Details for: CL0011012

Cell ID: CL0011012

Cell Name: neural crest cell

Marker Score Threshold: 1069
(Derived using integrated single-cell and genomic data)

Description: A cell of the neural crest. Neural crest cells are multipotent. Premigratory neural crest cells are found at the neural plate boarder, some of which will undergo ectomesynchymal transition and delamination to form migratory neural crest cells.

Genes (max top 100)

(Marker Score score is uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Gene Symbol: BTF3 (ENSG00000145741)
    Fold Change: 2.69
    Ensembl ID: ENSG00000145741
  • Gene Symbol: ATP5MC2 (ENSG00000135390)
    Fold Change: 2.69
    Ensembl ID: ENSG00000135390
  • Gene Symbol: ACTB (ENSG00000075624)
    Fold Change: 2.67
    Ensembl ID: ENSG00000075624
  • Gene Symbol: CALM2 (ENSG00000143933)
    Fold Change: 2.66
    Ensembl ID: ENSG00000143933
  • Gene Symbol: ACTG1 (ENSG00000184009)
    Fold Change: 2.64
    Ensembl ID: ENSG00000184009
  • Gene Symbol: SLC25A6 (ENSG00000169100)
    Fold Change: 2.64
    Ensembl ID: ENSG00000169100
  • Gene Symbol: ATP5F1A (ENSG00000152234)
    Fold Change: 2.62
    Ensembl ID: ENSG00000152234
  • Gene Symbol: ZFP36L1 (ENSG00000185650)
    Fold Change: 2.62
    Ensembl ID: ENSG00000185650
  • Gene Symbol: ATP5PO (ENSG00000241837)
    Fold Change: 2.59
    Ensembl ID: ENSG00000241837
  • Gene Symbol: ATP5F1E (ENSG00000124172)
    Fold Change: 2.56
    Ensembl ID: ENSG00000124172
  • Gene Symbol: ATP5F1B (ENSG00000110955)
    Fold Change: 2.55
    Ensembl ID: ENSG00000110955
  • Gene Symbol: BSG (ENSG00000172270)
    Fold Change: 2.53
    Ensembl ID: ENSG00000172270
  • Gene Symbol: TMEM258 (ENSG00000134825)
    Fold Change: 2.53
    Ensembl ID: ENSG00000134825
  • Gene Symbol: ATP5MC3 (ENSG00000154518)
    Fold Change: 2.53
    Ensembl ID: ENSG00000154518
  • Gene Symbol: ALDOA (ENSG00000149925)
    Fold Change: 2.53
    Ensembl ID: ENSG00000149925
  • Gene Symbol: APEX1 (ENSG00000100823)
    Fold Change: 2.48
    Ensembl ID: ENSG00000100823
  • Gene Symbol: BTG1 (ENSG00000133639)
    Fold Change: 2.46
    Ensembl ID: ENSG00000133639
  • Gene Symbol: ATP5PF (ENSG00000154723)
    Fold Change: 2.45
    Ensembl ID: ENSG00000154723
  • Gene Symbol: SLC25A5 (ENSG00000005022)
    Fold Change: 2.44
    Ensembl ID: ENSG00000005022
  • Gene Symbol: ASCL1 (ENSG00000139352)
    Fold Change: 2.39
    Ensembl ID: ENSG00000139352
  • Gene Symbol: ATP5ME (ENSG00000169020)
    Fold Change: 2.37
    Ensembl ID: ENSG00000169020
  • Gene Symbol: ATP5F1C (ENSG00000165629)
    Fold Change: 2.34
    Ensembl ID: ENSG00000165629
  • Gene Symbol: DST (ENSG00000151914)
    Fold Change: 2.34
    Ensembl ID: ENSG00000151914
  • Gene Symbol: ATP5F1D (ENSG00000099624)
    Fold Change: 2.33
    Ensembl ID: ENSG00000099624
  • Gene Symbol: RHOA (ENSG00000067560)
    Fold Change: 2.3
    Ensembl ID: ENSG00000067560
  • Gene Symbol: CALD1 (ENSG00000122786)
    Fold Change: 2.29
    Ensembl ID: ENSG00000122786
  • Gene Symbol: CALM3 (ENSG00000160014)
    Fold Change: 2.29
    Ensembl ID: ENSG00000160014
  • Gene Symbol: ATP5PB (ENSG00000116459)
    Fold Change: 2.26
    Ensembl ID: ENSG00000116459
  • Gene Symbol: APP (ENSG00000142192)
    Fold Change: 2.24
    Ensembl ID: ENSG00000142192
  • Gene Symbol: PARP1 (ENSG00000143799)
    Fold Change: 2.17
