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AI-Generated Summary

Array

Raw Database JSON for Gene ID: 6758

{
    "geneID": 6758,
    "tax": {
        "id": 9606,
        "name": [
            {
                "name": "Homo sapiens Linnaeus 1758"
            },
            {
                "name": "Homo sapiens",
                "type": 0
            },
            {
                "name": "human",
                "type": 4
            }
        ]
    },
    "accession": {
        "gene": [
            "AC245047.1"
        ]
    },
    "genePos": {
        "start": 48186220,
        "end": 48196795
    },
    "orientation": true,
    "symbol": "SSX5",
    "created": {
        "$date": {
            "$numberLong": "1738333349190"
        }
    },
    "crossReference": {
        "enseGeneID": "ENSG00000165583",
        "enseRnaID": [
            "ENST00000311798.5"
        ],
        "enseProtID": [
            "ENSP00000312415.1"
        ]
    },
    "chrom": {
        "loc": "Xp11.23"
    },
    "desc": "SSX family member 5",
    "geneType": 5,
    "mim": [
        {
            "id": 300327,
            "relation": 0
        }
    ],
    "ontology": [
        {
            "id": "GO:0005515",
            "term": "protein binding",
            "pubMed": [
                25416956,
                29892012,
                31515488,
                32296183
            ],
            "cat": 0
        },
        {
            "id": "GO:0006355",
            "term": "regulation of DNA-templated transcription",
            "cat": 1
        },
        {
            "id": "GO:0005634",
            "term": "nucleus",
            "cat": 2
        }
    ],
    "geneRelations": [
        {
            "type": 8,
            "similarGenes": [
                "100287603"
            ]
        }
    ],
    "protein": [
        {
            "symbol": "SSX5_HUMAN",
            "name": "Protein SSX5",
            "accession": [
                "O60225",
                "Q5JQ59",
                "Q5JQ60",
                "Q96AW3"
            ],
            "databaseIDs": {
                "NCBI Taxonomy": [
                    "9606"
                ],
                "EMBL": [
                    "U90842",
                    "AL683817",
                    "AL356464",
                    "AL683817",
                    "AL356464",
                    "AL356464",
                    "AL683817",
                    "AL356464",
                    "AL683817",
                    "BC016640"
                ],
                "CCDS": [
                    "CCDS14288.1",
                    "CCDS14289.1"
                ],
                "RefSeq": [
                    "NP_066295.3",
                    "NP_783729.1",
                    "XP_011542251.1",
                    "XP_016885247.1"
                ],
                "AlphaFoldDB": [
                    "O60225"
                ],
                "BioGRID": [
                    "112636"
                ],
                "IntAct": [
                    "O60225"
                ],
                "STRING": [
                    "9606.ENSP00000312415"
                ],
                "iPTMnet": [
                    "O60225"
                ],
                "PhosphoSitePlus": [
                    "O60225"
                ],
                "BioMuta": [
                    "SSX5"
                ],
                "MassIVE": [
                    "O60225"
                ],
                "PeptideAtlas": [
                    "O60225"
                ],
                "ProteomicsDB": [
                    "49250",
                    "49251"
                ],
                "Antibodypedia": [
                    "25586"
                ],
                "DNASU": [
                    "6758"
                ],
                "Ensembl": [
                    "ENST00000311798.5",
                    "ENST00000347757.6"
                ],
                "KEGG": [
                    "hsa:6758"
                ],
                "MANE-Select": [
                    "ENST00000347757.6"
                ],
                "UCSC": [
                    "uc004diz.1"
                ],
                "AGR": [
                    "HGNC:11339"
                ],
                "CTD": [
                    "6758"
                ],
                "DisGeNET": [
                    "6758"
                ],
                "GeneCards": [
                    "SSX5"
                ],
                "HGNC": [
                    "HGNC:11339"
                ],
                "HPA": [
                    "ENSG00000165583"
                ],
                "MIM": [
                    "300327"
                ],
                "neXtProt": [
                    "NX_O60225"
                ],
                "OpenTargets": [
                    "ENSG00000165583"
                ],
                "PharmGKB": [
                    "PA36163"
                ],
                "VEuPathDB": [
                    "HostDB:ENSG00000165583"
                ],
                "GeneTree": [
                    "ENSGT00390000012484"
                ],
                "InParanoid": [
                    "O60225"
                ],
                "OMA": [
                    "EYQPLER"
                ],
                "OrthoDB": [
                    "4665403at2759"
                ],
                "PhylomeDB": [
                    "O60225"
                ],
                "TreeFam": [
                    "TF338517"
                ],
                "PathwayCommons": [
                    "O60225"
                ],
                "SignaLink": [
                    "O60225"
                ],
                "BioGRID-ORCS": [
                    "6758"
                ],
                "ChiTaRS": [
                    "SSX5"
                ],
                "GeneWiki": [
                    "SSX5"
                ],
                "GenomeRNAi": [
                    "6758"
                ],
                "Pharos": [
                    "O60225"
                ],
                "PRO": [
                    "PR:O60225"
                ],
                "Proteomes": [
                    "UP000005640"
                ],
                "RNAct": [
                    "O60225"
                ],
                "Bgee": [
                    "ENSG00000165583"
                ],
                "GO": [
                    "GO:0005634",
                    "GO:0006355"
                ],
                "InterPro": [
                    "IPR003655",
                    "IPR001909",
                    "IPR036051",
                    "IPR019041"
                ],
                "PANTHER": [
                    "PTHR14112:SF23",
                    "PTHR14112"
                ],
                "Pfam": [
                    "PF09514"
                ],
                "SMART": [
                    "SM00349"
                ],
                "SUPFAM": [
                    "SSF109640"
                ],
                "PROSITE": [
                    "PS50806"
                ]
            },
            "citations": [
                {
                    "title": "SSX: a multigene family with several members transcribed in normal testis and human cancer.",
                    "pubmedID": "9378559",
                    "doi": "10.1002/(sici)1097-0215(19970917)72:6<965::aid-ijc8>3.0.co;2-n"
                },
                {
                    "title": "The DNA sequence of the human X chromosome.",
                    "pubmedID": "15772651",
                    "doi": "10.1038/nature03440"
                },
                {
                    "title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
                    "pubmedID": "15489334",
                    "doi": "10.1101/gr.2596504"
                }
            ],
            "sequence": {
                "length": 188,
                "mass": 21660,
                "checksum": "DBFA61D8B1295A27",
                "modified": {
                    "$date": {
                        "$numberLong": "1159833600000"
                    }
                },
                "version": 3,
                "sequence": "MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE"
            },
            "existence": 0,
            "relevance": 1,
            "proteinID": 433729578
        }
    ],
    "singleCellExpressions": {
        "cellSignificanceIndex": []
    }
}