Details for: TBRG4
Gene ID: 9238
Gene Type: Protein-coding - A gene that serves as a template for producing a messenger RNA (mRNA) molecule, which is then translated into a functional protein.
Symbol: TBRG4
Ensembl ID: ENSG00000136270
Description: transforming growth factor beta regulator 4
Selected Context(s): Overall
Cell Significance Landscape
Associated with
Significant Cells
Cell Significance Index (CSI) scores for the chosen context(s)
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CSI 5.79rCSI 4.46%PRS 92.32
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CSI 4.96rCSI 5.83%PRS 89.49
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CSI 4.88rCSI 6.68%PRS 92.4
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CSI 4.06rCSI 5.04%PRS 89.1
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CSI 3.94rCSI 3.31%PRS 96.71
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CSI 3.22rCSI 2.24%PRS 97.32
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CSI 3.08rCSI 5.53%PRS 83.98
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CSI 3rCSI 2.33%PRS 91.96
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CSI 2.95rCSI 2.06%PRS 92.35
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CSI 2.89rCSI 2.69%PRS 90.42
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CSI 2.8rCSI 2.21%PRS 81.62
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CSI 2.53rCSI 2.28%PRS 88.15
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CSI 2.48rCSI 2.05%PRS 90.88
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CSI 2.47rCSI 8.94%PRS 97.93
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CSI 2.46rCSI 2.64%PRS 90.73
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CSI 2.33rCSI 2.07%PRS 86.7
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CSI 2.31rCSI 1.54%PRS 90.94
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CSI 2.24rCSI 8.7%PRS 86.56
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CSI 2.22rCSI 1.8%PRS 90.77
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CSI 2.21rCSI 3.34%PRS 93.22
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CSI 2.17rCSI 1.82%PRS 89.92
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CSI 2.17rCSI 2.6%PRS 87.96
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CSI 2.14rCSI 3.09%PRS 91.89
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CSI 2.12rCSI 3.24%PRS 86.11
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CSI 2.04rCSI 1.77%PRS 91.52
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CSI 2.01rCSI 3.11%PRS 87.54
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CSI 2rCSI 1.84%PRS 90.31
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CSI 1.97rCSI 1.9%PRS 84.85
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CSI 1.94rCSI 2.97%PRS 92.86
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CSI 1.88rCSI 1.41%PRS 92.66
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CSI 1.88rCSI 1.97%PRS 86.87
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CSI 1.87rCSI 2.32%PRS 87.65
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CSI 1.87rCSI 1.8%PRS 87.89
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CSI 1.83rCSI 1.61%PRS 80.39
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CSI 1.77rCSI 1.86%PRS 86.8
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CSI 1.74rCSI 2.42%PRS 87.77
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CSI 1.73rCSI 2.35%PRS 82.61
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CSI 1.55rCSI 1.99%PRS 85.81
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CSI 1.54rCSI 1.78%PRS 83.47
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CSI 1.51rCSI 3.83%PRS 84.02
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CSI 1.48rCSI 2.17%PRS 84.54
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CSI 1.43rCSI 2.52%PRS 74.85
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CSI 1.34rCSI 1.8%PRS 86.63
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CSI 1.34rCSI 2.96%PRS 89.16
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CSI 0.56rCSI 3.22%PRS 91.66
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CSI 0.55rCSI 2.99%PRS 91.7
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this specific cell.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Cell Significance Index to the Cell Significance Index Threshold, indicating how much the gene expression has changed compared to a baseline.
Cell Significance Index: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Network Configuration
Explore relationships of the current gene. Select an Interaction Source: 'ONTOLOGY' for shared pathways (GO/Reactome) or 'STRING' for protein-protein interactions. Further refine by selecting context genes and comparing Cell Significance Index (CSI) scores between baseline and target cell types and their specific contexts.
Legend:
- Query Gene
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Node Color (Target Cell CSI, relative to current network):
- Very High
- High
- Medium
- Low
- Very Low
- CSI N/A
- Node Size: Proportional to Target Cell CSI magnitude
- STRING PPI Edge
- Shared Pathway Edge (ONTOLOGY)
Other Information
This section provides additional information about the gene, including a description generated by an AI language model and details about associated proteins.
Genular Protein ID: 1317577111
Symbol: FAKD4_HUMAN
Name: Cell cycle progression restoration protein 2
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10231032
Title: Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
PubMed ID: 10231032
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 12690205
Title: Human chromosome 7: DNA sequence and biology.
PubMed ID: 12690205
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9383053
Title: Human CPR (cell cycle progression restoration) genes impart a Far-phenotype on yeast cells.
PubMed ID: 9383053
PubMed ID: 12759187
Title: Pig whey acidic protein gene is surrounded by two ubiquitously expressed genes.
PubMed ID: 12759187
PubMed ID: 18691976
Title: Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle.
PubMed ID: 18691976
PubMed ID: 19608861
Title: Lysine acetylation targets protein complexes and co-regulates major cellular functions.
PubMed ID: 19608861
PubMed ID: 20869947
Title: Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration.
PubMed ID: 20869947
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 22814378
Title: N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.
PubMed ID: 22814378
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 25944712
Title: N-terminome analysis of the human mitochondrial proteome.
PubMed ID: 25944712
PubMed ID: 28335001
Title: FASTKD1 and FASTKD4 have opposite effects on expression of specific mitochondrial RNAs, depending upon their endonuclease-like RAP domain.