    Ensembl ID: ENSG00000143799
  • Gene Symbol: CALR (ENSG00000179218)
    Fold Change: 2.1
    Ensembl ID: ENSG00000179218
  • Gene Symbol: C1QBP (ENSG00000108561)
    Fold Change: 2.1
    Ensembl ID: ENSG00000108561
  • Gene Symbol: ARF1 (ENSG00000143761)
    Fold Change: 2.08
    Ensembl ID: ENSG00000143761
  • Gene Symbol: B2M (ENSG00000166710)
    Fold Change: 2.07
    Ensembl ID: ENSG00000166710
  • Gene Symbol: ATF4 (ENSG00000128272)
    Fold Change: 2.07
    Ensembl ID: ENSG00000128272
  • Gene Symbol: ADH5 (ENSG00000197894)
    Fold Change: 2.06
    Ensembl ID: ENSG00000197894
  • Gene Symbol: ACP1 (ENSG00000143727)
    Fold Change: 2.06
    Ensembl ID: ENSG00000143727
  • Gene Symbol: ATP1B3 (ENSG00000069849)
    Fold Change: 2.06
    Ensembl ID: ENSG00000069849
  • Gene Symbol: ZFP36L2 (ENSG00000152518)
    Fold Change: 2.05
    Ensembl ID: ENSG00000152518
  • Gene Symbol: CALM1 (ENSG00000198668)
    Fold Change: 2.02
    Ensembl ID: ENSG00000198668
  • Gene Symbol: BCHE (ENSG00000114200)
    Fold Change: 1.98
    Ensembl ID: ENSG00000114200
  • Gene Symbol: ATP5MC1 (ENSG00000159199)
    Fold Change: 1.93
    Ensembl ID: ENSG00000159199
  • Gene Symbol: ATRX (ENSG00000085224)
    Fold Change: 1.93
    Ensembl ID: ENSG00000085224
  • Gene Symbol: ARF4 (ENSG00000168374)
    Fold Change: 1.85
    Ensembl ID: ENSG00000168374
  • Gene Symbol: AHCY (ENSG00000101444)
    Fold Change: 1.81
    Ensembl ID: ENSG00000101444
  • Gene Symbol: RHOB (ENSG00000143878)
    Fold Change: 1.79
    Ensembl ID: ENSG00000143878
  • Gene Symbol: RHOC (ENSG00000155366)
    Fold Change: 1.78
    Ensembl ID: ENSG00000155366
  • Gene Symbol: AKR1B1 (ENSG00000085662)
    Fold Change: 1.77
    Ensembl ID: ENSG00000085662
  • Gene Symbol: ARL3 (ENSG00000138175)
    Fold Change: 1.67
    Ensembl ID: ENSG00000138175
  • Gene Symbol: ARF5 (ENSG00000004059)
    Fold Change: 1.67
    Ensembl ID: ENSG00000004059
  • Gene Symbol: ANXA5 (ENSG00000164111)
    Fold Change: 1.66
    Ensembl ID: ENSG00000164111
  • Gene Symbol: APRT (ENSG00000198931)
    Fold Change: 1.65
    Ensembl ID: ENSG00000198931
  • Gene Symbol: CCND1 (ENSG00000110092)
    Fold Change: 1.64
    Ensembl ID: ENSG00000110092
  • Gene Symbol: CALU (ENSG00000128595)
    Fold Change: 1.61
    Ensembl ID: ENSG00000128595
  • Gene Symbol: ATOX1 (ENSG00000177556)
    Fold Change: 1.6
    Ensembl ID: ENSG00000177556
  • Gene Symbol: ATP6V0B (ENSG00000117410)
    Fold Change: 1.57
    Ensembl ID: ENSG00000117410
  • Gene Symbol: PTTG1IP (ENSG00000183255)
    Fold Change: 1.55
    Ensembl ID: ENSG00000183255
  • Gene Symbol: ADD3 (ENSG00000148700)
    Fold Change: 1.54
    Ensembl ID: ENSG00000148700
  • Gene Symbol: BNIP3L (ENSG00000104765)
    Fold Change: 1.53
    Ensembl ID: ENSG00000104765
  • Gene Symbol: BNIP3 (ENSG00000176171)
    Fold Change: 1.53
    Ensembl ID: ENSG00000176171
  • Gene Symbol: BIRC5 (ENSG00000089685)
    Fold Change: 1.47
    Ensembl ID: ENSG00000089685
  • Gene Symbol: BAG1 (ENSG00000107262)
    Fold Change: 1.47
    Ensembl ID: ENSG00000107262
  • Gene Symbol: ARHGDIA (ENSG00000141522)
    Fold Change: 1.46
    Ensembl ID: ENSG00000141522
  • Gene Symbol: ANXA2 (ENSG00000182718)
    Fold Change: 1.44
    Ensembl ID: ENSG00000182718
  • Gene Symbol: ADSL (ENSG00000239900)
    Fold Change: 1.43
    Ensembl ID: ENSG00000239900
