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AI-Generated Summary

Array

Raw Database JSON for Gene ID: 7576

{
    "geneID": 7576,
    "tax": {
        "id": 9606,
        "name": [
            {
                "name": "Homo sapiens Linnaeus 1758"
            },
            {
                "name": "Homo sapiens",
                "type": 0
            },
            {
                "name": "human",
                "type": 4
            }
        ]
    },
    "accession": {
        "gene": [
            "AC008813.6"
        ]
    },
    "genePos": {
        "start": 52797408,
        "end": 52821633
    },
    "orientation": true,
    "symbol": "ZNF28",
    "created": {
        "$date": {
            "$numberLong": "1738333349261"
        }
    },
    "crossReference": {
        "enseGeneID": "ENSG00000198538",
        "enseRnaID": [
            "ENST00000594602.5"
        ],
        "enseProtID": [
            "ENSP00000469381.1"
        ]
    },
    "chrom": {
        "pos": "19",
        "type": 1,
        "loc": "19q13.41"
    },
    "desc": "zinc finger protein 28",
    "geneType": 5,
    "ontology": [
        {
            "id": "R-HSA-74160",
            "term": "Gene expression (Transcription)",
            "cat": 10
        },
        {
            "id": "R-HSA-212165",
            "term": "Epigenetic regulation of gene expression",
            "cat": 11
        },
        {
            "id": "R-HSA-73857",
            "term": "RNA Polymerase II Transcription",
            "cat": 11
        },
        {
            "id": "R-HSA-212436",
            "term": "Generic Transcription Pathway",
            "cat": 12
        },
        {
            "id": "R-HSA-9842860",
            "term": "Regulation of endogenous retroelements",
            "cat": 12
        },
        {
            "id": "R-HSA-9843940",
            "term": "Regulation of endogenous retroelements by KRAB-ZFP proteins",
            "cat": 13
        },
        {
            "id": "GO:0000978",
            "term": "RNA polymerase II cis-regulatory region sequence-specific DNA binding",
            "cat": 0
        },
        {
            "id": "GO:0000981",
            "term": "DNA-binding transcription factor activity, RNA polymerase II-specific",
            "cat": 0
        },
        {
            "id": "GO:0046872",
            "term": "metal ion binding",
            "cat": 0
        },
        {
            "id": "GO:0006357",
            "term": "regulation of transcription by RNA polymerase II",
            "cat": 1
        },
        {
            "id": "GO:0005634",
            "term": "nucleus",
            "cat": 2
        }
    ],
    "geneRelations": [
        {
            "type": 8,
            "similarGenes": [
                "100131411"
            ]
        }
    ],
    "protein": [
        {
            "symbol": "ZNF28_HUMAN",
            "name": "Zinc finger protein 28",
            "accession": [
                "P17035",
                "A8KAK9",
                "B4E3G0",
                "B9EIK7",
                "Q5H9V1",
                "Q5HYM9",
                "Q6ZML9",
                "Q6ZN56"
            ],
            "databaseIDs": {
                "NCBI Taxonomy": [
                    "9606"
                ],
                "EMBL": [
                    "AK131368",
                    "AK131574",
                    "AK293074",
                    "AK304704",
                    "CR933598",
                    "BX640767",
                    "AC008813",
                    "BC140720",
                    "X52355"
                ],
                "CCDS": [
                    "CCDS33093.2",
                    "CCDS92676.1"
                ],
                "PIR": [
                    "I37964"
                ],
                "RefSeq": [
                    "NP_008900.3",
                    "XP_011525564.1"
                ],
                "AlphaFoldDB": [
                    "P17035"
                ],
                "SMR": [
                    "P17035"
                ],
                "BioGRID": [
                    "113406"
                ],
                "IntAct": [
                    "P17035"
                ],
                "STRING": [
                    "9606.ENSP00000397693"
                ],
                "GlyGen": [
                    "P17035"
                ],
                "iPTMnet": [
                    "P17035"
                ],
                "PhosphoSitePlus": [
                    "P17035"
                ],
                "BioMuta": [
                    "ZNF28"
                ],
                "DMDM": [
                    "313104321"
                ],
                "jPOST": [
                    "P17035"
                ],
                "MassIVE": [
                    "P17035"
                ],
                "PaxDb": [
                    "9606-ENSP00000397693"
                ],
                "PeptideAtlas": [
                    "P17035"
                ],
                "ProteomicsDB": [
                    "53436",
                    "53437"
                ],
                "Antibodypedia": [
                    "56951"
                ],
                "DNASU": [
                    "7576"
                ],
                "Ensembl": [
                    "ENST00000438150.2",
                    "ENST00000457749.7"
                ],
                "KEGG": [
                    "hsa:7576"
                ],
                "MANE-Select": [
                    "ENST00000457749.7"
                ],
                "UCSC": [
                    "uc002qad.4"
                ],
                "AGR": [
                    "HGNC:13073"
                ],
                "CTD": [
                    "7576"
                ],
                "GeneCards": [
                    "ZNF28"
                ],
                "HGNC": [
                    "HGNC:13073"
                ],
                "HPA": [