PubMed ID: 28335001
DOI: 10.1093/nar/gkx164
Sequence Information:
- Length: 631
- Mass: 70738
- Checksum: 4EFC3AF5D5BBABD3
- Sequence:
MAAHLVKRCT CLLREAARQA PAMAPVGRLR LAWVAHKTLT SSATSPISHL PGSLMEPVEK ERASTPYIEK QVDHLIKKAT RPEELLELLG GSHDLDSNQA AMVLIRLSHL LSEKPEDKGL LIQDAHFHQL LCLLNSQIAS VWHGTLSKLL GSLYALGIPK ASKELQSVEQ EVRWRMRKLK YKHLAFLAES CATLSQEQHS QELLAELLTH LERRWTEIED SHTLVTVMMK VGHLSEPLMN RLEDKCLELV EHFGPNELRK VLVMLAAQSR RSVPLLRAIS YHLVQKPFSL TKDVLLDVAY AYGKLSFHQT QVSQRLATDL LSLMPSLTSG EVAHCAKSFA LLKWLSLPLF EAFAQHVLNR AQDITLPHLC SVLLAFARLN FHPDQEDQFF SLVHEKLGSE LPGLEPALQV DLVWALCVLQ QAREAELQAV LHPEFHIQFL GGKSQKDQNT FQKLLHINAT ALLEYPEYSG PLLPASAVAP GPSALDRKVT PLQKELQETL KGLLGSADKG SLEVATQYGW VLDAEVLLDS DGEFLPVRDF VAPHLAQPTG SQSPPPGSKR LAFLRWEFPN FNSRSKDLLG RFVLARRHIV AAGFLIVDVP FYEWLELKSE WQKGAYLKDK MRKAVAEELA K
Genular Protein ID: 3061943076
Symbol: B3KM73_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
Sequence Information:
- Length: 493
- Mass: 55111
- Checksum: CEDDCDF1986358D9
- Sequence:
MAAHLVKRCT CLLREAARQA PAMAPVGRLR LAWVAHKTLT SSATSPISHL PGSLMEPVEK ERASTPYIEK QVDHLIKKAT RPEELLELLG GSHDLDSNQA AMVLIRLSHL LSEKPEDKGL LIQDAHFHQL LCLLNSQIAS VWHGTLSKLL GSLYALGIPK ASKELQSVEQ EVRWRMRKLK YKHLAFLAES CATLSQEQHS QELLAELLTH LERRWTEIED SHTLVTVMMK VGHLSEPLMN RLEDKHVLNR AQDITLPHLC SVLLAFARLN FHPDQEDQFF SLVHEKLGSE LPGLEPALQV DLVWALCVLQ QAREAELQAV LHPEFHIQFL GGKSQKDQNT FQKLLHINAT ALLEYPEYSG PLLPASAVAP GPSALDRKVT PLQKELQETL KGLLGSADKG SLEVATQYGW VLDAEVLLDS DGEFLPVRDF VAPHLAQPTG SQSPPPGSKR LAFLRWEFPN FNSRSKDLLG RFVLARRHIV AAGFLIVDVP FYE
Genular Protein ID: 2507516224
Symbol: B3KRS4_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
Sequence Information:
- Length: 456
- Mass: 51368
- Checksum: 19D4B1AC5A47BA75
- Sequence:
MRKLKYKHLA FLAESCATLS QEQHSQELLA ELLTHLERRW TEIEDSHTLV TVMMKVGHLS EPLMNRLEDK CLELVEHFGP NELRKVLVML AAQSRRSVPL LRAISYHLVQ KPFSLTKDVL LDVAYAYGKL SFHQTQVSQR LATDLLSLMP SLTSGEVAHC AKSFALLKWL SLPLFEAFAQ HVLNRAQDIT LPHLCSVLLA FARLNFHPDQ EDQFFSLVHE KLGSELPGLE PALQVDLVWA LCVLQQAREA ELQAVLHPEF HIQFLGGKSQ KDQNTFQKLL HINATALLEY PEYSGPLLPA SAVAPGPSAL DRKVTPLQKE LQETLKGLLG SADKGSLEVA TQYGWVLDAE VLLDSDGEFL PVRDFVAPHL AQPTGSQSPP PGSKRLAFLR WEFPNFNSRS KDLLGRFVLA RRHIVAAGFL IVDVPFYEWL ELKSEWQKGA YLKDKMRKAV AEELAK
Genular Protein ID: 241452161
Symbol: B4DU42_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 642
- Mass: 71857
- Checksum: 45827D7868344AF0
- Sequence:
MEVSGGARCD IMAAHLVKRC TCLLREAARQ APAMAPVGRL RLAWVAHKTL TSSATSPISH LPGSLMEPVE KERASTPYIE KQVDHLIKKA TRPEELLELL GGSHDLDSNQ AAMVLIRLSH LLSEKPEDKG LLIQDAHFHQ LLCLLNSQIA SVWHGTLSKL LGSLYALGIP KASKELQSVE QEVRWRMRKL KYKHLAFLAE SCATLSQEQH SQELLAELLT HLERRWTEIE DSHTLVTVMM KVGHLSEPLM NRLEDKCLEL VEHFGPNELR KVLVMLAAQS RRSVPLLRAI SYHLVQKPFS LTKDVLLDVA YAYGKLSFHQ TQVSQRLATD LLSLMPSLTS GEVAHCAKSF ALLKWLSLPL FEAFAQHVLN RAQDITLPHL CSVLLAFARL NFHPDQEDQF FSLVHEKLGS ELPGLEPALQ VDLVWALCVL QQAREAELQA VLHPEFHIQF LGGKSQKDQN TFQKLLHINA TALLEYPEYS GPLLPASAVA PGPSALDRKV TPLQKELQET LKGLLGSADK GSLEVATQYG WVLDAEVLLD SDGEFLPVRD FVAPHLAQPT GSQSPPPGSK RLAFLRWEFP NFNSRSKDLL GRFVLARRHI VAAGFLIVDV PFYEWLELKS EWQKGAYLKD KMRKAVAEEL AK