  • Gene Symbol: APLP2 (ENSG00000084234)
    Fold Change: 1.42
    Ensembl ID: ENSG00000084234
  • Gene Symbol: ACTL6A (ENSG00000136518)
    Fold Change: 1.38
    Ensembl ID: ENSG00000136518
  • Gene Symbol: AK2 (ENSG00000004455)
    Fold Change: 1.38
    Ensembl ID: ENSG00000004455
  • Gene Symbol: ATP2B1 (ENSG00000070961)
    Fold Change: 1.35
    Ensembl ID: ENSG00000070961
  • Gene Symbol: ACTA2 (ENSG00000107796)
    Fold Change: 1.34
    Ensembl ID: ENSG00000107796
  • Gene Symbol: AUP1 (ENSG00000115307)
    Fold Change: 1.34
    Ensembl ID: ENSG00000115307
  • Gene Symbol: AMD1 (ENSG00000123505)
    Fold Change: 1.34
    Ensembl ID: ENSG00000123505
  • Gene Symbol: BAX (ENSG00000087088)
    Fold Change: 1.33
    Ensembl ID: ENSG00000087088
  • Gene Symbol: BIN1 (ENSG00000136717)
    Fold Change: 1.32
    Ensembl ID: ENSG00000136717
  • Gene Symbol: ALDH1A1 (ENSG00000165092)
    Fold Change: 1.31
    Ensembl ID: ENSG00000165092
  • Gene Symbol: ALDH7A1 (ENSG00000164904)
    Fold Change: 1.3
    Ensembl ID: ENSG00000164904
  • Gene Symbol: ACADM (ENSG00000117054)
    Fold Change: 1.24
    Ensembl ID: ENSG00000117054
  • Gene Symbol: ATP1A1 (ENSG00000163399)
    Fold Change: 1.24
    Ensembl ID: ENSG00000163399
  • Gene Symbol: BCAT1 (ENSG00000060982)
    Fold Change: 1.21
    Ensembl ID: ENSG00000060982
  • Gene Symbol: TLE5 (ENSG00000104964)
    Fold Change: 1.19
    Ensembl ID: ENSG00000104964
  • Gene Symbol: ACTG2 (ENSG00000163017)
    Fold Change: 1.18
    Ensembl ID: ENSG00000163017
  • Gene Symbol: BCL7A (ENSG00000110987)
    Fold Change: 1.18
    Ensembl ID: ENSG00000110987
  • Gene Symbol: AAMP (ENSG00000127837)
    Fold Change: 1.16
    Ensembl ID: ENSG00000127837
  • Gene Symbol: ARL2 (ENSG00000213465)
    Fold Change: 1.16
    Ensembl ID: ENSG00000213465
  • Gene Symbol: ADD1 (ENSG00000087274)
    Fold Change: 1.14
    Ensembl ID: ENSG00000087274
  • Gene Symbol: ACVR2B (ENSG00000114739)
    Fold Change: 1.13
    Ensembl ID: ENSG00000114739
  • Gene Symbol: ARHGAP5 (ENSG00000100852)
    Fold Change: 1.13
    Ensembl ID: ENSG00000100852
  • Gene Symbol: RERE (ENSG00000142599)
    Fold Change: 1.13
    Ensembl ID: ENSG00000142599
  • Gene Symbol: VPS51 (ENSG00000149823)
    Fold Change: 1.12
    Ensembl ID: ENSG00000149823
  • Gene Symbol: ACTN4 (ENSG00000130402)
    Fold Change: 1.12
    Ensembl ID: ENSG00000130402
  • Gene Symbol: ATP1B1 (ENSG00000143153)
    Fold Change: 1.11
    Ensembl ID: ENSG00000143153
  • Gene Symbol: ARF6 (ENSG00000165527)
    Fold Change: 1.09
    Ensembl ID: ENSG00000165527
  • Gene Symbol: GET3 (ENSG00000198356)
    Fold Change: 1.09
    Ensembl ID: ENSG00000198356
  • Gene Symbol: BAD (ENSG00000002330)
    Fold Change: 1.08
    Ensembl ID: ENSG00000002330
  • Gene Symbol: ACAT2 (ENSG00000120437)
    Fold Change: 1.07
    Ensembl ID: ENSG00000120437
  • Gene Symbol: ZFHX3 (ENSG00000140836)
    Fold Change: 1.06
    Ensembl ID: ENSG00000140836
  • Gene Symbol: CALCB (ENSG00000175868)
    Fold Change: 1.04
    Ensembl ID: ENSG00000175868
  • Gene Symbol: ACYP1 (ENSG00000119640)
    Fold Change: 1.03
    Ensembl ID: ENSG00000119640
  • Gene Symbol: ATIC (ENSG00000138363)
    Fold Change: 1.01
    Ensembl ID: ENSG00000138363
  • Gene Symbol: ABCF1 (ENSG00000204574)
    Fold Change: 1
    Ensembl ID: ENSG00000204574
Hovered Details

