000402183.3",
                    "ENST00000439500.5",
                    "ENST00000460182.5",
                    "ENST00000682466.1"
                ],
                "KEGG": [
                    "hsa:6677"
                ],
                "MANE-Select": [
                    "ENST00000682466.1"
                ],
                "UCSC": [
                    "uc003vle.4"
                ],
                "AGR": [
                    "HGNC:11217"
                ],
                "CTD": [
                    "6677"
                ],
                "DisGeNET": [
                    "6677"
                ],
                "GeneCards": [
                    "SPAM1"
                ],
                "HGNC": [
                    "HGNC:11217"
                ],
                "HPA": [
                    "ENSG00000106304"
                ],
                "MIM": [
                    "600930"
                ],
                "neXtProt": [
                    "NX_P38567"
                ],
                "OpenTargets": [
                    "ENSG00000106304"
                ],
                "PharmGKB": [
                    "PA36053"
                ],
                "VEuPathDB": [
                    "HostDB:ENSG00000106304"
                ],
                "eggNOG": [
                    "ENOG502R6HD"
                ],
                "GeneTree": [
                    "ENSGT01020000230364"
                ],
                "HOGENOM": [
                    "CLU_036366_0_1_1"
                ],
                "InParanoid": [
                    "P38567"
                ],
                "OMA": [
                    "RAKIVFE"
                ],
                "OrthoDB": [
                    "5344684at2759"
                ],
                "PhylomeDB": [
                    "P38567"
                ],
                "TreeFam": [
                    "TF321598"
                ],
                "BioCyc": [
                    "MetaCyc:HS02884-MONOMER"
                ],
                "BRENDA": [
                    "3.2.1.35"
                ],
                "PathwayCommons": [
                    "P38567"
                ],
                "Reactome": [
                    "R-HSA-2534343"
                ],
                "BioGRID-ORCS": [
                    "6677"
                ],
                "GeneWiki": [
                    "SPAM1"
                ],
                "GenomeRNAi": [
                    "6677"
                ],
                "Pharos": [
                    "P38567"
                ],
                "PRO": [
                    "PR:P38567"
                ],
                "Proteomes": [
                    "UP000005640"
                ],
                "RNAct": [
                    "P38567"
                ],
                "Bgee": [
                    "ENSG00000106304"
                ],
                "ExpressionAtlas": [
                    "P38567"
                ],
                "GO": [
                    "GO:0001669",
                    "GO:0005886",
                    "GO:0098552",
                    "GO:0004415",
                    "GO:0007339",
                    "GO:0005975",
                    "GO:0007155",
                    "GO:0007342",
                    "GO:0030214"
                ],
                "Gene3D": [
                    "3.20.20.70"
                ],
                "InterPro": [
                    "IPR013785",
                    "IPR017853",
                    "IPR018155",
                    "IPR001439"
                ],
                "PANTHER": [
                    "PTHR11769",
                    "PTHR11769:SF20"
                ],
                "Pfam": [
                    "PF01630"
                ],
                "PIRSF": [
                    "PIRSF038193",
                    "PIRSF500773"
                ],
                "PRINTS": [
                    "PR00846",
                    "PR00848"
                ],
                "SUPFAM": [
                    "SSF51445"
                ]
            },
            "citations": [
                {
                    "title": "Molecular cloning of the human and monkey sperm surface protein PH-20.",
                    "pubmedID": "8234258",
                    "doi": "10.1073/pnas.90.21.10071"
                },
                {
                    "title": "The human sperm protein PH-20 has hyaluronidase activity.",
                    "pubmedID": "8282124",
                    "doi": "10.1016/0014-5793(93)80873-s"
                },
                {
                    "title": "Expression analysis, genomic structure, and mapping to 7q31 of the human sperm adhesion molecule gene SPAM1.",
                    "pubmedID": "8575780",
                    "doi": "10.1006/geno.1995.9931"
                },
                {
                    "title": "The DNA sequence of human chromosome 7.",
                    "pubmedID": "12853948",
                    "doi": "10.1038/nature01782"
                },
                {
                    "title": "Human chromosome 7: DNA sequence and biology.",
                    "pubmedID": "12690205",
                    "doi": "10.1126/science.1083423"
                },
                {
                    "title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
                    "pubmedID": "15489334",
                    "doi": "10.1101/gr.2596504"
                },
                {
                    "title": "In vitro mutagenesis of PH-20 hyaluronidase from human sperm.",
                    "pubmedID": "9288901",
                    "doi": "10.1111/j.1432-1033.1997.t01-1-00810.x"
                },
                {
                    "title": "Exome sequencing identifies frequent mutation of the SWI/SNF complex gene PBRM1 in renal carcinoma.",
                    "pubmedID": "21248752",
                    "doi": "10.1038/nature09639"
                }
            ],
            "sequence": {
                "length": 509,
                "mass": 57848,
                "checksum": "5ADB4739747E32E8",
                "modified": {
                    "$date": {
                        "$numberLong": "780969600000"
                    }
                },
                "version": 1,
                "sequence": "MGVLKFKHIFFRSFVKSSGVSQIVFTFLLIPCCLTLNFRAPPVIPNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGASGIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMCSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVKDTDAVDVCIADGVCIDAFLKPPMETEEPQIFYNASPSTLSATMFIVSILFLIISSVASL"
            },
            "existence": 0,
            "relevance": 1,
            "proteinID": 2012818500
        }
    ],
    "singleCellExpressions": {
        "cellSignificanceIndex": []
    }
}