                    "ENSG00000198538"
                ],
                "MIM": [
                    "620466"
                ],
                "neXtProt": [
                    "NX_P17035"
                ],
                "OpenTargets": [
                    "ENSG00000198538"
                ],
                "PharmGKB": [
                    "PA37649"
                ],
                "VEuPathDB": [
                    "HostDB:ENSG00000198538"
                ],
                "eggNOG": [
                    "KOG1721"
                ],
                "GeneTree": [
                    "ENSGT00940000165246"
                ],
                "HOGENOM": [
                    "CLU_002678_17_1_1"
                ],
                "InParanoid": [
                    "P17035"
                ],
                "OMA": [
                    "ASQRICC"
                ],
                "OrthoDB": [
                    "4330832at2759"
                ],
                "PhylomeDB": [
                    "P17035"
                ],
                "TreeFam": [
                    "TF341892"
                ],
                "PathwayCommons": [
                    "P17035"
                ],
                "Reactome": [
                    "R-HSA-212436",
                    "R-HSA-9843940"
                ],
                "SignaLink": [
                    "P17035"
                ],
                "BioGRID-ORCS": [
                    "7576"
                ],
                "ChiTaRS": [
                    "ZNF28"
                ],
                "GenomeRNAi": [
                    "7576"
                ],
                "Pharos": [
                    "P17035"
                ],
                "PRO": [
                    "PR:P17035"
                ],
                "Proteomes": [
                    "UP000005640"
                ],
                "RNAct": [
                    "P17035"
                ],
                "Bgee": [
                    "ENSG00000198538"
                ],
                "ExpressionAtlas": [
                    "P17035"
                ],
                "GO": [
                    "GO:0005634",
                    "GO:0000981",
                    "GO:0046872",
                    "GO:0000978",
                    "GO:0006357"
                ],
                "CDD": [
                    "cd07765"
                ],
                "Gene3D": [
                    "6.10.140.140",
                    "3.30.160.60"
                ],
                "InterPro": [
                    "IPR001909",
                    "IPR036051",
                    "IPR050826",
                    "IPR036236",
                    "IPR013087"
                ],
                "PANTHER": [
                    "PTHR24377",
                    "PTHR24377:SF765"
                ],
                "Pfam": [
                    "PF01352",
                    "PF00096",
                    "PF13465"
                ],
                "SMART": [
                    "SM00349",
                    "SM00355"
                ],
                "SUPFAM": [
                    "SSF57667",
                    "SSF109640"
                ],
                "PROSITE": [
                    "PS50805",
                    "PS00028",
                    "PS50157"
                ]
            },
            "citations": [
                {
                    "title": "Complete sequencing and characterization of 21,243 full-length human cDNAs.",
                    "pubmedID": "14702039",
                    "doi": "10.1038/ng1285"
                },
                {
                    "title": "The full-ORF clone resource of the German cDNA consortium.",
                    "pubmedID": "17974005",
                    "doi": "10.1186/1471-2164-8-399"
                },
                {
                    "title": "The DNA sequence and biology of human chromosome 19.",
                    "pubmedID": "15057824",
                    "doi": "10.1038/nature02399"
                },
                {
                    "title": "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).",
                    "pubmedID": "15489334",
                    "doi": "10.1101/gr.2596504"
                },
                {
                    "title": "Multiple genes encoding zinc finger domains are expressed in human T cells.",
                    "pubmedID": "2288909"
                },
                {
                    "title": "Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation.",
                    "pubmedID": "28112733",
                    "doi": "10.1038/nsmb.3366"
                }
            ],
            "sequence": {
                "length": 718,
                "mass": 83658,
                "checksum": "CF602657CFEC8633",
                "modified": {
                    "$date": {
                        "$numberLong": "1291075200000"
                    }
                },
                "version": 5,
                "sequence": "MALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLDISSKCMMKTFFSTGQGNTEAFHTGTLQRQASHHIGDFCFQKIEKDIHGFQFQWKEDETNDHAAPMTEIKELTGSTGQHDQRHAGNKHIKDQLGLSFHSHLPELHIFQPEGKIGNQVEKSINNASSVSTSQRICCRPKTHISNKYGNNSLHSSLLTQKRNVHMREKSFQCIESGKSFNCSSLLKKHQITHLEEKQCKCDVYGKVFNQKRYLACHRRSHIDEKPYKCNECGKIFGHNTSLFLHKALHTADKPYECEECDKVFSRKSHLETHKIIYTGGKPYKCKVCDKAFTCNSYLAKHTIIHTGEKPYKCNECGKVFNRLSTLARHRRLHTGEKPYECEECEKVFSRKSHLERHKRIHTGEKPYKCKVCDKAFAYNSYLAKHSIIHTGEKPYKCNECGKVFNQQSTLARHHRLHTAEKPYKCEECDKVFRCKSHLERHRRIHTGEKPYKCKVCDKAFRSDSCLTEHQRVHTGEKPYMCNECGKVFSTKANLACHHKLHTAEKPYKCEECEKVFSRKSHMERHRRIHTGEKPYKCKVCDKAFRRDSHLAQHQRVHTGEKPYKCNECGKTFRQTSSLIIHRRLHTGEKPYKCNECGKTFSQMSSLVYHHRLHSGEKPYKCNECGKVFNQQAHLAQHQRVHTGEKPYKCNECGKTFSQMSNLVYHHRLHSGEKP"
            },
            "existence": 0,
            "relevance": 1,
            "proteinID": 2699390085
        }
    ],
    "singleCellExpressions": {
        "cellSignificanceIndex": []
    }
}