Hover over a box to see details here...

Hovered Details

Hover over a box to see details here...

**Key Characteristics** 1. **Multipotency**: Neural crest cells have the ability to differentiate into multiple cell types, including neurons, glial cells, and pigment cells. 2. **Location**: Neural crest cells are found at the neural plate border during embryonic development. 3. **Genetic Profile**: The cell's genetic profile is characterized by the presence of genes involved in cellular processes such as protein transport, metabolism, and cell signaling. 4. **Gene Symbol**: The gene symbol for this cell type is CL0011012. 5. **Ensembl ID**: The Ensembl ID for this cell type is ENSG00000145741. **Clinical Significance** 1. **Neurological Disorders**: Neural crest cells play a crucial role in the development of the nervous system, and abnormalities in these cells have been implicated in various neurological disorders, including autism, schizophrenia, and Alzheimer's disease. 2. **Cancer**: Neural crest cells have been implicated in the development of certain types of cancer, including melanoma and neuroblastoma. 3. **Developmental Abnormalities**: Abnormalities in neural crest cells have been linked to developmental abnormalities, including cleft palate and heart defects. 4. **Regenerative Medicine**: Neural crest cells have the potential to be used in regenerative medicine to repair or replace damaged tissues, including those in the nervous system. **Pathways/Ontology** 1. **Cytoplasm, Cytosol**: The cell's cytoplasm and cytosol are involved in various cellular processes, including protein transport and metabolism. 2. **In utero embryonic development**: The cell's genetic profile is involved in the development of the embryo during in utero development. 3. **Nascent polypeptide-associated complex**: The cell's genetic profile is involved in the formation of the nascent polypeptide-associated complex, which is involved in protein synthesis. 4. **Negative regulation of protein localization to endoplasmic reticulum**: The cell's genetic profile is involved in the negative regulation of protein localization to the endoplasmic reticulum. 5. **Protein binding**: The cell's genetic profile is involved in protein binding, which is a crucial step in various cellular processes. **Gene Symbol and Ensembl ID** 1. **Gene Symbol**: ATP5MC2 2. **Ensembl ID**: ENSG00000135390 **Pathways/Ontology** 1. **Cristae formation**: The cell's genetic profile is involved in the formation of cristae, which are involved in the production of ATP. 2. **Formation of ATP by chemiosmotic coupling**: The cell's genetic profile is involved in the formation of ATP by chemiosmotic coupling. 3. **Lipid binding**: The cell's genetic profile is involved in lipid binding, which is a crucial step in various cellular processes. 4. **Metabolism**: The cell's genetic profile is involved in metabolism, which is the process by which cells convert energy. 5. **Mitochondrial biogenesis and maintenance**: The cell's genetic profile is involved in mitochondrial biogenesis and maintenance, which are crucial steps in the production of ATP. **Gene Symbol and Ensembl ID** 1. **Gene Symbol**: ACTB 2. **Ensembl ID**: ENSG00000075624 **Pathways/Ontology** 1. **Actin cytoskeleton**: The cell's genetic profile is involved in the formation of the actin cytoskeleton, which is a crucial component of cell structure and function. 2. **Apical junction complex**: The cell's genetic profile is involved in the formation of the apical junction complex, which is involved in cell-cell adhesion. 3. **Adherens junction assembly**: The cell's genetic profile is involved in the assembly of adherens junctions, which are involved in cell-cell adhesion. 4. **Apical protein localization**: The cell's genetic profile is involved in the localization of apical proteins, which are involved in cell-cell adhesion. 5. **Protein binding**: The cell's genetic profile is involved in protein binding, which is a crucial step in various cellular processes. **Gene Symbol and Ensembl ID** 1. **Gene Symbol**: CALM2 2. **Ensembl ID**: ENSG00000143933 **Pathways/Ontology** 1. **Adenylate cyclase activator activity**: The cell's genetic profile is involved in the activation of adenylate cyclase, which is a crucial step in signal transduction. 2. **Adenylate cyclase binding**: The cell's genetic profile is involved in the binding of adenylate cyclase, which is a crucial step in signal transduction. 3. **Calcium-dependent protein binding**: The cell's genetic profile is involved in the binding of calcium-dependent proteins, which are involved in signal transduction. 4. **Calcium channel complex**: The cell's genetic profile is involved in the formation of calcium channels, which are involved in signal transduction. 5. **Calcium ion binding**: The cell's genetic profile is involved in the binding of calcium ions, which are involved in signal transduction.